RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 TACR1P25103 407 aa7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 EIF6P56537 245 aaKnown RBP7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 PPP2R5DQ14738 602 aa7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 SKOR2Q2VWA4 1001 aaPredicted RBP7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 GNPTABQ3T906 1256 aa7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 HEATR6Q6AI08 1181 aaKnown RBP7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 FRMD5Q7Z6J6 570 aa7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 OR6P1Q8NGX9 317 aa7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 EFR3BQ9Y2G0 817 aa7.39□□□□□ -1.23
PRPF40A-205ENST00000467114 A0A1W2PQH9 124 aa7.38□□□□□ -1.23
PRPF40A-205ENST00000467114 PLA2G1BP04054 148 aaKnown RBP7.38□□□□□ -1.23
PRPF40A-205ENST00000467114 HTRA3P83110 453 aa7.38□□□□□ -1.23
PRPF40A-205ENST00000467114 FOXO4P98177 505 aa7.38□□□□□ -1.23
PRPF40A-205ENST00000467114 SLC7A5Q01650 507 aa7.38□□□□□ -1.23
PRPF40A-205ENST00000467114 VWA3BQ502W6 1294 aa7.38□□□□□ -1.23
PRPF40A-205ENST00000467114 ADCY4Q8NFM4 1077 aa7.38□□□□□ -1.23
PRPF40A-205ENST00000467114 FNIP1Q8TF40 1166 aa7.38□□□□□ -1.23
PRPF40A-205ENST00000467114 GBP3Q9H0R5 595 aa7.38□□□□□ -1.23
PRPF40A-205ENST00000467114 EPHX1P07099 455 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 CELA3BP08861 270 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 NCAM1P13591 858 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 SLURP1P55000 103 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 ERICH6BQ5W0A0 696 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 ARHGEF39Q8N4T4 335 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 KLHL6Q8WZ60 621 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 GPRASP2Q96D09 838 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 RCC1LQ96I51 464 aaKnown RBP7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 TGIF2Q9GZN2 237 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 DBR1Q9UK59 544 aaKnown RBP7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 PCDHB10Q9UN67 800 aa7.37□□□□□ -1.23
PRPF40A-205ENST00000467114 STXBP3O00186 592 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 VAMP4O75379 141 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 PPM1BO75688 479 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 ASGR2P07307 311 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 KCNC1P48547 511 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 GRB10Q13322 594 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 SAPCD2Q86UD0 394 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 TSPAN17Q96FV3 270 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 ADAM7Q9H2U9 754 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 CGGBP1Q9UFW8 167 aaPredicted RBP7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 SUSD2Q9UGT4 822 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 PMF1-BGLAPU3KQ54 211 aa7.36□□□□□ -1.23
PRPF40A-205ENST00000467114 SH3D21A4FU49 640 aa7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 C2orf71A6NGG8 1288 aa7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 GJA8P48165 433 aa7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 ADAT2Q7Z6V5 191 aaKnown RBP7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 CABP7Q86V35 215 aa7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 LZTR1Q8N653 840 aa7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 FGD4Q96M96 766 aa7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 FBLN5Q9UBX5 448 aa7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 FAN1Q9Y2M0 1017 aa7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 BACE2Q9Y5Z0 518 aa7.35□□□□□ -1.23
PRPF40A-205ENST00000467114 PPP1R11O60927 126 aaPredicted RBP7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 SEPHS1P49903 392 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 AMPD2Q01433 879 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 DPY19L1Q2PZI1 675 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 LIPIQ6XZB0 460 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 B3GNT8Q7Z7M8 397 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 ZNF513Q8N8E2 541 aaPredicted RBP7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 NETO2Q8NC67 525 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 ALG3Q92685 438 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 SHDQ96IW2 340 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 MTA3Q9BTC8 594 aa7.34□□□□□ -1.23
PRPF40A-205ENST00000467114 MC3RP41968 323 aa7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 CASP7P55210 303 aa7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 DLX2Q07687 328 aaPredicted RBP7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 SLC9A5Q14940 896 aa7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 ZFYVE27Q5T4F4 411 aa7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 PRRT2Q7Z6L0 340 aaPredicted RBP7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 NPM2Q86SE8 214 aaKnown RBP7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 ADGRG2Q8IZP9 1017 aa7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 ACBD3Q9H3P7 528 aa7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 JAG2Q9Y219 1238 aa7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 RWDD3Q9Y3V2 267 aa7.33□□□□□ -1.24
PRPF40A-205ENST00000467114 TRBV23OR9-2A0A075B6M9 112 aa7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 PAMP19021 973 aa7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 PMLP29590 882 aa7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 RBM10P98175 930 aaKnown RBP7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 DBX2Q6ZNG2 339 aa7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 ZNF526Q8TF50 670 aaPredicted RBP7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 CPA5Q8WXQ8 436 aa7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 PEX11GQ96HA9 241 aa7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 TINF2Q9BSI4 451 aa7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 RXFP1Q9HBX9 757 aa7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 NUDT5Q9UKK9 219 aa7.32□□□□□ -1.24
PRPF40A-205ENST00000467114 NPHP3-ACAD11A0A0J9YXS1 232 aa7.31□□□□□ -1.24
PRPF40A-205ENST00000467114 A0A1B0GTL3 188 aa7.31□□□□□ -1.24
PRPF40A-205ENST00000467114 ZBTB7AO95365 584 aa7.31□□□□□ -1.24
PRPF40A-205ENST00000467114 NFKB2Q00653 900 aa7.31□□□□□ -1.24
PRPF40A-205ENST00000467114 CPNE8Q86YQ8 564 aa7.31□□□□□ -1.24
PRPF40A-205ENST00000467114 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.31□□□□□ -1.24
PRPF40A-205ENST00000467114 ANKRD34BA5PLL1 514 aa7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 PRICKLE3O43900 615 aaPredicted RBP7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 ERCC5P28715 1186 aaPredicted RBP7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 NASPP49321 788 aaPredicted RBP7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 PPP2R5EQ16537 467 aa7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 WWC2Q6AWC2 1192 aa7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 KIAA1211LQ6NV74 962 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms