RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 PLCB4Q15147 1175 aa12.24□□□□□ -0.45
SFXN3-204ENST00000466982 RILPL1Q5EBL4 403 aa12.24□□□□□ -0.45
SFXN3-204ENST00000466982 EARS2Q5JPH6 523 aaKnown RBP12.24□□□□□ -0.45
SFXN3-204ENST00000466982 C1orf141Q5JVX7 400 aa12.24□□□□□ -0.45
SFXN3-204ENST00000466982 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
SFXN3-204ENST00000466982 IGDCC4Q8TDY8 1250 aa12.24□□□□□ -0.45
SFXN3-204ENST00000466982 TBC1D31Q96DN5 1066 aa12.24□□□□□ -0.45
SFXN3-204ENST00000466982 GSDMAQ96QA5 445 aa12.24□□□□□ -0.45
SFXN3-204ENST00000466982 DNAJC7Q99615 494 aa12.24□□□□□ -0.45
SFXN3-204ENST00000466982 STIM2Q9P246 746 aa12.24□□□□□ -0.45
SFXN3-204ENST00000466982 MYO5AQ9Y4I1 1855 aaKnown RBP12.23□□□□□ -0.45
SFXN3-204ENST00000466982 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 ZNF263O14978 683 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 SMNDC1O75940 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
SFXN3-204ENST00000466982 FAM107AO95990 144 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 GLI1P08151 1106 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 PLEKP08567 350 aaPredicted RBP12.23□□□□□ -0.45
SFXN3-204ENST00000466982 ZNF24P17028 368 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 SAFBQ15424 915 aaKnown RBP eCLIP12.23□□□□□ -0.45
SFXN3-204ENST00000466982 CCDC121Q6ZUS5 278 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 KIAA0825Q8IV33 1275 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 NELFBQ8WX92 580 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 IFT81Q8WYA0 676 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 CYFIP2Q96F07 1278 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 RBM41Q96IZ5 413 aaKnown RBP12.23□□□□□ -0.45
SFXN3-204ENST00000466982 ALS2CR12Q96Q35 445 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 NHEJ1Q9H9Q4 299 aaPredicted RBP12.23□□□□□ -0.45
SFXN3-204ENST00000466982 LRWD1Q9UFC0 647 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 GDAQ9Y2T3 454 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 ZPR1O75312 459 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 RNF8O76064 485 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 CDC25CP30307 473 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 SLC8A1P32418 973 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 TRIM14Q14142 442 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 CFAP58Q5T655 872 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 SFMBT2Q5VUG0 894 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
SFXN3-204ENST00000466982 EMBQ6PCB8 327 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 NBPF15Q8N660 670 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 MS4A14Q96JA4 679 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 MTRQ99707 1265 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 TRIM7Q9C029 511 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 YIPF3Q9GZM5 350 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 LY9Q9HBG7 655 aa12.23□□□□□ -0.45
SFXN3-204ENST00000466982 RBM12Q9NTZ6 932 aaKnown RBP12.23□□□□□ -0.45
SFXN3-204ENST00000466982 XDHP47989 1333 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 MOCS3O95396 460 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 ZAP70P43403 619 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 KRT83P78385 493 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 FOXO4P98177 505 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 SF3A3Q12874 501 aaKnown RBP eCLIP12.22□□□□□ -0.451e-7■■■□□ 16.1
SFXN3-204ENST00000466982 LRRC23Q53EV4 343 aaPredicted RBP12.22□□□□□ -0.45
SFXN3-204ENST00000466982 TMEM67Q5HYA8 995 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 ARL10Q8N8L6 244 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
SFXN3-204ENST00000466982 GOLGA6L7A0A1B0GV03 622 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 ANO9A1A5B4 782 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 PARP1P09874 1014 aaKnown RBP12.22□□□□□ -0.45
SFXN3-204ENST00000466982 PMS1P54277 932 aaKnown RBP12.22□□□□□ -0.45
SFXN3-204ENST00000466982 PAK1Q13153 545 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 IQCEQ6IPM2 695 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 MTHFD1LQ6UB35 978 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 BZW1Q7L1Q6 419 aaKnown RBP12.22□□□□□ -0.45
SFXN3-204ENST00000466982 KCNV2Q8TDN2 545 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 CAVIN3Q969G5 261 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 ZKSCAN3Q9BRR0 538 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 CORO1CQ9ULV4 474 aaPredicted RBP12.22□□□□□ -0.45
SFXN3-204ENST00000466982 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 WDR17Q8IZU2 1322 aa12.22□□□□□ -0.45
SFXN3-204ENST00000466982 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
SFXN3-204ENST00000466982 FERP16591 822 aa12.21□□□□□ -0.45
SFXN3-204ENST00000466982 CASP7P55210 303 aa12.21□□□□□ -0.45
SFXN3-204ENST00000466982 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
SFXN3-204ENST00000466982 PHC3Q8NDX5 983 aa12.21□□□□□ -0.45
SFXN3-204ENST00000466982 SHISA4Q96DD7 197 aa12.21□□□□□ -0.45
SFXN3-204ENST00000466982 TRIM4Q9C037 500 aa12.21□□□□□ -0.45
SFXN3-204ENST00000466982 PHACTR1Q9C0D0 580 aa12.21□□□□□ -0.45
SFXN3-204ENST00000466982 PAPOLBQ9NRJ5 636 aaKnown RBP12.21□□□□□ -0.45
SFXN3-204ENST00000466982 SLAIN2Q9P270 581 aa12.21□□□□□ -0.45
SFXN3-204ENST00000466982 CAPN11Q9UMQ6 739 aa12.21□□□□□ -0.45
SFXN3-204ENST00000466982 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 A6NNZ2 444 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 ATP6V1G1O75348 118 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 TMOD1P28289 359 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 PRCPP42785 496 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 SCNN1BP51168 640 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 DEUP1Q05D60 604 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 ITGB3BPQ13352 177 aaPredicted RBP12.21□□□□□ -0.46
SFXN3-204ENST00000466982 TUBB8Q3ZCM7 444 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 ANKRD20A8PQ5CZ79 823 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 CHADLQ6NUI6 762 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 C8orf74Q6P047 294 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 ANKRD13CQ8N6S4 541 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 EHBP1Q8NDI1 1231 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 TRIM58Q8NG06 486 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 APPBP2Q92624 585 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 PURBQ96QR8 312 aaKnown RBP12.21□□□□□ -0.46
SFXN3-204ENST00000466982 EPB41L5Q9HCM4 733 aa12.21□□□□□ -0.46
SFXN3-204ENST00000466982 DNAAF2Q9NVR5 837 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms