RNA–Protein interactions for RNA: ENST00000466881.1

PLOD3-211, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-211ENST00000466881 NDUFB10O96000 172 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 BMP3P12645 472 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 CALML3P27482 149 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 ECE1P42892 770 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 PRKG1Q13976 671 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 USP50Q70EL3 339 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-211ENST00000466881 CCDC84Q86UT8 332 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-211ENST00000466881 ADGRF4Q8IZF3 695 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 SPICE1Q8N0Z3 855 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 ABHD8Q96I13 439 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 NUP88Q99567 741 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-211ENST00000466881 PHF20Q9BVI0 1012 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 FOXP1Q9H334 677 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-211ENST00000466881 RIOX1Q9H6W3 641 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 IL21Q9HBE4 155 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 SH3GLB2Q9NR46 395 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 PICK1Q9NRD5 415 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 GINM1Q9NU53 330 aa13.88□□□□□ -0.19
PLOD3-211ENST00000466881 IQCA1LA6NCM1 817 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 ADM5C9JUS6 153 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 GADD45BO75293 160 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-211ENST00000466881 U2AF2P26368 475 aaKnown RBP eCLIP13.87□□□□□ -0.19
PLOD3-211ENST00000466881 INPP5BP32019 993 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 NAPAP54920 295 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 SF3A1Q15459 793 aaKnown RBP13.87□□□□□ -0.19
PLOD3-211ENST00000466881 WWC2Q6AWC2 1192 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 KRT26Q7Z3Y9 468 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 NOSTRINQ8IVI9 506 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 FAM160A2Q8N612 972 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-211ENST00000466881 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 CCDC148Q8NFR7 591 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 PRR7Q8TB68 274 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 CCDC12Q8WUD4 166 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-211ENST00000466881 LEO1Q8WVC0 666 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-211ENST00000466881 GMCL1Q96IK5 515 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 USP28Q96RU2 1077 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 WRNIP1Q96S55 665 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 USB1Q9BQ65 265 aaKnown RBP13.87□□□□□ -0.19
PLOD3-211ENST00000466881 GZF1Q9H116 711 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-211ENST00000466881 SYNPO2Q9UMS6 1093 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 TMX2Q9Y320 296 aa13.87□□□□□ -0.19
PLOD3-211ENST00000466881 PNMA6FA0A0J9YX94 578 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 USP17L10C9JJH3 530 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 TMEM232C9JQI7 657 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 STXBP3O00186 592 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 MBD3O95983 291 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 ATP2B1P20020 1258 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 MLLT1Q03111 559 aaPredicted RBP13.86□□□□□ -0.19
PLOD3-211ENST00000466881 NR5A1Q13285 461 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 STK38Q15208 465 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 FTOQ9C0B1 505 aaKnown RBP eCLIP13.86□□□□□ -0.19
PLOD3-211ENST00000466881 JMJD4Q9H9V9 463 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 BARHL2Q9NY43 387 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 FZD1Q9UP38 647 aa13.86□□□□□ -0.19
PLOD3-211ENST00000466881 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
PLOD3-211ENST00000466881 LBX1P52954 281 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 UBE2HP62256 183 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 FAM83BQ5T0W9 1011 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 ANO1Q5XXA6 986 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 DLK2Q6UY11 383 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 SCYL3Q8IZE3 742 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 BLIDQ8IZY5 108 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 ZKSCAN4Q969J2 545 aaPredicted RBP13.85□□□□□ -0.19
PLOD3-211ENST00000466881 SHISA4Q96DD7 197 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 SPSB2Q99619 263 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 TAF1DQ9H5J8 278 aaPredicted RBP13.85□□□□□ -0.19
PLOD3-211ENST00000466881 VCPKMTQ9H867 229 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 C6orf50Q9HD87 102 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 PRDM9Q9NQV7 894 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 RTEL1Q9NZ71 1219 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 RCOR1Q9UKL0 485 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 NOL7Q9UMY1 257 aaKnown RBP13.85□□□□□ -0.19
PLOD3-211ENST00000466881 CLIC4Q9Y696 253 aa13.85□□□□□ -0.19
PLOD3-211ENST00000466881 POLR2AP24928 1970 aaKnown RBP13.85□□□□□ -0.19
PLOD3-211ENST00000466881 MYH15Q9Y2K3 1946 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 SMCO2A6NFE2 343 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 NF2P35240 595 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 ME1P48163 572 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 MCM6Q14566 821 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 KLHL40Q2TBA0 621 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 SYDE2Q5VT97 1194 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 GALNT17Q6IS24 598 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 PNMA8AQ86V59 439 aaPredicted RBP13.84□□□□□ -0.19
PLOD3-211ENST00000466881 GPT2Q8TD30 523 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 COA7Q96BR5 231 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 GLIS2Q9BZE0 524 aaPredicted RBP13.84□□□□□ -0.19
PLOD3-211ENST00000466881 AS3MTQ9HBK9 375 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 ZNF112Q9UJU3 913 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 PCDHA4Q9UN74 947 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 ATAD5Q96QE3 1844 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 ELP1O95163 1332 aa13.84□□□□□ -0.19
PLOD3-211ENST00000466881 POTECB2RU33 542 aa13.83□□□□□ -0.2
PLOD3-211ENST00000466881 hCG_1984214I3L0E3 225 aa13.83□□□□□ -0.2
PLOD3-211ENST00000466881 ZBTB5O15062 677 aa13.83□□□□□ -0.2
PLOD3-211ENST00000466881 PPP1R12BO60237 982 aaPredicted RBP13.83□□□□□ -0.2
PLOD3-211ENST00000466881 GNA11P29992 359 aa13.83□□□□□ -0.2
PLOD3-211ENST00000466881 SNAP25P60880 206 aa13.83□□□□□ -0.2
PLOD3-211ENST00000466881 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms