RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MRRFQ96E11 262 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-209ENST00000466862 TSPAN17Q96FV3 270 aa5.23□□□□□ -1.57
GTF3C3-209ENST00000466862 RCC1LQ96I51 464 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-209ENST00000466862 FGD4Q96M96 766 aa5.23□□□□□ -1.57
GTF3C3-209ENST00000466862 PWWP2AQ96N64 755 aa5.23□□□□□ -1.57
GTF3C3-209ENST00000466862 MTA3Q9BTC8 594 aa5.23□□□□□ -1.57
GTF3C3-209ENST00000466862 RNF38Q9H0F5 515 aa5.23□□□□□ -1.57
GTF3C3-209ENST00000466862 BACE2Q9Y5Z0 518 aa5.23□□□□□ -1.57
GTF3C3-209ENST00000466862 PPP1R11O60927 126 aaPredicted RBP5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 TBC1D8O95759 1140 aa5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 MC3RP41968 323 aa5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 CYP4F3Q08477 520 aa5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 C9orf131Q5VYM1 1079 aa5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 HEATR6Q6AI08 1181 aaKnown RBP5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 BICRALQ6AI39 1079 aa5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 CXorf38Q8TB03 319 aa5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 RELTQ969Z4 430 aa5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 CRBNQ96SW2 442 aa5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 TGIF2Q9GZN2 237 aa5.22□□□□□ -1.57
GTF3C3-209ENST00000466862 FOXD2O60548 495 aaPredicted RBP5.21□□□□□ -1.58
GTF3C3-209ENST00000466862 VAMP4O75379 141 aa5.21□□□□□ -1.58
GTF3C3-209ENST00000466862 ASGR2P07307 311 aa5.21□□□□□ -1.58
GTF3C3-209ENST00000466862 PRR5P85299 388 aa5.21□□□□□ -1.58
GTF3C3-209ENST00000466862 MBLAC2Q68D91 279 aa5.21□□□□□ -1.58
GTF3C3-209ENST00000466862 NETO2Q8NC67 525 aa5.21□□□□□ -1.58
GTF3C3-209ENST00000466862 COPS5Q92905 334 aa5.21□□□□□ -1.58
GTF3C3-209ENST00000466862 SEC16BQ96JE7 1060 aa5.21□□□□□ -1.58
GTF3C3-209ENST00000466862 ZC3H12DA2A288 527 aaKnown RBP5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 PFKLP17858 780 aa5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 AMPD2Q01433 879 aa5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 DPY19L1Q2PZI1 675 aa5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 SKOR2Q2VWA4 1001 aaPredicted RBP5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 SAPCD2Q86UD0 394 aa5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 FNIP1Q8TF40 1166 aa5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 ACBD3Q9H3P7 528 aa5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 STRIP2Q9ULQ0 834 aa5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 EMC9Q9Y3B6 208 aa5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 RWDD3Q9Y3V2 267 aa5.2□□□□□ -1.58
GTF3C3-209ENST00000466862 A0A1W2PQ27 194 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 A0A1W2PQ64 194 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 A0A1W2PQC6 194 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 A0A1W2PQD8 194 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 SH3D21A4FU49 640 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 ANKRD34BA5PLL1 514 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 C2orf71A6NGG8 1288 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 F8W031 263 aaPredicted RBP5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 PPM1BO75688 479 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 SASH1O94885 1247 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 PMLP29590 882 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 TRIM26Q12899 539 aaPredicted RBP5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 TARBP2Q15633 366 aaKnown RBP5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 KIAA1211LQ6NV74 962 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 VHLLQ6RSH7 139 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 LIPIQ6XZB0 460 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 B3GNT8Q7Z7M8 397 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 TEPSINQ96N21 525 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 ADAM7Q9H2U9 754 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 RXFP1Q9HBX9 757 aa5.19□□□□□ -1.58
GTF3C3-209ENST00000466862 C7orf72A4D263 438 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 SYN1P17600 705 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 SEPHS1P49903 392 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 ZNF143P52747 638 aaPredicted RBP5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 SLURP1P55000 103 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 FOXO4P98177 505 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 WWC2Q6AWC2 1192 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 FRMD5Q7Z6J6 570 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 CPNE8Q86YQ8 564 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 TRIM59Q8IWR1 403 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 Q8N1Y9 231 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 LZTR1Q8N653 840 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 CPA5Q8WXQ8 436 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 ALG3Q92685 438 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 MRGPRX3Q96LB0 322 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 BCAS3Q9H6U6 928 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 GULP1Q9UBP9 304 aa5.18□□□□□ -1.58
GTF3C3-209ENST00000466862 A0A1B0GTL3 188 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 NCAM1P13591 858 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 PAMP19021 973 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 ADGRG2Q8IZP9 1017 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 RGS22Q8NE09 1264 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 NPLOC4Q8TAT6 608 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 PLEKHO2Q8TD55 490 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 DPF3Q92784 378 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 MMP19Q99542 508 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 PMF1-BGLAPU3KQ54 211 aa5.17□□□□□ -1.58
GTF3C3-209ENST00000466862 TRBV23OR9-2A0A075B6M9 112 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 NPHP3-ACAD11A0A0J9YXS1 232 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 TBX1O43435 398 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 THBDP07204 575 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 ATF4P18848 351 aaPredicted RBP5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 NFKB2Q00653 900 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 SCRN1Q12765 414 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 PPP2R5EQ16537 467 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 ADAT2Q7Z6V5 191 aaKnown RBP5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 BVESQ8NE79 360 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 ZNF526Q8TF50 670 aaPredicted RBP5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 NOX5Q96PH1 765 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 LGR4Q9BXB1 951 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 NKX2-4Q9H2Z4 354 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms