RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 MAP3K10Q02779 954 aa23.08■■□□□ 1.28
CCDC78-207ENST00000466708 DNTTIP2Q5QJE6 756 aaKnown RBP23.08■■□□□ 1.28
CCDC78-207ENST00000466708 KLHL10Q6JEL2 608 aa23.08■■□□□ 1.28
CCDC78-207ENST00000466708 VSTM4Q8IW00 320 aa23.08■■□□□ 1.28
CCDC78-207ENST00000466708 TMEM39BQ9GZU3 492 aa23.08■■□□□ 1.28
CCDC78-207ENST00000466708 MYOZ2Q9NPC6 264 aa23.08■■□□□ 1.28
CCDC78-207ENST00000466708 DDX25Q9UHL0 483 aaKnown RBP23.08■■□□□ 1.28
CCDC78-207ENST00000466708 MYH7BA7E2Y1 1941 aa23.07■■□□□ 1.28
CCDC78-207ENST00000466708 NRDCO43847 1150 aa23.07■■□□□ 1.28
CCDC78-207ENST00000466708 SKILP12757 684 aa23.07■■□□□ 1.28
CCDC78-207ENST00000466708 ARID5BQ14865 1188 aa23.07■■□□□ 1.28
CCDC78-207ENST00000466708 MMTAG2Q9BU76 263 aaKnown RBP23.07■■□□□ 1.28
CCDC78-207ENST00000466708 SH2D4AQ9H788 454 aa23.07■■□□□ 1.28
CCDC78-207ENST00000466708 SAMSN1Q9NSI8 373 aaKnown RBP23.07■■□□□ 1.28
CCDC78-207ENST00000466708 RWDD2AQ9UIY3 292 aa23.07■■□□□ 1.28
CCDC78-207ENST00000466708 CD2APQ9Y5K6 639 aa23.07■■□□□ 1.28
CCDC78-207ENST00000466708 NFKBIEO00221 500 aa23.06■■□□□ 1.28
CCDC78-207ENST00000466708 SFPQP23246 707 aaKnown RBP eCLIP23.06■■□□□ 1.28
CCDC78-207ENST00000466708 CCZ1BP86790 482 aa23.06■■□□□ 1.28
CCDC78-207ENST00000466708 CCZ1P86791 482 aaPredicted RBP23.06■■□□□ 1.28
CCDC78-207ENST00000466708 MOXD1Q6UVY6 613 aa23.06■■□□□ 1.28
CCDC78-207ENST00000466708 CCDC47Q96A33 483 aaKnown RBP23.06■■□□□ 1.28
CCDC78-207ENST00000466708 STK17AQ9UEE5 414 aa23.06■■□□□ 1.28
CCDC78-207ENST00000466708 PGAP2Q9UHJ9 254 aa23.06■■□□□ 1.28
CCDC78-207ENST00000466708 LTBP3Q9NS15 1303 aa23.06■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L15C9J2P7 530 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L13C9JLJ4 530 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L11C9JVI0 530 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L18D6R9N7 530 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L22D6RA61 530 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L17D6RBQ6 530 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L19D6RCP7 530 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L20D6RJB6 530 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 RHOBTB3O94955 611 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 FOSP01100 380 aaPredicted RBP23.05■■□□□ 1.28
CCDC78-207ENST00000466708 STAT2P52630 851 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 ZNF280AP59817 542 aaPredicted RBP23.05■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L24Q0WX57 530 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 USP17L6PQ6QN14 398 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 SMYD4Q8IYR2 804 aaPredicted RBP23.05■■□□□ 1.28
CCDC78-207ENST00000466708 ANO3Q9BYT9 981 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 CYP3A7-CYP3A51PA0A087WV96 503 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 MEIS2O14770 477 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 CYP3A7P24462 503 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 CAP2P40123 477 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 PAK1Q13153 545 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 NBPF9Q3BBW0 867 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 CDKAL1Q5VV42 579 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 CTAGE1Q96RT6 745 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 PLIN2Q99541 437 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 C7orf25Q9BPX7 421 aa23.05■■□□□ 1.28
CCDC78-207ENST00000466708 KLRC4O43908 158 aa23.04■■□□□ 1.28
CCDC78-207ENST00000466708 PLA2G6O60733 806 aa23.04■■□□□ 1.28
CCDC78-207ENST00000466708 ECE1P42892 770 aa23.04■■□□□ 1.28
CCDC78-207ENST00000466708 TNFAIP1Q13829 316 aa23.04■■□□□ 1.28
CCDC78-207ENST00000466708 PRR12Q9ULL5 1215 aa23.04■■□□□ 1.28
CCDC78-207ENST00000466708 CTNND2Q9UQB3 1225 aa23.04■■□□□ 1.28
CCDC78-207ENST00000466708 R3HCC1Q9Y3T6 440 aaKnown RBP23.04■■□□□ 1.28
CCDC78-207ENST00000466708 STX17P56962 302 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 TPD52L1Q16890 204 aaPredicted RBP23.03■■□□□ 1.28
CCDC78-207ENST00000466708 KMT5BQ4FZB7 885 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 KRT79Q5XKE5 535 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 ARMCX5Q6P1M9 558 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 ACER1Q8TDN7 264 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 LRRC15Q8TF66 581 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 CHURC1Q8WUH1 139 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 CDK5RAP3Q96JB5 506 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 MBOAT7Q96N66 472 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 TRIM9Q9C026 710 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 A0A1B0GTH6 734 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 ASNSP08243 561 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 GRB10Q13322 594 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 STIM1Q13586 685 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 HSP90AA4PQ58FG1 418 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 SPICE1Q8N0Z3 855 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 VCPKMTQ9H867 229 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 KCND1Q9NSA2 647 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 INTS13Q9NVM9 706 aa23.03■■□□□ 1.28
CCDC78-207ENST00000466708 PPP1R1BQ9UD71 204 aaPredicted RBP23.03■■□□□ 1.28
CCDC78-207ENST00000466708 SLC26A4O43511 780 aa23.02■■□□□ 1.28
CCDC78-207ENST00000466708 MARCH6O60337 910 aa23.02■■□□□ 1.28
CCDC78-207ENST00000466708 KCNJ6P48051 423 aa23.02■■□□□ 1.28
CCDC78-207ENST00000466708 NR1I3Q14994 352 aa23.02■■□□□ 1.28
CCDC78-207ENST00000466708 SV2BQ7L1I2 683 aa23.02■■□□□ 1.28
CCDC78-207ENST00000466708 ADSSL1Q8N142 457 aa23.02■■□□□ 1.28
CCDC78-207ENST00000466708 GIMAP8Q8ND71 665 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-207ENST00000466708 HAS1Q92839 578 aa23.02■■□□□ 1.28
CCDC78-207ENST00000466708 PPP1R2P41236 205 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 PRCPP42785 496 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 SPAG1Q07617 926 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 MIGA2Q7L4E1 593 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 CCDC112Q8NEF3 446 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 NELFBQ8WX92 580 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 CRYGNQ8WXF5 182 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 LRRC27Q9C0I9 530 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 PCDHA12Q9UN75 941 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 SPDYE3A6NKU9 549 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 USH1GQ495M9 461 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 FAM83BQ5T0W9 1011 aa23.01■■□□□ 1.27
CCDC78-207ENST00000466708 SPECC1LQ69YQ0 1117 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms