RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 ARHGAP6O43182 974 aa17.36■□□□□ 0.37
SNED1-208ENST00000466618 N4BP1O75113 896 aaKnown RBP17.36■□□□□ 0.37
SNED1-208ENST00000466618 PSEN1P49768 467 aa17.36■□□□□ 0.37
SNED1-208ENST00000466618 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
SNED1-208ENST00000466618 VSTM4Q8IW00 320 aa17.36■□□□□ 0.37
SNED1-208ENST00000466618 HNRNPLLQ8WVV9 542 aaKnown RBP17.36■□□□□ 0.37
SNED1-208ENST00000466618 DRC1Q96MC2 740 aa17.36■□□□□ 0.37
SNED1-208ENST00000466618 TMEM47Q9BQJ4 181 aa17.36■□□□□ 0.37
SNED1-208ENST00000466618 CSADQ9Y600 493 aa17.36■□□□□ 0.37
SNED1-208ENST00000466618 CORO7P57737 925 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 ZRSR1Q15695 479 aaKnown RBP17.35■□□□□ 0.37
SNED1-208ENST00000466618 IFIT1BQ5T764 474 aaKnown RBP17.35■□□□□ 0.37
SNED1-208ENST00000466618 MSL3Q8N5Y2 521 aaKnown RBP17.35■□□□□ 0.37
SNED1-208ENST00000466618 WDR18Q9BV38 432 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 PICK1Q9NRD5 415 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 SYNPO2Q9UMS6 1093 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 TMEM232C9JQI7 657 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 UBASH3AP57075 661 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 PTPN21Q16825 1174 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 ANKZF1Q9H8Y5 726 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 RTEL1Q9NZ71 1219 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 FAN1Q9Y2M0 1017 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 TMX2Q9Y320 296 aa17.35■□□□□ 0.37
SNED1-208ENST00000466618 TOP1P11387 765 aaKnown RBP17.34■□□□□ 0.37
SNED1-208ENST00000466618 ACER1Q8TDN7 264 aa17.34■□□□□ 0.37
SNED1-208ENST00000466618 SPDYE5A6NIY4 337 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 ECE1P42892 770 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 GUCY1B3Q02153 619 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 MCM6Q14566 821 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 LRRC31Q6UY01 552 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 ELP3Q9H9T3 547 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 AFG3L2Q9Y4W6 797 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 OTOFQ9HC10 1997 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 DOCK1Q14185 1865 aa17.33■□□□□ 0.37
SNED1-208ENST00000466618 MYH8P13535 1937 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 GOLGA6L9A6NEM1 432 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 CPP00450 1065 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 TROAPQ12815 778 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 APOA5Q6Q788 366 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 TOGARAM2Q6ZUX3 1019 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 ERO1BQ86YB8 467 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 LINC00301Q8NCQ3 95 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 PNMA1Q8ND90 353 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 PPM1EQ8WY54 764 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 RAB21Q9UL25 225 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 ZHX2Q9Y6X8 837 aa17.33■□□□□ 0.36
SNED1-208ENST00000466618 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 PPATQ06203 517 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 HDXQ7Z353 690 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 PNKPQ96T60 521 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 KAT14Q9H8E8 782 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 ARHGEF10LQ9HCE6 1279 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 INTS13Q9NVM9 706 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 SUGP1Q8IWZ8 645 aaKnown RBP17.32■□□□□ 0.36
SNED1-208ENST00000466618 ZNF654Q8IZM8 581 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 ZNF280CQ8ND82 737 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 ZNF274Q96GC6 653 aaPredicted RBP17.32■□□□□ 0.36
SNED1-208ENST00000466618 KIAA1683Q9H0B3 1180 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 AS3MTQ9HBK9 375 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 L1RE1Q9UN81 338 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 HPS5Q9UPZ3 1129 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 TLL2Q9Y6L7 1015 aa17.32■□□□□ 0.36
SNED1-208ENST00000466618 KLF18A0A0U1RQI7 1052 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 ANKRD65E5RJM6 399 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 SERPINC1P01008 464 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 PDIA3P30101 505 aaKnown RBP17.31■□□□□ 0.36
SNED1-208ENST00000466618 CHMP4BP1P59074 171 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 SPP2Q13103 211 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 NFXL1Q6ZNB6 911 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 LRRC47Q8N1G4 583 aaKnown RBP17.31■□□□□ 0.36
SNED1-208ENST00000466618 MSANTD4Q8NCY6 345 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 GMCL1P1Q8NEA9 526 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 SUGCTQ9HAC7 445 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 CLIC4Q9Y696 253 aa17.31■□□□□ 0.36
SNED1-208ENST00000466618 TMEM88BA6NKF7 163 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 CUTAO60888 179 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 ZNF202O95125 648 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 SNHG28P0DPA3 235 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 RCAN1P53805 252 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 HUNKP57058 714 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 TBX2Q13207 712 aaPredicted RBP17.3■□□□□ 0.36
SNED1-208ENST00000466618 ISM2Q6H9L7 571 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 SRGAP1Q7Z6B7 1085 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 SLC10A4Q96EP9 437 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 BAG1Q99933 345 aaPredicted RBP17.3■□□□□ 0.36
SNED1-208ENST00000466618 ZSWIM4Q9H7M6 989 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 NID2Q14112 1375 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 TRPM7Q96QT4 1865 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 ATAD5Q96QE3 1844 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 USP17L10C9JJH3 530 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 PPFIA3O75145 1194 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 DDAH1O94760 285 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 GJA5P36382 358 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 BACE1P56817 501 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 KIAA1755Q5JYT7 1200 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 CATIPQ7Z7H3 387 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms