RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 FGFR1P11362 822 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 PABPC1P11940 636 aaKnown RBP6.67□□□□□ -1.34
LINC00879-204ENST00000466560 RAP1GAPP47736 663 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 SEPHS1P49903 392 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 TMEM145Q8NBT3 493 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 TMEM52Q8NDY8 209 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 ZSWIM2Q8NEG5 633 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 COPS5Q92905 334 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 OSBP2Q969R2 916 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 HHIPL1Q96JK4 782 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 EXOC2Q96KP1 924 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 IPO9Q96P70 1041 aaKnown RBP6.67□□□□□ -1.34
LINC00879-204ENST00000466560 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
LINC00879-204ENST00000466560 YBX2Q9Y2T7 364 aaKnown RBP6.67□□□□□ -1.34
LINC00879-204ENST00000466560 NOTOA8MTQ0 251 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 TSPAN15O95858 294 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 CPP00450 1065 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 SCG5P05408 212 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 THBDP07204 575 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 ENDOUP21128 410 aaKnown RBP6.66□□□□□ -1.34
LINC00879-204ENST00000466560 KIR2DL1P43626 348 aaPredicted RBP6.66□□□□□ -1.34
LINC00879-204ENST00000466560 KIR2DL2P43627 348 aaPredicted RBP6.66□□□□□ -1.34
LINC00879-204ENST00000466560 SNX17Q15036 470 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 SLC14A2Q15849 920 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 EEF1DP3Q658K8 133 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 RCSD1Q6JBY9 416 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 CEP128Q6ZU80 1094 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 IRF2BP1Q8IU81 584 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 SCUBE1Q8IWY4 988 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 NLGN1Q8N2Q7 840 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 NAT16Q8N8M0 369 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 KCTD13Q8WZ19 329 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 INTS4Q96HW7 963 aaKnown RBP6.66□□□□□ -1.34
LINC00879-204ENST00000466560 SLC26A8Q96RN1 970 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 DHRS4Q9BTZ2 278 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 ERVK13-1Q9NX77 482 aa6.66□□□□□ -1.34
LINC00879-204ENST00000466560 EFEMP2O95967 443 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 C1QTNF9P0C862 333 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 PDE6BP35913 854 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 MAP4K2Q12851 820 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 ZC3H12BQ5HYM0 836 aaKnown RBP6.65□□□□□ -1.34
LINC00879-204ENST00000466560 DENND5AQ6IQ26 1287 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 SDE2Q6IQ49 451 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 SIRT2Q8IXJ6 389 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 KREMEN2Q8NCW0 462 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 FRS2Q8WU20 508 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 KISS1RQ969F8 398 aaPredicted RBP6.65□□□□□ -1.34
LINC00879-204ENST00000466560 SHISA4Q96DD7 197 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 FCRL2Q96LA5 508 aaPredicted RBP6.65□□□□□ -1.34
LINC00879-204ENST00000466560 PTCHD1Q96NR3 888 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 FANCLQ9NW38 375 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 TMEM260Q9NX78 707 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 CLEC1BQ9P126 229 aa6.65□□□□□ -1.34
LINC00879-204ENST00000466560 BLACEA4D250 179 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 ARNTLO00327 626 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 NFIBO00712 420 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 NRDCO43847 1150 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 KRT1P04264 644 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 TMEM253P0C7T8 217 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 PLS3P13797 630 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 CEBPAP49715 358 aaPredicted RBP6.64□□□□□ -1.35
LINC00879-204ENST00000466560 SLC35F1Q5T1Q4 408 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 ZNF605Q86T29 641 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 NLRX1Q86UT6 975 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 CPNE8Q86YQ8 564 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 NPLOC4Q8TAT6 608 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 C1orf159Q96HA4 380 aa6.64□□□□□ -1.35
LINC00879-204ENST00000466560 TMEFF2Q9UIK5 374 aaPredicted RBP6.64□□□□□ -1.35
LINC00879-204ENST00000466560 MRPS23Q9Y3D9 190 aaKnown RBP6.64□□□□□ -1.35
LINC00879-204ENST00000466560 FADS2P1A8MWK0 482 aa6.63□□□□□ -1.35
LINC00879-204ENST00000466560 TBC1D8O95759 1140 aa6.63□□□□□ -1.35
LINC00879-204ENST00000466560 PAMP19021 973 aa6.63□□□□□ -1.35
LINC00879-204ENST00000466560 RTP1P59025 263 aa6.63□□□□□ -1.35
LINC00879-204ENST00000466560 HLA-DQA1Q5Y7H0 255 aa6.63□□□□□ -1.35
LINC00879-204ENST00000466560 HOMER1Q86YM7 354 aa6.63□□□□□ -1.35
LINC00879-204ENST00000466560 APPBP2Q92624 585 aa6.63□□□□□ -1.35
LINC00879-204ENST00000466560 TNFRSF10DQ9UBN6 386 aa6.63□□□□□ -1.35
LINC00879-204ENST00000466560 CCDC163A0A0D9SF12 145 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 NPHP3-ACAD11A0A0J9YXS1 232 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 MEFVO15553 781 aaPredicted RBP6.62□□□□□ -1.35
LINC00879-204ENST00000466560 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
LINC00879-204ENST00000466560 LAPTM5Q13571 262 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 NTRK3Q16288 839 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 ADGRF1Q5T601 910 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 CYP2R1Q6VVX0 501 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 USP53Q70EK8 1073 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 ANKLE2Q86XL3 938 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 PPIL6Q8IXY8 311 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 KCNN1Q92952 543 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 PLCD4Q9BRC7 762 aa6.62□□□□□ -1.35
LINC00879-204ENST00000466560 CADPSQ9ULU8 1353 aa6.61□□□□□ -1.35
LINC00879-204ENST00000466560 OR14I1A6ND48 311 aa6.61□□□□□ -1.35
LINC00879-204ENST00000466560 ETV2O00321 342 aaPredicted RBP6.61□□□□□ -1.35
LINC00879-204ENST00000466560 PPP1R12AO14974 1030 aaPredicted RBP6.61□□□□□ -1.35
LINC00879-204ENST00000466560 CDC45O75419 566 aa6.61□□□□□ -1.35
LINC00879-204ENST00000466560 ASMTLO95671 621 aa6.61□□□□□ -1.35
LINC00879-204ENST00000466560 INF2Q27J81 1249 aa6.61□□□□□ -1.35
LINC00879-204ENST00000466560 HSF5Q4G112 596 aaPredicted RBP6.61□□□□□ -1.35
LINC00879-204ENST00000466560 ATG14Q6ZNE5 492 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms