RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 PHRF1Q9P1Y6 1649 aaKnown RBP6.33□□□□□ -1.4
UBP1-207ENST00000466441 TTC21BQ7Z4L5 1316 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 MED1Q15648 1581 aaPredicted RBP6.33□□□□□ -1.4
UBP1-207ENST00000466441 FAM221BA6H8Z2 402 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 B2RBV5 119 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 FYB1O15117 783 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 SUSD5O60279 629 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 GSK3AP49840 483 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 SFRP5Q5T4F7 317 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 DUSP27Q5VZP5 1158 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 PRR23CQ6ZRP0 262 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 BRINP3Q76B58 766 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 ZAR1Q86SH2 424 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 RIN3Q8TB24 985 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 VWCEQ96DN2 955 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 C7orf69Q9H7B7 122 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 CWC22Q9HCG8 908 aaKnown RBP6.33□□□□□ -1.4
UBP1-207ENST00000466441 PRDM5Q9NQX1 630 aaPredicted RBP6.33□□□□□ -1.4
UBP1-207ENST00000466441 PRR13Q9NZ81 148 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 PXDNQ92626 1479 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 PHLPP1O60346 1717 aa6.33□□□□□ -1.4
UBP1-207ENST00000466441 IGF2BP3O00425 579 aaKnown RBP eCLIP6.32□□□□□ -1.4
UBP1-207ENST00000466441 EOMESO95936 686 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 TP53P04637 393 aaPredicted RBP6.32□□□□□ -1.4
UBP1-207ENST00000466441 FAM87AP0C7U9 286 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 ATF3P18847 181 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 CPSF6Q16630 551 aaKnown RBP eCLIP6.32□□□□□ -1.4
UBP1-207ENST00000466441 ZC3H12BQ5HYM0 836 aaKnown RBP6.32□□□□□ -1.4
UBP1-207ENST00000466441 RNF43Q68DV7 783 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 SDE2Q6IQ49 451 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 C7orf61Q8IZ16 206 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 LRRC47Q8N1G4 583 aaKnown RBP6.32□□□□□ -1.4
UBP1-207ENST00000466441 TMEM151AQ8N4L1 468 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 NGDNQ8NEJ9 315 aaKnown RBP6.32□□□□□ -1.4
UBP1-207ENST00000466441 SGSM3Q96HU1 749 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 PUS7Q96PZ0 661 aaKnown RBP6.32□□□□□ -1.4
UBP1-207ENST00000466441 DNAJC7Q99615 494 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 HAUS7Q99871 368 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 METTL22Q9BUU2 404 aaPredicted RBP6.32□□□□□ -1.4
UBP1-207ENST00000466441 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 OVOS2A0A0J9YW53 1432 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 DCCP43146 1447 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 OVOS2Q6IE36 1432 aa6.32□□□□□ -1.4
UBP1-207ENST00000466441 EDC4Q6P2E9 1401 aaKnown RBP6.32□□□□□ -1.4
UBP1-207ENST00000466441 A0A087WZG4 1122 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 HMX2A2RU54 273 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 ANP32CO43423 234 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 PPM1BO75688 479 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 GDF11O95390 407 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 H2AFB1P0C5Y9 115 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 H2AFB2P0C5Z0 115 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 PPP2R1AP30153 589 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 AUHQ13825 339 aaKnown RBP6.31□□□□□ -1.4
UBP1-207ENST00000466441 LONRF2Q1L5Z9 754 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 MRM1Q6IN84 353 aaKnown RBP6.31□□□□□ -1.4
UBP1-207ENST00000466441 C22orf34Q6ZV56 151 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 HDGFL2Q7Z4V5 671 aaPredicted RBP6.31□□□□□ -1.4
UBP1-207ENST00000466441 PPFIBP1Q86W92 1011 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 FAM177A1Q8N128 213 aaPredicted RBP6.31□□□□□ -1.4
UBP1-207ENST00000466441 CRACR2BQ8N4Y2 399 aaPredicted RBP6.31□□□□□ -1.4
UBP1-207ENST00000466441 THAP3Q8WTV1 239 aaPredicted RBP6.31□□□□□ -1.4
UBP1-207ENST00000466441 ASCC2Q9H1I8 757 aaPredicted RBP6.31□□□□□ -1.4
UBP1-207ENST00000466441 WHRNQ9P202 907 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 FBXL21Q9UKT6 434 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 PCDHB12Q9Y5F1 795 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 NCOA3Q9Y6Q9 1424 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
UBP1-207ENST00000466441 KDM2BQ8NHM5 1336 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 COL16A1Q07092 1604 aaPredicted RBP6.3□□□□□ -1.4
UBP1-207ENST00000466441 C9IYK1 514 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 ITGA4P13612 1032 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 HSD3B2P26439 372 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 SSRP1Q08945 709 aaKnown RBP6.3□□□□□ -1.4
UBP1-207ENST00000466441 RRS1Q15050 365 aaKnown RBP6.3□□□□□ -1.4
UBP1-207ENST00000466441 NBPF9Q3BBW0 867 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 PLA2G4EQ3MJ16 856 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 SV2CQ496J9 727 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 NOL9Q5SY16 702 aaKnown RBP6.3□□□□□ -1.4
UBP1-207ENST00000466441 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
UBP1-207ENST00000466441 TDRD10Q5VZ19 366 aaKnown RBP6.3□□□□□ -1.4
UBP1-207ENST00000466441 KRT28Q7Z3Y7 464 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 ADAT2Q7Z6V5 191 aaKnown RBP6.3□□□□□ -1.4
UBP1-207ENST00000466441 PIWIL2Q8TC59 973 aaKnown RBP6.3□□□□□ -1.4
UBP1-207ENST00000466441 ZNF512BQ96KM6 892 aaPredicted RBP6.3□□□□□ -1.4
UBP1-207ENST00000466441 MKNK2Q9HBH9 465 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 ATG3Q9NT62 314 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 TERF2IPQ9NYB0 399 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 ZMYM5Q9UJ78 669 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 NFAT5O94916 1531 aa6.3□□□□□ -1.4
UBP1-207ENST00000466441 COL3A1P02461 1466 aaPredicted RBP6.29□□□□□ -1.4
UBP1-207ENST00000466441 COL18A1P39060 1754 aa6.29□□□□□ -1.4
UBP1-207ENST00000466441 CCDC163A0A0D9SF12 145 aa6.29□□□□□ -1.4
UBP1-207ENST00000466441 GNAT3A8MTJ3 354 aa6.29□□□□□ -1.4
UBP1-207ENST00000466441 NOP56O00567 594 aaKnown RBP6.29□□□□□ -1.4
UBP1-207ENST00000466441 LEFTY1O75610 366 aa6.29□□□□□ -1.4
UBP1-207ENST00000466441 EPHX1P07099 455 aa6.29□□□□□ -1.4
UBP1-207ENST00000466441 CD247P20963 164 aa6.29□□□□□ -1.4
UBP1-207ENST00000466441 NFIAQ12857 509 aa6.29□□□□□ -1.4
UBP1-207ENST00000466441 SLC10A6Q3KNW5 377 aa6.29□□□□□ -1.4
UBP1-207ENST00000466441 C2orf27AQ580R0 203 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms