RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 GYS2P54840 703 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 POTEDQ86YR6 584 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 TMEM260Q9NX78 707 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 SEC63Q9UGP8 760 aaKnown RBP21.65■■□□□ 1.06
LIMS2-212ENST00000466410 L1RE1Q9UN81 338 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 NHSQ6T4R5 1651 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 SOGA3Q5TF21 947 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 TRAPPC11Q7Z392 1133 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 CNBD1Q8NA66 436 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 MTIF2P46199 727 aaKnown RBP21.64■■□□□ 1.06
LIMS2-212ENST00000466410 MIIPQ5JXC2 388 aa21.64■■□□□ 1.06
LIMS2-212ENST00000466410 C15orf52Q6ZUT6 534 aaKnown RBP21.64■■□□□ 1.06
LIMS2-212ENST00000466410 KIAA0895Q8NCT3 520 aa21.64■■□□□ 1.06
LIMS2-212ENST00000466410 RCCD1A6NED2 376 aa21.64■■□□□ 1.05
LIMS2-212ENST00000466410 USP17L5A8MUK1 530 aa21.64■■□□□ 1.05
LIMS2-212ENST00000466410 ERLIN1O75477 346 aa21.64■■□□□ 1.05
LIMS2-212ENST00000466410 UFL1O94874 794 aa21.64■■□□□ 1.05
LIMS2-212ENST00000466410 ATP1A1P05023 1023 aaKnown RBP21.64■■□□□ 1.05
LIMS2-212ENST00000466410 TXKP42681 527 aa21.64■■□□□ 1.05
LIMS2-212ENST00000466410 TAF3Q5VWG9 929 aa21.64■■□□□ 1.05
LIMS2-212ENST00000466410 HDXQ7Z353 690 aa21.64■■□□□ 1.05
LIMS2-212ENST00000466410 PDE11AQ9HCR9 933 aa21.64■■□□□ 1.05
LIMS2-212ENST00000466410 RHBDL3P58872 404 aa21.63■■□□□ 1.05
LIMS2-212ENST00000466410 KIAA1328Q86T90 577 aa21.63■■□□□ 1.05
LIMS2-212ENST00000466410 REXO1Q8N1G1 1221 aaKnown RBP21.63■■□□□ 1.05
LIMS2-212ENST00000466410 NEK11Q8NG66 645 aa21.63■■□□□ 1.05
LIMS2-212ENST00000466410 NOC4LQ9BVI4 516 aaKnown RBP21.63■■□□□ 1.05
LIMS2-212ENST00000466410 LACRTQ9GZZ8 138 aa21.63■■□□□ 1.05
LIMS2-212ENST00000466410 KRT83P78385 493 aa21.63■■□□□ 1.05
LIMS2-212ENST00000466410 PCMTD1Q96MG8 357 aaPredicted RBP21.63■■□□□ 1.05
LIMS2-212ENST00000466410 NUP58Q9BVL2 599 aa21.63■■□□□ 1.05
LIMS2-212ENST00000466410 SEMA6BQ9H3T3 888 aa21.63■■□□□ 1.05
LIMS2-212ENST00000466410 NHEJ1Q9H9Q4 299 aaPredicted RBP21.63■■□□□ 1.05
LIMS2-212ENST00000466410 SLC39A2Q9NP94 309 aa21.63■■□□□ 1.05
LIMS2-212ENST00000466410 SRGAP2O75044 1071 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 ZBED6P86452 979 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 AMPD3Q01432 767 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 TRAPPC3LQ5T215 181 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 FAM114A1Q8IWE2 563 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 RETREG2Q8NC44 543 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 JAKMIP2Q96AA8 810 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 GRB10Q13322 594 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 CALML4Q96GE6 196 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 ZNHIT6Q9NWK9 470 aaKnown RBP21.62■■□□□ 1.05
LIMS2-212ENST00000466410 SPATA31A6Q5VVP1 1343 aa21.62■■□□□ 1.05
LIMS2-212ENST00000466410 FRMPD2Q68DX3 1309 aaPredicted RBP21.62■■□□□ 1.05
LIMS2-212ENST00000466410 CYLC1P35663 651 aaPredicted RBP21.61■■□□□ 1.05
LIMS2-212ENST00000466410 ZSCAN29Q8IWY8 852 aaPredicted RBP21.61■■□□□ 1.05
LIMS2-212ENST00000466410 BLOC1S4Q9NUP1 217 aa21.61■■□□□ 1.05
LIMS2-212ENST00000466410 TAF1LQ8IZX4 1826 aa21.61■■□□□ 1.05
LIMS2-212ENST00000466410 SMARCA1P28370 1054 aa21.61■■□□□ 1.05
LIMS2-212ENST00000466410 CNNM4Q6P4Q7 775 aa21.61■■□□□ 1.05
LIMS2-212ENST00000466410 CERS3Q8IU89 383 aa21.61■■□□□ 1.05
LIMS2-212ENST00000466410 RPGRQ92834 1020 aaKnown RBP21.61■■□□□ 1.05
LIMS2-212ENST00000466410 MTMR9Q96QG7 549 aa21.61■■□□□ 1.05
LIMS2-212ENST00000466410 SAR1BQ9Y6B6 198 aa21.61■■□□□ 1.05
LIMS2-212ENST00000466410 DUSP10Q9Y6W6 482 aa21.61■■□□□ 1.05
LIMS2-212ENST00000466410 CYP27A1Q02318 531 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 MFSD14BQ5SR56 506 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 PAPD7Q5XG87 772 aaKnown RBP21.6■■□□□ 1.05
LIMS2-212ENST00000466410 PRR5LQ6MZQ0 368 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 ZNF662Q6ZS27 426 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 COA7Q96BR5 231 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 ERGIC2Q96RQ1 377 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 MMS19Q96T76 1030 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 RIOX1Q9H6W3 641 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 MYMKA6NI61 221 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 EIF3CLB5ME19 914 aaKnown RBP21.6■■□□□ 1.05
LIMS2-212ENST00000466410 KRT86O43790 486 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 EDIL3O43854 480 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 PDHBP11177 359 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 IL1R1P14778 569 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 SV2BQ7L1I2 683 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 EIF3CQ99613 913 aaKnown RBP21.6■■□□□ 1.05
LIMS2-212ENST00000466410 RNF216Q9NWF9 866 aaPredicted RBP21.6■■□□□ 1.05
LIMS2-212ENST00000466410 ADAM21Q9UKJ8 722 aa21.6■■□□□ 1.05
LIMS2-212ENST00000466410 ESYT2A0FGR8 921 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 SLC37A4O43826 429 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 N4BP1O75113 896 aaKnown RBP21.59■■□□□ 1.05
LIMS2-212ENST00000466410 PLCG2P16885 1265 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 PPP1R2P41236 205 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 NOVP48745 357 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 CALCRLQ16602 461 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 CENPPQ6IPU0 288 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 FAM196AQ6ZSG2 479 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 CCDC170Q8IYT3 715 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 GJD4Q96KN9 370 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-212ENST00000466410 PNMA5Q96PV4 448 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 LRWD1Q9UFC0 647 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 TDP2O95551 362 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 HNRNPH2P55795 449 aaKnown RBP21.59■■□□□ 1.05
LIMS2-212ENST00000466410 CASP8Q14790 479 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 GGA1Q9UJY5 639 aa21.59■■□□□ 1.05
LIMS2-212ENST00000466410 COBLL1Q53SF7 1204 aa21.58■■□□□ 1.05
LIMS2-212ENST00000466410 DYMQ7RTS9 669 aa21.58■■□□□ 1.05
LIMS2-212ENST00000466410 CAPZA3Q96KX2 299 aa21.58■■□□□ 1.05
LIMS2-212ENST00000466410 IPO7O95373 1038 aaKnown RBP21.58■■□□□ 1.04
LIMS2-212ENST00000466410 PLEKP08567 350 aaPredicted RBP21.58■■□□□ 1.04
LIMS2-212ENST00000466410 FIGNQ5HY92 759 aa21.58■■□□□ 1.04
LIMS2-212ENST00000466410 FKBP15Q5T1M5 1219 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms