RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ZNF536O15090 1300 aa6.85□□□□□ -1.31
LRCH3-211ENST00000466054 CRKP46108 304 aa6.85□□□□□ -1.31
LRCH3-211ENST00000466054 NAALADL2Q58DX5 795 aa6.85□□□□□ -1.31
LRCH3-211ENST00000466054 CRTC3Q6UUV7 619 aa6.85□□□□□ -1.31
LRCH3-211ENST00000466054 TTLL7Q6ZT98 887 aa6.85□□□□□ -1.31
LRCH3-211ENST00000466054 REXO1Q8N1G1 1221 aaKnown RBP6.85□□□□□ -1.31
LRCH3-211ENST00000466054 FBXO27Q8NI29 283 aa6.85□□□□□ -1.31
LRCH3-211ENST00000466054 SH3RF3Q8TEJ3 882 aaPredicted RBP6.85□□□□□ -1.31
LRCH3-211ENST00000466054 SEC16BQ96JE7 1060 aa6.85□□□□□ -1.31
LRCH3-211ENST00000466054 RBM15Q96T37 977 aaKnown RBP eCLIP6.85□□□□□ -1.31
LRCH3-211ENST00000466054 DSCC1Q9BVC3 393 aa6.85□□□□□ -1.31
LRCH3-211ENST00000466054 GMIPQ9P107 970 aa6.85□□□□□ -1.31
LRCH3-211ENST00000466054 TLR3O15455 904 aaKnown RBP6.84□□□□□ -1.31
LRCH3-211ENST00000466054 PLATP00750 562 aa6.84□□□□□ -1.31
LRCH3-211ENST00000466054 GSTM1P09488 218 aa6.84□□□□□ -1.31
LRCH3-211ENST00000466054 FBLN1P23142 703 aa6.84□□□□□ -1.31
LRCH3-211ENST00000466054 POLR2BP30876 1174 aaKnown RBP6.84□□□□□ -1.31
LRCH3-211ENST00000466054 MC3RP41968 323 aa6.84□□□□□ -1.31
LRCH3-211ENST00000466054 ZNF165P49910 485 aa6.84□□□□□ -1.31
LRCH3-211ENST00000466054 SEZ6Q53EL9 994 aa6.84□□□□□ -1.31
LRCH3-211ENST00000466054 CWF19L1Q69YN2 538 aaKnown RBP6.84□□□□□ -1.31
LRCH3-211ENST00000466054 PDLIM7Q9NR12 457 aa6.84□□□□□ -1.31
LRCH3-211ENST00000466054 SOX9P48436 509 aa6.83□□□□□ -1.32
LRCH3-211ENST00000466054 B3GNT8Q7Z7M8 397 aa6.83□□□□□ -1.32
LRCH3-211ENST00000466054 GMLQ99445 158 aa6.83□□□□□ -1.32
LRCH3-211ENST00000466054 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
LRCH3-211ENST00000466054 BRMS1Q9HCU9 246 aa6.83□□□□□ -1.32
LRCH3-211ENST00000466054 FZD7O75084 574 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 ATE1O95260 518 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 SLPIP03973 132 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 GSNP06396 782 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 ASGR2P07307 311 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 ATF4P18848 351 aaPredicted RBP6.82□□□□□ -1.32
LRCH3-211ENST00000466054 TACR1P25103 407 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 CTSKP43235 329 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 CRB2Q5IJ48 1285 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 GLB1LQ6UWU2 654 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 FAM124AQ86V42 546 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 ZNF761Q86XN6 746 aaPredicted RBP6.82□□□□□ -1.32
LRCH3-211ENST00000466054 EHMT1Q9H9B1 1298 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 STRIP2Q9ULQ0 834 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 PLA2G2DQ9UNK4 145 aa6.82□□□□□ -1.32
LRCH3-211ENST00000466054 SMARCA5O60264 1052 aaPredicted RBP6.81□□□□□ -1.32
LRCH3-211ENST00000466054 IMPDH2P12268 514 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 MCM4P33991 863 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 ARID5AQ03989 594 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 DLX2Q07687 328 aaPredicted RBP6.81□□□□□ -1.32
LRCH3-211ENST00000466054 TBC1D10BQ4KMP7 808 aaPredicted RBP6.81□□□□□ -1.32
LRCH3-211ENST00000466054 CYP2R1Q6VVX0 501 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 SPRED1Q7Z699 444 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 CABP7Q86V35 215 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 TMEM52Q8NDY8 209 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 GINM1Q9NU53 330 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 EFR3BQ9Y2G0 817 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 PCDHB14Q9Y5E9 798 aa6.81□□□□□ -1.32
LRCH3-211ENST00000466054 KIAA2012Q0VF49 1180 aa6.8□□□□□ -1.32
LRCH3-211ENST00000466054 OVOS1Q6IE37 1185 aa6.8□□□□□ -1.32
LRCH3-211ENST00000466054 BORAQ6PGQ7 559 aa6.8□□□□□ -1.32
LRCH3-211ENST00000466054 ST6GALNAC2Q9UJ37 374 aa6.8□□□□□ -1.32
LRCH3-211ENST00000466054 CCNFP41002 786 aa6.79□□□□□ -1.32
LRCH3-211ENST00000466054 NASPP49321 788 aaPredicted RBP6.79□□□□□ -1.32
LRCH3-211ENST00000466054 CLCQ05315 142 aa6.79□□□□□ -1.32
LRCH3-211ENST00000466054 SF3A1Q15459 793 aaKnown RBP6.79□□□□□ -1.32
LRCH3-211ENST00000466054 LRRFIP1Q32MZ4 808 aaKnown RBP6.79□□□□□ -1.32
LRCH3-211ENST00000466054 GK5Q6ZS86 529 aa6.79□□□□□ -1.32
LRCH3-211ENST00000466054 LGI4Q8N135 537 aa6.79□□□□□ -1.32
LRCH3-211ENST00000466054 SMARCC2Q8TAQ2 1214 aa6.79□□□□□ -1.32
LRCH3-211ENST00000466054 ADAMTS17Q8TE56 1095 aa6.79□□□□□ -1.32
LRCH3-211ENST00000466054 ZBTB8AQ96BR9 441 aa6.79□□□□□ -1.32
LRCH3-211ENST00000466054 ZNRF3Q9ULT6 936 aa6.79□□□□□ -1.32
LRCH3-211ENST00000466054 PMLP29590 882 aa6.78□□□□□ -1.32
LRCH3-211ENST00000466054 CEBPAP49715 358 aaPredicted RBP6.78□□□□□ -1.32
LRCH3-211ENST00000466054 RTP2Q5QGT7 225 aa6.78□□□□□ -1.32
LRCH3-211ENST00000466054 FERD3LQ96RJ6 166 aa6.78□□□□□ -1.32
LRCH3-211ENST00000466054 VPS11Q9H270 941 aa6.78□□□□□ -1.32
LRCH3-211ENST00000466054 FGRP09769 529 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 DNAJA1P31689 397 aaKnown RBP6.77□□□□□ -1.33
LRCH3-211ENST00000466054 ACVRL1P37023 503 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 AUHQ13825 339 aaKnown RBP6.77□□□□□ -1.33
LRCH3-211ENST00000466054 RGL3Q3MIN7 710 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 CDCP2Q5VXM1 449 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 CRIP3Q6Q6R5 217 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 NLRC3Q7RTR2 1065 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 RBBP8NLQ8NC74 664 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-211ENST00000466054 OR6P1Q8NGX9 317 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 SLC6A18Q96N87 628 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 CDK5RAP1Q96SZ6 601 aaKnown RBP6.77□□□□□ -1.33
LRCH3-211ENST00000466054 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.77□□□□□ -1.33
LRCH3-211ENST00000466054 SRRTQ9BXP5 876 aaKnown RBP6.77□□□□□ -1.33
LRCH3-211ENST00000466054 BCAS3Q9H6U6 928 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 PRR13Q9NZ81 148 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 NUDT5Q9UKK9 219 aa6.77□□□□□ -1.33
LRCH3-211ENST00000466054 MEIS3P2A8K0S8 358 aa6.76□□□□□ -1.33
LRCH3-211ENST00000466054 TBC1D8O95759 1140 aa6.76□□□□□ -1.33
LRCH3-211ENST00000466054 CORO7P57737 925 aa6.76□□□□□ -1.33
LRCH3-211ENST00000466054 SMAD4Q13485 552 aaKnown RBP6.76□□□□□ -1.33
LRCH3-211ENST00000466054 SREK1Q8WXA9 508 aaKnown RBP6.76□□□□□ -1.33
LRCH3-211ENST00000466054 NOX5Q96PH1 765 aa6.76□□□□□ -1.33
LRCH3-211ENST00000466054 SLC12A9Q9BXP2 914 aa6.76□□□□□ -1.33
LRCH3-211ENST00000466054 CNNM2Q9H8M5 875 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms