RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 ASB14A6NK59 587 aa30.05■■■□□ 2.4
SMC4-206ENST00000465903 ACVR2BQ13705 512 aa30.05■■■□□ 2.4
SMC4-206ENST00000465903 MORC4Q8TE76 937 aa30.05■■■□□ 2.4
SMC4-206ENST00000465903 PIBF1Q8WXW3 757 aa30.05■■■□□ 2.4
SMC4-206ENST00000465903 PAWRQ96IZ0 340 aaKnown RBP30.05■■■□□ 2.4
SMC4-206ENST00000465903 PCDHA1Q9Y5I3 950 aa30.05■■■□□ 2.4
SMC4-206ENST00000465903 ZBTB43O43298 467 aa30.04■■■□□ 2.4
SMC4-206ENST00000465903 ALDH5A1P51649 535 aaPredicted RBP30.04■■■□□ 2.4
SMC4-206ENST00000465903 APOBRQ0VD83 1088 aa30.04■■■□□ 2.4
SMC4-206ENST00000465903 TMTC3Q6ZXV5 915 aa30.04■■■□□ 2.4
SMC4-206ENST00000465903 RUFY3Q7L099 469 aa30.04■■■□□ 2.4
SMC4-206ENST00000465903 BRF1Q92994 677 aa30.04■■■□□ 2.4
SMC4-206ENST00000465903 TM6SF1Q9BZW5 370 aa30.04■■■□□ 2.4
SMC4-206ENST00000465903 ALPK3Q96L96 1907 aa30.04■■■□□ 2.4
SMC4-206ENST00000465903 MCF2L2Q86YR7 1114 aa30.03■■■□□ 2.4
SMC4-206ENST00000465903 SYTL5Q8TDW5 730 aaPredicted RBP30.03■■■□□ 2.4
SMC4-206ENST00000465903 FAM217BQ9NTX9 383 aaPredicted RBP30.03■■■□□ 2.4
SMC4-206ENST00000465903 COL20A1Q9P218 1284 aa30.03■■■□□ 2.4
SMC4-206ENST00000465903 ADD3Q9UEY8 706 aaKnown RBP30.03■■■□□ 2.4
SMC4-206ENST00000465903 ZHX1Q9UKY1 873 aaPredicted RBP30.03■■■□□ 2.4
SMC4-206ENST00000465903 AKR1A1P14550 325 aa30.02■■■□□ 2.4
SMC4-206ENST00000465903 FGD1P98174 961 aa30.02■■■□□ 2.4
SMC4-206ENST00000465903 GHRHRQ02643 423 aa30.02■■■□□ 2.4
SMC4-206ENST00000465903 RCAN1P53805 252 aa30.01■■■□□ 2.39
SMC4-206ENST00000465903 RTN1Q16799 776 aa30.01■■■□□ 2.39
SMC4-206ENST00000465903 CCDC82Q8N4S0 544 aa30.01■■■□□ 2.39
SMC4-206ENST00000465903 RRP36Q96EU6 259 aaKnown RBP30.01■■■□□ 2.39
SMC4-206ENST00000465903 TAAR1Q96RJ0 339 aa30.01■■■□□ 2.39
SMC4-206ENST00000465903 RBM28Q9NW13 759 aaKnown RBP30.01■■■□□ 2.39
SMC4-206ENST00000465903 FAM184BQ9ULE4 1060 aa30.01■■■□□ 2.39
SMC4-206ENST00000465903 LOC102724159A0A0B4J2E5 919 aa30■■■□□ 2.39
SMC4-206ENST00000465903 ADCY6O43306 1168 aa30■■■□□ 2.39
SMC4-206ENST00000465903 CDC27P30260 824 aa30■■■□□ 2.39
SMC4-206ENST00000465903 HSD17B4P51659 736 aa30■■■□□ 2.39
SMC4-206ENST00000465903 PWP2Q15269 919 aaKnown RBP30■■■□□ 2.39
SMC4-206ENST00000465903 CCDC144BQ3MJ40 725 aa30■■■□□ 2.39
SMC4-206ENST00000465903 C8orf34Q49A92 452 aa30■■■□□ 2.39
SMC4-206ENST00000465903 NECAB2Q7Z6G3 386 aa30■■■□□ 2.39
SMC4-206ENST00000465903 DNERQ8NFT8 737 aa30■■■□□ 2.39
SMC4-206ENST00000465903 LENG1Q96BZ8 264 aaPredicted RBP30■■■□□ 2.39
SMC4-206ENST00000465903 CYP46A1Q9Y6A2 500 aa30■■■□□ 2.39
SMC4-206ENST00000465903 GOLGA8AA7E2F4 631 aa29.99■■■□□ 2.39
SMC4-206ENST00000465903 GOLGA8BA8MQT2 603 aa29.99■■■□□ 2.39
SMC4-206ENST00000465903 CFBP00751 764 aa29.99■■■□□ 2.39
SMC4-206ENST00000465903 FUT2Q10981 343 aa29.99■■■□□ 2.39
SMC4-206ENST00000465903 TRAF1Q13077 416 aa29.99■■■□□ 2.39
SMC4-206ENST00000465903 UPF3BQ9BZI7 483 aaKnown RBP29.99■■■□□ 2.39
SMC4-206ENST00000465903 hCG_1642624A0A1W2PR95 340 aa29.98■■■□□ 2.39
SMC4-206ENST00000465903 COL6A1P12109 1028 aa29.98■■■□□ 2.39
SMC4-206ENST00000465903 EDNRBP24530 442 aa29.98■■■□□ 2.39
SMC4-206ENST00000465903 EVCP57679 992 aa29.98■■■□□ 2.39
SMC4-206ENST00000465903 TOB2Q14106 344 aaPredicted RBP29.98■■■□□ 2.39
SMC4-206ENST00000465903 TAPT1Q6NXT6 567 aa29.98■■■□□ 2.39
SMC4-206ENST00000465903 EEPD1Q7L9B9 569 aa29.98■■■□□ 2.39
SMC4-206ENST00000465903 PDGFCQ9NRA1 345 aa29.98■■■□□ 2.39
SMC4-206ENST00000465903 CNTNAP5Q8WYK1 1306 aa29.97■■■□□ 2.39
SMC4-206ENST00000465903 RARBP10826 455 aa29.97■■■□□ 2.39
SMC4-206ENST00000465903 ANAPC15P60006 121 aa29.97■■■□□ 2.39
SMC4-206ENST00000465903 GJC2Q5T442 439 aaPredicted RBP29.97■■■□□ 2.39
SMC4-206ENST00000465903 C11orf49Q9H6J7 331 aa29.97■■■□□ 2.39
SMC4-206ENST00000465903 MAP3K20Q9NYL2 800 aaKnown RBP29.97■■■□□ 2.39
SMC4-206ENST00000465903 NAP1L2Q9ULW6 460 aaPredicted RBP29.97■■■□□ 2.39
SMC4-206ENST00000465903 KIAA1217Q5T5P2 1943 aa29.96■■■□□ 2.39
SMC4-206ENST00000465903 EIF5BO60841 1220 aaKnown RBP29.96■■■□□ 2.39
SMC4-206ENST00000465903 ADD1P35611 737 aaKnown RBP29.96■■■□□ 2.39
SMC4-206ENST00000465903 FBXO16Q8IX29 292 aaPredicted RBP29.96■■■□□ 2.39
SMC4-206ENST00000465903 SAMD3Q8N6K7 520 aa29.96■■■□□ 2.39
SMC4-206ENST00000465903 ARRDC4Q8NCT1 418 aa29.96■■■□□ 2.39
SMC4-206ENST00000465903 IL17RAQ96F46 866 aa29.96■■■□□ 2.39
SMC4-206ENST00000465903 SEC63Q9UGP8 760 aaKnown RBP29.96■■■□□ 2.39
SMC4-206ENST00000465903 NID2Q14112 1375 aa29.95■■■□□ 2.39
SMC4-206ENST00000465903 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.95■■■□□ 2.39
SMC4-206ENST00000465903 DNM1LO00429 736 aa29.95■■■□□ 2.39
SMC4-206ENST00000465903 ADCYAP1R1P41586 468 aa29.95■■■□□ 2.39
SMC4-206ENST00000465903 PPP2R5BQ15173 497 aa29.95■■■□□ 2.39
SMC4-206ENST00000465903 LRRC41Q15345 812 aa29.95■■■□□ 2.39
SMC4-206ENST00000465903 VTA1Q9NP79 307 aa29.95■■■□□ 2.39
SMC4-206ENST00000465903 XPNPEP3Q9NQH7 507 aa29.95■■■□□ 2.39
SMC4-206ENST00000465903 ADAMTS4O75173 837 aa29.94■■■□□ 2.38
SMC4-206ENST00000465903 DUSP11O75319 330 aaKnown RBP29.94■■■□□ 2.38
SMC4-206ENST00000465903 PGK1P00558 417 aa29.94■■■□□ 2.38
SMC4-206ENST00000465903 HOXA13P31271 388 aaPredicted RBP29.94■■■□□ 2.38
SMC4-206ENST00000465903 METAP2P50579 478 aaKnown RBP eCLIP29.94■■■□□ 2.38
SMC4-206ENST00000465903 RMDN3Q96TC7 470 aa29.94■■■□□ 2.38
SMC4-206ENST00000465903 PDIA3P30101 505 aaKnown RBP29.93■■■□□ 2.38
SMC4-206ENST00000465903 TMEM63BQ5T3F8 832 aa29.93■■■□□ 2.38
SMC4-206ENST00000465903 NSUN6Q8TEA1 469 aaKnown RBP29.93■■■□□ 2.38
SMC4-206ENST00000465903 HTATIP2Q9BUP3 242 aa29.93■■■□□ 2.38
SMC4-206ENST00000465903 PDRG1Q9NUG6 133 aa29.93■■■□□ 2.38
SMC4-206ENST00000465903 RBM47A0AV96 593 aaKnown RBP29.92■■■□□ 2.38
SMC4-206ENST00000465903 GCOM1H8Y6P7 765 aaPredicted RBP29.92■■■□□ 2.38
SMC4-206ENST00000465903 POLR2MP0CAP2 368 aa29.92■■■□□ 2.38
SMC4-206ENST00000465903 TNFAIP2Q03169 654 aa29.92■■■□□ 2.38
SMC4-206ENST00000465903 PDE4DQ08499 809 aa29.92■■■□□ 2.38
SMC4-206ENST00000465903 IQSEC1Q6DN90 963 aa29.92■■■□□ 2.38
SMC4-206ENST00000465903 LARP6Q9BRS8 491 aaKnown RBP29.92■■■□□ 2.38
SMC4-206ENST00000465903 PXMP2Q9NR77 195 aa29.92■■■□□ 2.38
SMC4-206ENST00000465903 GNEQ9Y223 722 aaKnown RBP29.92■■■□□ 2.38
SMC4-206ENST00000465903 V9GY48 417 aaPredicted RBP29.92■■■□□ 2.38
SMC4-206ENST00000465903 SYNRGQ9UMZ2 1314 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms