RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 PIWIL2Q8TC59 973 aaKnown RBP7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 MKL1Q969V6 931 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 LRRC59Q96AG4 307 aaKnown RBP7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 MRFAP1L1Q96HT8 127 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 SYT17Q9BSW7 474 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 MKNK2Q9HBH9 465 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 APEX2Q9UBZ4 518 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 NCOA3Q9Y6Q9 1424 aa7.33□□□□□ -1.24
CACNA1C-223ENST00000465278 TMEM265A0A087WTH1 108 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 PPM1BO75688 479 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 PRAMEF1O95521 474 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 TPP2P29144 1249 aaPredicted RBP7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 CD96P40200 585 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 NFE2L2Q16236 605 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 CPSF6Q16630 551 aaKnown RBP eCLIP7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 IFI16Q16666 785 aaKnown RBP7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 AOC3Q16853 763 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 DSCC1Q9BVC3 393 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 GPR62Q9BZJ7 368 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 NOL6Q9H6R4 1146 aaKnown RBP7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 CHST7Q9NS84 486 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 SEMA3GQ9NS98 782 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 LRP2BPQ9P2M1 347 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 RGPD3A6NKT7 1758 aaPredicted RBP7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 RGPD4Q7Z3J3 1758 aa7.32□□□□□ -1.24
CACNA1C-223ENST00000465278 COBLO75128 1261 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 VAMP4O75379 141 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 SRFP11831 508 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 ITGA4P13612 1032 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 RASA3Q14644 834 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 MTERF2Q49AM1 385 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 KRT27Q7Z3Y8 459 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 ARHGEF28Q8N1W1 1705 aaKnown RBP7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 CAMKK2Q96RR4 588 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 GBP3Q9H0R5 595 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 ATP13A1Q9HD20 1204 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 GPATCH2Q9NW75 528 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 WHRNQ9P202 907 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 NWD2Q9ULI1 1742 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 RNF112Q9ULX5 631 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 AKT3Q9Y243 479 aa7.31□□□□□ -1.24
CACNA1C-223ENST00000465278 LOC105371045A0A1W2PR82 267 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 SIGLEC6O43699 453 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 HSPA1AP0DMV8 641 aaKnown RBP7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 HSPA1BP0DMV9 641 aaKnown RBP7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 GRIK1P39086 918 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 IFRD2Q12894 506 aaPredicted RBP7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 RASGRF1Q13972 1273 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 LILRB2Q8N423 598 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 FIBCD1Q8N539 461 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 ZNF513Q8N8E2 541 aaPredicted RBP7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 ZDHHC15Q96MV8 337 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 SNX11Q9Y5W9 270 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 PLCH1Q4KWH8 1693 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 CFAP65Q6ZU64 1925 aaKnown RBP7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 ADCY9O60503 1353 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 MAP3K5Q99683 1374 aa7.3□□□□□ -1.24
CACNA1C-223ENST00000465278 DIAPH1O60610 1272 aaKnown RBP7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 ADAM23O75077 832 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 ITGAVP06756 1048 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 LTKP29376 864 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 SLC10A6Q3KNW5 377 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 INTS5Q6P9B9 1019 aaKnown RBP7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 GIMAP6Q6P9H5 292 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 LRP10Q7Z4F1 713 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 TSPYL5Q86VY4 417 aaPredicted RBP7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 CREG2Q8IUH2 290 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 USHBP1Q8N6Y0 703 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 TCTN2Q96GX1 697 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 HRASLS5Q96KN8 279 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 CWC22Q9HCG8 908 aaKnown RBP7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 ZMYM5Q9UJ78 669 aa7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 DIS3Q9Y2L1 958 aaKnown RBP7.29□□□□□ -1.24
CACNA1C-223ENST00000465278 KDM2BQ8NHM5 1336 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 NALCNQ8IZF0 1738 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 H0Y8X5 98 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 NOP56O00567 594 aaKnown RBP7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 CTSKP43235 329 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 CLCN7P51798 805 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 ZNF143P52747 638 aaPredicted RBP7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 SSRP1Q08945 709 aaKnown RBP7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 MSMPQ1L6U9 139 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 DPY19L1Q2PZI1 675 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 GGT6Q6P531 493 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 SPRED2Q7Z698 418 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 FAM9AQ8IZU1 332 aaPredicted RBP7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 ARHGEF39Q8N4T4 335 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 DAGLBQ8NCG7 672 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 BVESQ8NE79 360 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 ST13P5Q8NFI4 369 aaPredicted RBP7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 ENOX1Q8TC92 643 aaKnown RBP7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 SYTL5Q8TDW5 730 aaPredicted RBP7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 HDAC8Q9BY41 377 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 BSDC1Q9NW68 430 aaPredicted RBP7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 VAV3Q9UKW4 847 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 FHOD1Q9Y613 1164 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 MYOM2P54296 1465 aa7.28□□□□□ -1.24
CACNA1C-223ENST00000465278 SLIT2O94813 1529 aa7.27□□□□□ -1.25
CACNA1C-223ENST00000465278 NEXMIFQ5QGS0 1516 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms