RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 IQSEC1Q6DN90 963 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 RETREG2Q8NC44 543 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 PRSS33Q8NF86 280 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 SEZ6LQ9BYH1 1024 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 LMCD1Q9NZU5 365 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 NYAP2Q9P242 653 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 SLC4A4Q9Y6R1 1079 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 LCTP09848 1927 aa17.93■□□□□ 0.46
HDAC6-214ENST00000465269 TECTAO75443 2155 aa17.92■□□□□ 0.46
HDAC6-214ENST00000465269 ALAS1P13196 640 aa17.92■□□□□ 0.46
HDAC6-214ENST00000465269 ADD2P35612 726 aa17.92■□□□□ 0.46
HDAC6-214ENST00000465269 IER5LQ5T953 404 aa17.92■□□□□ 0.46
HDAC6-214ENST00000465269 EP400NLQ6ZTU2 488 aa17.92■□□□□ 0.46
HDAC6-214ENST00000465269 AMOTL1Q8IY63 956 aa17.92■□□□□ 0.46
HDAC6-214ENST00000465269 C17orf80Q9BSJ5 609 aa17.92■□□□□ 0.46
HDAC6-214ENST00000465269 FEM1BQ9UK73 627 aa17.92■□□□□ 0.46
HDAC6-214ENST00000465269 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
HDAC6-214ENST00000465269 ERVK-21P61565 698 aa17.91■□□□□ 0.46
HDAC6-214ENST00000465269 ZP2Q05996 745 aa17.91■□□□□ 0.46
HDAC6-214ENST00000465269 TRERF1Q96PN7 1200 aa17.91■□□□□ 0.46
HDAC6-214ENST00000465269 TGS1Q96RS0 853 aaKnown RBP17.91■□□□□ 0.46
HDAC6-214ENST00000465269 CACNA1HO95180 2353 aa17.91■□□□□ 0.46
HDAC6-214ENST00000465269 SCN10AQ9Y5Y9 1956 aa17.91■□□□□ 0.46
HDAC6-214ENST00000465269 ZBED9Q6R2W3 1325 aa17.91■□□□□ 0.46
HDAC6-214ENST00000465269 TMEM232C9JQI7 657 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 PITPNM1O00562 1244 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 IPO8O15397 1037 aaKnown RBP17.9■□□□□ 0.46
HDAC6-214ENST00000465269 PRDM1O75626 825 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 BAIAP3O94812 1187 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 OAZ1P54368 228 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 DUSP28Q4G0W2 176 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 RASGRP2Q7LDG7 609 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 NEK9Q8TD19 979 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 COPS5Q92905 334 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 MTG1Q9BT17 334 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-214ENST00000465269 WDR11Q9BZH6 1224 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 POLR3EQ9NVU0 708 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 Q9Y3F1 56 aa17.9■□□□□ 0.46
HDAC6-214ENST00000465269 SIP14410 1827 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 IGKV6D-41A0A0C4DH26 115 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 NSMFQ6X4W1 530 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 OR6J1Q8NGC5 347 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 CEP95Q96GE4 821 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 CTAGE1Q96RT6 745 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 PUS7LQ9H0K6 701 aaKnown RBP17.89■□□□□ 0.45
HDAC6-214ENST00000465269 KCNH6Q9H252 994 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 MKNK2Q9HBH9 465 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 CYP39A1Q9NYL5 469 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 MUTYHQ9UIF7 546 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 DMDP11532 3685 aa17.89■□□□□ 0.45
HDAC6-214ENST00000465269 PTPRZ1P23471 2315 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-214ENST00000465269 GJB5O95377 273 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 BMP3P12645 472 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 IRS1P35568 1242 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 SLFN13Q68D06 897 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 RAD9AQ99638 391 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 BOLA2Q9H3K6 86 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 VTA1Q9NP79 307 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 GPHNQ9NQX3 736 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-214ENST00000465269 FAM86C1Q9NVL1 165 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 PAG1Q9NWQ8 432 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 NOD1Q9Y239 953 aa17.88■□□□□ 0.45
HDAC6-214ENST00000465269 MINDY4BA8MYZ0 360 aa17.87■□□□□ 0.45
HDAC6-214ENST00000465269 IKQ13123 557 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-214ENST00000465269 BFSP2Q13515 415 aa17.87■□□□□ 0.45
HDAC6-214ENST00000465269 CLUL1Q15846 466 aa17.87■□□□□ 0.45
HDAC6-214ENST00000465269 CEP85Q6P2H3 762 aa17.87■□□□□ 0.45
HDAC6-214ENST00000465269 FBXO22Q8NEZ5 403 aa17.87■□□□□ 0.45
HDAC6-214ENST00000465269 DHX38Q92620 1227 aaKnown RBP17.87■□□□□ 0.45
HDAC6-214ENST00000465269 DDRGK1Q96HY6 314 aa17.87■□□□□ 0.45
HDAC6-214ENST00000465269 CRBNQ96SW2 442 aa17.87■□□□□ 0.45
HDAC6-214ENST00000465269 VPS13AQ96RL7 3174 aa17.86■□□□□ 0.45
HDAC6-214ENST00000465269 C19orf67A6NJJ6 358 aa17.86■□□□□ 0.45
HDAC6-214ENST00000465269 NBNO60934 754 aa17.86■□□□□ 0.45
HDAC6-214ENST00000465269 CPT1AP50416 773 aa17.86■□□□□ 0.45
HDAC6-214ENST00000465269 TCEAL5Q5H9L2 206 aa17.86■□□□□ 0.45
HDAC6-214ENST00000465269 RHPN1Q8TCX5 695 aa17.86■□□□□ 0.45
HDAC6-214ENST00000465269 MFSD14AQ96MC6 490 aa17.86■□□□□ 0.45
HDAC6-214ENST00000465269 MTMR4Q9NYA4 1195 aa17.86■□□□□ 0.45
HDAC6-214ENST00000465269 ST18O60284 1047 aa17.85■□□□□ 0.45
HDAC6-214ENST00000465269 RLBP1P12271 317 aa17.85■□□□□ 0.45
HDAC6-214ENST00000465269 PTGISQ16647 500 aa17.85■□□□□ 0.45
HDAC6-214ENST00000465269 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
HDAC6-214ENST00000465269 GDF6Q6KF10 455 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-214ENST00000465269 NFRKBQ6P4R8 1299 aa17.85■□□□□ 0.45
HDAC6-214ENST00000465269 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.85■□□□□ 0.45
HDAC6-214ENST00000465269 KCTD1Q719H9 257 aa17.85■□□□□ 0.45
HDAC6-214ENST00000465269 MORC4Q8TE76 937 aa17.85■□□□□ 0.45
HDAC6-214ENST00000465269 ARPP21Q9UBL0 812 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-214ENST00000465269 DCHS1Q96JQ0 3298 aa17.85■□□□□ 0.45
HDAC6-214ENST00000465269 RIF1Q5UIP0 2472 aaKnown RBP17.84■□□□□ 0.45
HDAC6-214ENST00000465269 ALDH5A1P51649 535 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-214ENST00000465269 STAT2P52630 851 aa17.84■□□□□ 0.45
HDAC6-214ENST00000465269 BAATQ14032 418 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-214ENST00000465269 CNKSR3Q6P9H4 555 aa17.84■□□□□ 0.45
HDAC6-214ENST00000465269 LRRC8DQ7L1W4 858 aa17.84■□□□□ 0.45
HDAC6-214ENST00000465269 ITPRIPQ8IWB1 547 aa17.84■□□□□ 0.45
HDAC6-214ENST00000465269 ADHFE1Q8IWW8 467 aa17.84■□□□□ 0.45
HDAC6-214ENST00000465269 GMCL1P1Q8NEA9 526 aa17.84■□□□□ 0.45
HDAC6-214ENST00000465269 MKL1Q969V6 931 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms