RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ANKRD33Q7Z3H0 272 aa20.26■□□□□ 0.83
CPSF4-209ENST00000465132 ANKRD35Q8N283 1001 aa20.26■□□□□ 0.83
CPSF4-209ENST00000465132 CHST13Q8NET6 341 aa20.26■□□□□ 0.83
CPSF4-209ENST00000465132 CTCFLQ8NI51 663 aaPredicted RBP20.26■□□□□ 0.83
CPSF4-209ENST00000465132 NUP133Q8WUM0 1156 aa20.26■□□□□ 0.83
CPSF4-209ENST00000465132 FGD4Q96M96 766 aa20.26■□□□□ 0.83
CPSF4-209ENST00000465132 TOX2Q96NM4 488 aa20.26■□□□□ 0.83
CPSF4-209ENST00000465132 SEMA6BQ9H3T3 888 aa20.26■□□□□ 0.83
CPSF4-209ENST00000465132 STARD7Q9NQZ5 370 aa20.26■□□□□ 0.83
CPSF4-209ENST00000465132 MOXD2PA6NHM9 499 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 BMP3P12645 472 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 RAG1P15918 1043 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 GNAQP50148 359 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 EPHB4P54760 987 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 FAAP100Q0VG06 881 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 ACVR2BQ13705 512 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 KCNA10Q16322 511 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 ASPRV1Q53RT3 343 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 CHURC1Q8WUH1 139 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 BRF1Q92994 677 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 CDX2Q99626 313 aaPredicted RBP20.25■□□□□ 0.83
CPSF4-209ENST00000465132 AGXT2Q9BYV1 514 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 TMEM39AQ9NV64 488 aa20.25■□□□□ 0.83
CPSF4-209ENST00000465132 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.25■□□□□ 0.83
CPSF4-209ENST00000465132 ISY1Q9ULR0 285 aaKnown RBP20.25■□□□□ 0.83
CPSF4-209ENST00000465132 MYADML2A6NDP7 307 aa20.24■□□□□ 0.83
CPSF4-209ENST00000465132 DCDC2CA8MYV0 355 aa20.24■□□□□ 0.83
CPSF4-209ENST00000465132 ZBTB43O43298 467 aa20.24■□□□□ 0.83
CPSF4-209ENST00000465132 PARP1P09874 1014 aaKnown RBP20.24■□□□□ 0.83
CPSF4-209ENST00000465132 FDX1P10109 184 aa20.24■□□□□ 0.83
CPSF4-209ENST00000465132 CST5P28325 142 aaPredicted RBP20.24■□□□□ 0.83
CPSF4-209ENST00000465132 FAM160B2Q86V87 743 aa20.24■□□□□ 0.83
CPSF4-209ENST00000465132 ZNF654Q8IZM8 581 aa20.24■□□□□ 0.83
CPSF4-209ENST00000465132 LZTS2Q9BRK4 669 aa20.24■□□□□ 0.83
CPSF4-209ENST00000465132 ABHD16BQ9H3Z7 469 aa20.24■□□□□ 0.83
CPSF4-209ENST00000465132 RBM28Q9NW13 759 aaKnown RBP20.24■□□□□ 0.83
CPSF4-209ENST00000465132 TMEM232C9JQI7 657 aa20.23■□□□□ 0.83
CPSF4-209ENST00000465132 ADCY6O43306 1168 aa20.23■□□□□ 0.83
CPSF4-209ENST00000465132 DHX16O60231 1041 aaKnown RBP20.23■□□□□ 0.83
CPSF4-209ENST00000465132 FPGSQ05932 587 aa20.23■□□□□ 0.83
CPSF4-209ENST00000465132 CCDC96Q2M329 555 aa20.23■□□□□ 0.83
CPSF4-209ENST00000465132 CCDC144BQ3MJ40 725 aa20.23■□□□□ 0.83
CPSF4-209ENST00000465132 ARMCX2Q7L311 632 aa20.23■□□□□ 0.83
CPSF4-209ENST00000465132 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.23■□□□□ 0.83
CPSF4-209ENST00000465132 ZNF274Q96GC6 653 aaPredicted RBP20.23■□□□□ 0.83
CPSF4-209ENST00000465132 RNPC3Q96LT9 517 aaKnown RBP20.23■□□□□ 0.83
CPSF4-209ENST00000465132 LRRC2Q9BYS8 371 aa20.23■□□□□ 0.83
CPSF4-209ENST00000465132 NAP1L2Q9ULW6 460 aaPredicted RBP20.23■□□□□ 0.83
CPSF4-209ENST00000465132 KLF18A0A0U1RQI7 1052 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 PLA2G6O60733 806 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 C6orf222P0C671 652 aaPredicted RBP20.22■□□□□ 0.83
CPSF4-209ENST00000465132 CPA1P15085 419 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 STAT2P52630 851 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 EVCP57679 992 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 IRX5P78411 483 aaPredicted RBP20.22■□□□□ 0.83
CPSF4-209ENST00000465132 IKQ13123 557 aaPredicted RBP20.22■□□□□ 0.83
CPSF4-209ENST00000465132 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
CPSF4-209ENST00000465132 ZSCAN31Q96LW9 406 aaPredicted RBP20.22■□□□□ 0.83
CPSF4-209ENST00000465132 TCEANC2Q96MN5 208 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 GLT1D1Q96MS3 346 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 UPF3AQ9H1J1 476 aaKnown RBP20.22■□□□□ 0.83
CPSF4-209ENST00000465132 TTYH1Q9H313 450 aaPredicted RBP20.22■□□□□ 0.83
CPSF4-209ENST00000465132 SPC25Q9HBM1 224 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 HOMER2Q9NSB8 354 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 PNMA2Q9UL42 364 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 A0A0C4DFX4 3053 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 ELP1O95163 1332 aa20.22■□□□□ 0.83
CPSF4-209ENST00000465132 ASGR1P07306 291 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 SNHG28P0DPA3 235 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 PDHBP11177 359 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 GJA9P57773 515 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 CNTN2Q02246 1040 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 TRAF1Q13077 416 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 APOA5Q6Q788 366 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 CCDC144CPQ8IYA2 1237 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 PCSK9Q8NBP7 692 aaKnown RBP20.21■□□□□ 0.83
CPSF4-209ENST00000465132 KATNBL1Q9H079 304 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 TBX21Q9UL17 535 aa20.21■□□□□ 0.83
CPSF4-209ENST00000465132 LAMA2P24043 3122 aaKnown RBP20.2■□□□□ 0.82
CPSF4-209ENST00000465132 GOLGA8BA8MQT2 603 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 SMARCA1P28370 1054 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 METAP2P50579 478 aaKnown RBP eCLIP20.2■□□□□ 0.82
CPSF4-209ENST00000465132 CDK7P50613 346 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 ZNF543Q08ER8 600 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 TROAPQ12815 778 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 FAM133AQ8N9E0 248 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 FANCBQ8NB91 859 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 AGBL1Q96MI9 1066 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 KIF2CQ99661 725 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 LIMCH1Q9UPQ0 1083 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 MTMR7Q9Y216 660 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 ZNF536O15090 1300 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 MROH7Q68CQ1 1323 aa20.2■□□□□ 0.82
CPSF4-209ENST00000465132 TIMP1P01033 207 aa20.19■□□□□ 0.82
CPSF4-209ENST00000465132 AK2P54819 239 aa20.19■□□□□ 0.82
CPSF4-209ENST00000465132 GRM4Q14833 912 aa20.19■□□□□ 0.82
CPSF4-209ENST00000465132 GNASQ5JWF2 1037 aa20.19■□□□□ 0.82
CPSF4-209ENST00000465132 COL25A1Q9BXS0 654 aaPredicted RBP20.19■□□□□ 0.82
CPSF4-209ENST00000465132 A1CFQ9NQ94 594 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms