RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RWDD1Q9H446 243 aaPredicted RBP26.78■■□□□ 1.88
USP42-205ENST00000465073 ZNF576Q9H609 170 aa26.78■■□□□ 1.88
USP42-205ENST00000465073 IL23AQ9NPF7 189 aa26.78■■□□□ 1.88
USP42-205ENST00000465073 ACRP10323 421 aa26.77■■□□□ 1.88
USP42-205ENST00000465073 GRIN2CQ14957 1233 aa26.77■■□□□ 1.88
USP42-205ENST00000465073 TMEM63BQ5T3F8 832 aa26.77■■□□□ 1.88
USP42-205ENST00000465073 SMC5Q8IY18 1101 aa26.77■■□□□ 1.88
USP42-205ENST00000465073 CLEC4DQ8WXI8 215 aa26.77■■□□□ 1.88
USP42-205ENST00000465073 LRRC37A2A6NM11 1700 aa26.76■■□□□ 1.88
USP42-205ENST00000465073 SNHG28P0DPA3 235 aa26.76■■□□□ 1.87
USP42-205ENST00000465073 SDSP20132 328 aa26.76■■□□□ 1.87
USP42-205ENST00000465073 TBC1D10CQ8IV04 446 aa26.76■■□□□ 1.87
USP42-205ENST00000465073 WDR11Q9BZH6 1224 aa26.76■■□□□ 1.87
USP42-205ENST00000465073 NT5C2P49902 561 aa26.75■■□□□ 1.87
USP42-205ENST00000465073 RNF207Q6ZRF8 634 aa26.75■■□□□ 1.87
USP42-205ENST00000465073 HERVK_113Q902F9 699 aa26.75■■□□□ 1.87
USP42-205ENST00000465073 ESR2Q92731 530 aa26.75■■□□□ 1.87
USP42-205ENST00000465073 TRPV6Q9H1D0 765 aa26.75■■□□□ 1.87
USP42-205ENST00000465073 WDR19Q8NEZ3 1342 aa26.75■■□□□ 1.87
USP42-205ENST00000465073 RBM47A0AV96 593 aaKnown RBP26.74■■□□□ 1.87
USP42-205ENST00000465073 CALML3P27482 149 aa26.74■■□□□ 1.87
USP42-205ENST00000465073 MPHOSPH6Q99547 160 aaKnown RBP26.74■■□□□ 1.87
USP42-205ENST00000465073 MTIF3Q9H2K0 278 aaKnown RBP26.74■■□□□ 1.87
USP42-205ENST00000465073 POLR3EQ9NVU0 708 aa26.74■■□□□ 1.87
USP42-205ENST00000465073 FGBP02675 491 aa26.74■■□□□ 1.87
USP42-205ENST00000465073 PSMC6P62333 389 aa26.74■■□□□ 1.87
USP42-205ENST00000465073 GPATCH4Q5T3I0 446 aaKnown RBP26.74■■□□□ 1.87
USP42-205ENST00000465073 SLC30A10Q6XR72 485 aa26.74■■□□□ 1.87
USP42-205ENST00000465073 DGKHQ86XP1 1220 aa26.74■■□□□ 1.87
USP42-205ENST00000465073 NOC4LQ9BVI4 516 aaKnown RBP26.74■■□□□ 1.87
USP42-205ENST00000465073 PBX4Q9BYU1 374 aa26.74■■□□□ 1.87
USP42-205ENST00000465073 EYSQ5T1H1 3165 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 GRXCR1A8MXD5 290 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 ZNF213O14771 459 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 B4GALT4O60513 344 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 CPT1AP50416 773 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 RPS6P62753 249 aaKnown RBP26.73■■□□□ 1.87
USP42-205ENST00000465073 B4GALNT3Q6L9W6 998 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 CHD1LQ86WJ1 897 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 DNERQ8NFT8 737 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 OSBPL3Q9H4L5 887 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 LCTP09848 1927 aa26.73■■□□□ 1.87
USP42-205ENST00000465073 PBX2P40425 430 aa26.72■■□□□ 1.87
USP42-205ENST00000465073 PDE4DQ08499 809 aa26.72■■□□□ 1.87
USP42-205ENST00000465073 CCDC178Q5BJE1 867 aa26.72■■□□□ 1.87
USP42-205ENST00000465073 PLEKHM2Q8IWE5 1019 aa26.72■■□□□ 1.87
USP42-205ENST00000465073 ALDH8A1Q9H2A2 487 aaPredicted RBP26.72■■□□□ 1.87
USP42-205ENST00000465073 UMODL1Q5DID0 1318 aa26.72■■□□□ 1.87
USP42-205ENST00000465073 CDH23Q9H251 3354 aa26.72■■□□□ 1.87
USP42-205ENST00000465073 B4DLN1 442 aa26.71■■□□□ 1.87
USP42-205ENST00000465073 NKRFO15226 690 aaKnown RBP eCLIP26.71■■□□□ 1.87
USP42-205ENST00000465073 MRPL12P52815 198 aaKnown RBP26.71■■□□□ 1.87
USP42-205ENST00000465073 BRDTQ58F21 947 aaPredicted RBP26.71■■□□□ 1.87
USP42-205ENST00000465073 RGS22Q8NE09 1264 aa26.71■■□□□ 1.87
USP42-205ENST00000465073 NEDD4P46934 1319 aa26.71■■□□□ 1.87
USP42-205ENST00000465073 PRUNE2Q8WUY3 3088 aa26.71■■□□□ 1.87
USP42-205ENST00000465073 SUPT20HL2P0C7V6 817 aa26.7■■□□□ 1.87
USP42-205ENST00000465073 EDNRBP24530 442 aa26.7■■□□□ 1.87
USP42-205ENST00000465073 CCL23P55773 120 aa26.7■■□□□ 1.87
USP42-205ENST00000465073 PURAQ00577 322 aaKnown RBP26.7■■□□□ 1.87
USP42-205ENST00000465073 NUCB1Q02818 461 aa26.7■■□□□ 1.87
USP42-205ENST00000465073 RAB30Q15771 203 aa26.7■■□□□ 1.87
USP42-205ENST00000465073 IQCA1Q86XH1 822 aa26.7■■□□□ 1.87
USP42-205ENST00000465073 RPUSD2Q8IZ73 545 aaKnown RBP26.7■■□□□ 1.87
USP42-205ENST00000465073 SCFD2Q8WU76 684 aa26.7■■□□□ 1.87
USP42-205ENST00000465073 ZKSCAN3Q9BRR0 538 aa26.7■■□□□ 1.87
USP42-205ENST00000465073 GPHNQ9NQX3 736 aaPredicted RBP26.7■■□□□ 1.87
USP42-205ENST00000465073 MSRAQ9UJ68 235 aa26.7■■□□□ 1.87
USP42-205ENST00000465073 OR6J1Q8NGC5 347 aa26.69■■□□□ 1.86
USP42-205ENST00000465073 MTG1Q9BT17 334 aaPredicted RBP26.69■■□□□ 1.86
USP42-205ENST00000465073 MAF1Q9H063 256 aa26.69■■□□□ 1.86
USP42-205ENST00000465073 WNT8AQ9H1J5 351 aa26.69■■□□□ 1.86
USP42-205ENST00000465073 DIAPH3Q9NSV4 1193 aa26.69■■□□□ 1.86
USP42-205ENST00000465073 CXXC1Q9P0U4 656 aaPredicted RBP26.69■■□□□ 1.86
USP42-205ENST00000465073 RAD50Q92878 1312 aa26.69■■□□□ 1.86
USP42-205ENST00000465073 HIP1O00291 1037 aa26.68■■□□□ 1.86
USP42-205ENST00000465073 MYL3P08590 195 aa26.68■■□□□ 1.86
USP42-205ENST00000465073 GOLGA8HP0CJ92 632 aa26.68■■□□□ 1.86
USP42-205ENST00000465073 PPP2R5BQ15173 497 aa26.68■■□□□ 1.86
USP42-205ENST00000465073 CWC27Q6UX04 472 aaKnown RBP26.68■■□□□ 1.86
USP42-205ENST00000465073 KPNA6O60684 536 aa26.68■■□□□ 1.86
USP42-205ENST00000465073 OTOP2Q7RTS6 562 aa26.68■■□□□ 1.86
USP42-205ENST00000465073 PNMA1Q8ND90 353 aa26.68■■□□□ 1.86
USP42-205ENST00000465073 ANKS1AQ92625 1134 aa26.68■■□□□ 1.86
USP42-205ENST00000465073 GAS2L1Q99501 681 aaPredicted RBP26.68■■□□□ 1.86
USP42-205ENST00000465073 UBA5Q9GZZ9 404 aa26.68■■□□□ 1.86
USP42-205ENST00000465073 KDM4AO75164 1064 aa26.67■■□□□ 1.86
USP42-205ENST00000465073 IGHDP01880 384 aa26.67■■□□□ 1.86
USP42-205ENST00000465073 USH1GQ495M9 461 aa26.67■■□□□ 1.86
USP42-205ENST00000465073 KAT14Q9H8E8 782 aa26.67■■□□□ 1.86
USP42-205ENST00000465073 TNKSO95271 1327 aa26.66■■□□□ 1.86
USP42-205ENST00000465073 TRMT13Q9NUP7 481 aaKnown RBP26.66■■□□□ 1.86
USP42-205ENST00000465073 A6NJR5 290 aa26.65■■□□□ 1.86
USP42-205ENST00000465073 TXNP10599 105 aaKnown RBP26.65■■□□□ 1.86
USP42-205ENST00000465073 ZSCAN10Q96SZ4 725 aaPredicted RBP26.65■■□□□ 1.86
USP42-205ENST00000465073 DSCC1Q9BVC3 393 aa26.65■■□□□ 1.86
USP42-205ENST00000465073 CPVLQ9H3G5 476 aa26.65■■□□□ 1.86
USP42-205ENST00000465073 ABCB11O95342 1321 aa26.64■■□□□ 1.86
USP42-205ENST00000465073 PFKMP08237 780 aa26.64■■□□□ 1.86
USP42-205ENST00000465073 CYP2C9P11712 490 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms