RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 CDC27P30260 824 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 NEK4P51957 841 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 CCL14Q16627 93 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 CCDC144CPQ8IYA2 1237 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 FGD4Q96M96 766 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 KIF2CQ99661 725 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.83■□□□□ 0.12
LIMD1-203ENST00000465039 FLRT1Q9NZU1 646 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 CNPY2Q9Y2B0 182 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 LCTP09848 1927 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 PTPDC1A2A3K4 754 aa15.82■□□□□ 0.12
LIMD1-203ENST00000465039 OPLAHO14841 1288 aa15.82■□□□□ 0.12
LIMD1-203ENST00000465039 PFKFB2O60825 505 aa15.82■□□□□ 0.12
LIMD1-203ENST00000465039 AK2P54819 239 aa15.82■□□□□ 0.12
LIMD1-203ENST00000465039 CACNB2Q08289 660 aaPredicted RBP15.82■□□□□ 0.12
LIMD1-203ENST00000465039 BAATQ14032 418 aaPredicted RBP15.82■□□□□ 0.12
LIMD1-203ENST00000465039 NTRK3Q16288 839 aa15.82■□□□□ 0.12
LIMD1-203ENST00000465039 TRIM22Q8IYM9 498 aa15.82■□□□□ 0.12
LIMD1-203ENST00000465039 CCDC12Q8WUD4 166 aaPredicted RBP15.82■□□□□ 0.12
LIMD1-203ENST00000465039 IWS1Q96ST2 819 aa15.82■□□□□ 0.12
LIMD1-203ENST00000465039 ABHD16BQ9H3Z7 469 aa15.82■□□□□ 0.12
LIMD1-203ENST00000465039 NAP1L2Q9ULW6 460 aaPredicted RBP15.82■□□□□ 0.12
LIMD1-203ENST00000465039 ESYT2A0FGR8 921 aa15.81■□□□□ 0.12
LIMD1-203ENST00000465039 CPLX1O14810 134 aa15.81■□□□□ 0.12
LIMD1-203ENST00000465039 SEPT4O43236 478 aa15.81■□□□□ 0.12
LIMD1-203ENST00000465039 PRPF3O43395 683 aaKnown RBP15.81■□□□□ 0.12
LIMD1-203ENST00000465039 EDNRBP24530 442 aa15.81■□□□□ 0.12
LIMD1-203ENST00000465039 ADD1P35611 737 aaKnown RBP15.81■□□□□ 0.12
LIMD1-203ENST00000465039 GJA8P48165 433 aa15.81■□□□□ 0.12
LIMD1-203ENST00000465039 PFKFB3Q16875 520 aaPredicted RBP15.81■□□□□ 0.12
LIMD1-203ENST00000465039 MCTP2Q6DN12 878 aa15.81■□□□□ 0.12
LIMD1-203ENST00000465039 SLC30A10Q6XR72 485 aa15.81■□□□□ 0.12
LIMD1-203ENST00000465039 NSUN6Q8TEA1 469 aaKnown RBP15.81■□□□□ 0.12
LIMD1-203ENST00000465039 RNF208Q9H0X6 261 aa15.81■□□□□ 0.12
LIMD1-203ENST00000465039 LRRC37A2A6NM11 1700 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 FRMPD4Q14CM0 1322 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 STK36Q9NRP7 1315 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 SOWAHBA6NEL2 793 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 GCOM1H8Y6P7 765 aaPredicted RBP15.8■□□□□ 0.12
LIMD1-203ENST00000465039 POLR2MP0CAP2 368 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 CYP2C19P33261 490 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 ALDH5A1P51649 535 aaPredicted RBP15.8■□□□□ 0.12
LIMD1-203ENST00000465039 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
LIMD1-203ENST00000465039 CNTN2Q02246 1040 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 ARMCX2Q7L311 632 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 RAB11FIP4Q86YS3 637 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 ANKLE1Q8NAG6 615 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 SYTL5Q8TDW5 730 aaPredicted RBP15.8■□□□□ 0.12
LIMD1-203ENST00000465039 CRISPLD2Q9H0B8 497 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 UNC93B1Q9H1C4 597 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 SLKQ9H2G2 1235 aaPredicted RBP15.8■□□□□ 0.12
LIMD1-203ENST00000465039 VTA1Q9NP79 307 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.8■□□□□ 0.12
LIMD1-203ENST00000465039 BARHL2Q9NY43 387 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 TPCN1Q9ULQ1 816 aa15.8■□□□□ 0.12
LIMD1-203ENST00000465039 V9GY48 417 aaPredicted RBP15.8■□□□□ 0.12
LIMD1-203ENST00000465039 ASTN1O14525 1302 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 CCDC85CA6NKD9 419 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 ST18O60284 1047 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 SCG2P13521 617 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 CALML3P27482 149 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 MCM2P49736 904 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 MTFR1Q15390 333 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 CMTR1Q8N1G2 835 aaKnown RBP15.79■□□□□ 0.12
LIMD1-203ENST00000465039 CCDC148Q8NFR7 591 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 CUL5Q93034 780 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
LIMD1-203ENST00000465039 SH3GLB2Q9NR46 395 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
LIMD1-203ENST00000465039 LIMCH1Q9UPQ0 1083 aa15.79■□□□□ 0.12
LIMD1-203ENST00000465039 DEXIO95424 95 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 SGPL1O95470 568 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 SNAI1O95863 264 aaPredicted RBP15.78■□□□□ 0.12
LIMD1-203ENST00000465039 CFBP00751 764 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 AKR1A1P14550 325 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 TRIM32Q13049 653 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 XRRA1Q6P2D8 792 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 HEATR3Q7Z4Q2 680 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 CCDC82Q8N4S0 544 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 U2AF1L4Q8WU68 220 aaKnown RBP15.78■□□□□ 0.12
LIMD1-203ENST00000465039 GTF3C6Q969F1 213 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 RMDN3Q96TC7 470 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 KATNBL1Q9H079 304 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 PSTPIP2Q9H939 334 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 DDX20Q9UHI6 824 aaKnown RBP15.78■□□□□ 0.12
LIMD1-203ENST00000465039 MCM3APO60318 1980 aa15.78■□□□□ 0.12
LIMD1-203ENST00000465039 STAM2O75886 525 aa15.77■□□□□ 0.12
LIMD1-203ENST00000465039 ZNF865P0CJ78 1059 aaPredicted RBP15.77■□□□□ 0.12
LIMD1-203ENST00000465039 TAL1P17542 331 aaPredicted RBP15.77■□□□□ 0.12
LIMD1-203ENST00000465039 RGS19P49795 217 aa15.77■□□□□ 0.12
LIMD1-203ENST00000465039 CCT2P78371 535 aaKnown RBP15.77■□□□□ 0.12
LIMD1-203ENST00000465039 SCRN1Q12765 414 aa15.77■□□□□ 0.12
LIMD1-203ENST00000465039 ACVR2BQ13705 512 aa15.77■□□□□ 0.12
LIMD1-203ENST00000465039 WWC2Q6AWC2 1192 aa15.77■□□□□ 0.12
LIMD1-203ENST00000465039 RIC8AQ9NPQ8 531 aa15.77■□□□□ 0.12
LIMD1-203ENST00000465039 OGDHLQ9ULD0 1010 aa15.77■□□□□ 0.12
LIMD1-203ENST00000465039 BRCA2P51587 3418 aa15.77■□□□□ 0.11
LIMD1-203ENST00000465039 FRMPD3Q5JV73 1810 aa15.77■□□□□ 0.11
LIMD1-203ENST00000465039 STXBP3O00186 592 aa15.76■□□□□ 0.11
LIMD1-203ENST00000465039 FOSP01100 380 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms