RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 MAMDC4Q6UXC1 1216 aa31.92■■■□□ 2.7
CHRD-211ENST00000464833 MSL3Q8N5Y2 521 aaKnown RBP31.92■■■□□ 2.7
CHRD-211ENST00000464833 PURBQ96QR8 312 aaKnown RBP31.92■■■□□ 2.7
CHRD-211ENST00000464833 TINF2Q9BSI4 451 aa31.92■■■□□ 2.7
CHRD-211ENST00000464833 MYCP01106 439 aaPredicted RBP31.91■■■□□ 2.7
CHRD-211ENST00000464833 CALML3P27482 149 aa31.91■■■□□ 2.7
CHRD-211ENST00000464833 UNC93B1Q9H1C4 597 aa31.91■■■□□ 2.7
CHRD-211ENST00000464833 CCL5P13501 91 aa31.9■■■□□ 2.7
CHRD-211ENST00000464833 HSD17B4P51659 736 aa31.9■■■□□ 2.7
CHRD-211ENST00000464833 SCRN1Q12765 414 aa31.9■■■□□ 2.7
CHRD-211ENST00000464833 NOL8Q76FK4 1167 aaKnown RBP31.9■■■□□ 2.7
CHRD-211ENST00000464833 SLKQ9H2G2 1235 aaPredicted RBP31.9■■■□□ 2.7
CHRD-211ENST00000464833 RPTORQ8N122 1335 aa31.89■■■□□ 2.7
CHRD-211ENST00000464833 SYNGAP1Q96PV0 1343 aa31.89■■■□□ 2.7
CHRD-211ENST00000464833 PRPF3O43395 683 aaKnown RBP31.89■■■□□ 2.7
CHRD-211ENST00000464833 LARGE1O95461 756 aa31.89■■■□□ 2.7
CHRD-211ENST00000464833 ME3Q16798 604 aa31.89■■■□□ 2.7
CHRD-211ENST00000464833 SAMD3Q8N6K7 520 aa31.89■■■□□ 2.7
CHRD-211ENST00000464833 SYTL5Q8TDW5 730 aaPredicted RBP31.89■■■□□ 2.7
CHRD-211ENST00000464833 PHKBQ93100 1093 aa31.89■■■□□ 2.7
CHRD-211ENST00000464833 CCDC85CA6NKD9 419 aa31.88■■■□□ 2.69
CHRD-211ENST00000464833 CYBAP13498 195 aa31.88■■■□□ 2.69
CHRD-211ENST00000464833 WWC2Q6AWC2 1192 aa31.88■■■□□ 2.69
CHRD-211ENST00000464833 HEATR3Q7Z4Q2 680 aa31.88■■■□□ 2.69
CHRD-211ENST00000464833 GPKOWQ92917 476 aaPredicted RBP eCLIP31.88■■■□□ 2.69
CHRD-211ENST00000464833 RNF26Q9BY78 433 aaPredicted RBP31.88■■■□□ 2.69
CHRD-211ENST00000464833 MAP3K20Q9NYL2 800 aaKnown RBP31.88■■■□□ 2.69
CHRD-211ENST00000464833 COL20A1Q9P218 1284 aa31.88■■■□□ 2.69
CHRD-211ENST00000464833 RBM27Q9P2N5 1060 aaKnown RBP31.88■■■□□ 2.69
CHRD-211ENST00000464833 CFBP00751 764 aa31.87■■■□□ 2.69
CHRD-211ENST00000464833 TRPV1Q8NER1 839 aa31.87■■■□□ 2.69
CHRD-211ENST00000464833 HMX1Q9NP08 348 aaPredicted RBP31.87■■■□□ 2.69
CHRD-211ENST00000464833 PAK6Q9NQU5 681 aaPredicted RBP31.87■■■□□ 2.69
CHRD-211ENST00000464833 ADD3Q9UEY8 706 aaKnown RBP31.87■■■□□ 2.69
CHRD-211ENST00000464833 CPLX1O14810 134 aa31.86■■■□□ 2.69
CHRD-211ENST00000464833 SNAI1O95863 264 aaPredicted RBP31.86■■■□□ 2.69
CHRD-211ENST00000464833 PKN1Q16512 942 aa31.86■■■□□ 2.69
CHRD-211ENST00000464833 PFKFB3Q16875 520 aaPredicted RBP31.86■■■□□ 2.69
CHRD-211ENST00000464833 ARMCX2Q7L311 632 aa31.86■■■□□ 2.69
CHRD-211ENST00000464833 IL27Q8NEV9 243 aa31.86■■■□□ 2.69
CHRD-211ENST00000464833 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.86■■■□□ 2.69
CHRD-211ENST00000464833 RNF208Q9H0X6 261 aa31.86■■■□□ 2.69
CHRD-211ENST00000464833 NRBP1Q9UHY1 535 aa31.86■■■□□ 2.69
CHRD-211ENST00000464833 LIMCH1Q9UPQ0 1083 aa31.86■■■□□ 2.69
CHRD-211ENST00000464833 LRRC37A2A6NM11 1700 aa31.86■■■□□ 2.69
CHRD-211ENST00000464833 LOC102724159A0A0B4J2E5 919 aa31.85■■■□□ 2.69
CHRD-211ENST00000464833 hCG_1984214I3L0E3 225 aa31.85■■■□□ 2.69
CHRD-211ENST00000464833 PPFIA3O75145 1194 aa31.85■■■□□ 2.69
CHRD-211ENST00000464833 CCND3P30281 292 aaPredicted RBP31.85■■■□□ 2.69
CHRD-211ENST00000464833 ALDH5A1P51649 535 aaPredicted RBP31.85■■■□□ 2.69
CHRD-211ENST00000464833 PWP2Q15269 919 aaKnown RBP31.85■■■□□ 2.69
CHRD-211ENST00000464833 TYW1BQ6NUM6 668 aa31.85■■■□□ 2.69
CHRD-211ENST00000464833 ZNF713Q8N859 430 aaPredicted RBP31.85■■■□□ 2.69
CHRD-211ENST00000464833 DNERQ8NFT8 737 aa31.85■■■□□ 2.69
CHRD-211ENST00000464833 MORC4Q8TE76 937 aa31.85■■■□□ 2.69
CHRD-211ENST00000464833 SLC26A6Q9BXS9 759 aa31.85■■■□□ 2.69
CHRD-211ENST00000464833 ASB14A6NK59 587 aa31.84■■■□□ 2.69
CHRD-211ENST00000464833 STXBP3O00186 592 aa31.84■■■□□ 2.69
CHRD-211ENST00000464833 SCG2P13521 617 aa31.84■■■□□ 2.69
CHRD-211ENST00000464833 PRAMEF19Q5SWL8 479 aa31.84■■■□□ 2.69
CHRD-211ENST00000464833 CPLX2Q6PUV4 134 aaKnown RBP31.84■■■□□ 2.69
CHRD-211ENST00000464833 GTF3C6Q969F1 213 aa31.84■■■□□ 2.69
CHRD-211ENST00000464833 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.84■■■□□ 2.69
CHRD-211ENST00000464833 BARHL2Q9NY43 387 aa31.84■■■□□ 2.69
CHRD-211ENST00000464833 BRCA2P51587 3418 aa31.84■■■□□ 2.69
CHRD-211ENST00000464833 GCOM1H8Y6P7 765 aaPredicted RBP31.83■■■□□ 2.69
CHRD-211ENST00000464833 POLR2MP0CAP2 368 aa31.83■■■□□ 2.69
CHRD-211ENST00000464833 HOXA13P31271 388 aaPredicted RBP31.83■■■□□ 2.69
CHRD-211ENST00000464833 PPP1R18Q6NYC8 613 aa31.83■■■□□ 2.69
CHRD-211ENST00000464833 NECAB1Q8N987 351 aa31.83■■■□□ 2.69
CHRD-211ENST00000464833 TAAR1Q96RJ0 339 aa31.83■■■□□ 2.69
CHRD-211ENST00000464833 TMEM106CQ9BVX2 250 aa31.83■■■□□ 2.69
CHRD-211ENST00000464833 DDX49Q9Y6V7 483 aaKnown RBP31.83■■■□□ 2.69
CHRD-211ENST00000464833 GJB1P08034 283 aa31.82■■■□□ 2.68
CHRD-211ENST00000464833 AKAP17AQ02040 695 aaKnown RBP31.82■■■□□ 2.68
CHRD-211ENST00000464833 CNPY2Q9Y2B0 182 aa31.82■■■□□ 2.68
CHRD-211ENST00000464833 PIK3CDO00329 1044 aa31.81■■■□□ 2.68
CHRD-211ENST00000464833 CTDNEP1O95476 244 aa31.81■■■□□ 2.68
CHRD-211ENST00000464833 ZNF865P0CJ78 1059 aaPredicted RBP31.81■■■□□ 2.68
CHRD-211ENST00000464833 EDNRBP24530 442 aa31.81■■■□□ 2.68
CHRD-211ENST00000464833 NAPAP54920 295 aa31.81■■■□□ 2.68
CHRD-211ENST00000464833 SSRP1Q08945 709 aaKnown RBP31.81■■■□□ 2.68
CHRD-211ENST00000464833 TRIM22Q8IYM9 498 aa31.81■■■□□ 2.68
CHRD-211ENST00000464833 KATNBL1Q9H079 304 aa31.81■■■□□ 2.68
CHRD-211ENST00000464833 PSTPIP2Q9H939 334 aa31.81■■■□□ 2.68
CHRD-211ENST00000464833 POTEFA5A3E0 1075 aa31.8■■■□□ 2.68
CHRD-211ENST00000464833 MEIS2O14770 477 aa31.8■■■□□ 2.68
CHRD-211ENST00000464833 ST18O60284 1047 aa31.8■■■□□ 2.68
CHRD-211ENST00000464833 CDKL5O76039 1030 aa31.8■■■□□ 2.68
CHRD-211ENST00000464833 ST3GAL1Q11201 340 aa31.8■■■□□ 2.68
CHRD-211ENST00000464833 ABHD16BQ9H3Z7 469 aa31.8■■■□□ 2.68
CHRD-211ENST00000464833 FRMPD3Q5JV73 1810 aa31.8■■■□□ 2.68
CHRD-211ENST00000464833 USP17L6PQ6QN14 398 aa31.79■■■□□ 2.68
CHRD-211ENST00000464833 NSUN6Q8TEA1 469 aaKnown RBP31.79■■■□□ 2.68
CHRD-211ENST00000464833 DEFB118Q96PH6 123 aa31.79■■■□□ 2.68
CHRD-211ENST00000464833 RMDN3Q96TC7 470 aa31.79■■■□□ 2.68
CHRD-211ENST00000464833 SOX10P56693 466 aa31.78■■■□□ 2.68
CHRD-211ENST00000464833 ZSCAN31Q96LW9 406 aaPredicted RBP31.78■■■□□ 2.68
CHRD-211ENST00000464833 PXMP2Q9NR77 195 aa31.78■■■□□ 2.68
CHRD-211ENST00000464833 STK36Q9NRP7 1315 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms