RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 ZNF213O14771 459 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 CD4P01730 458 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 ACRP10323 421 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 CSF2RAP15509 400 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 PDE4AP27815 886 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 MYLIPQ8WY64 445 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 ESR2Q92731 530 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 AP5M1Q9H0R1 490 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 RNF41Q9H4P4 317 aaPredicted RBP17.04■□□□□ 0.32
ALMS1-202ENST00000464408 GBF1Q92538 1859 aa17.03■□□□□ 0.32
ALMS1-202ENST00000464408 PCP11498 1178 aaKnown RBP17.03■□□□□ 0.32
ALMS1-202ENST00000464408 CYP2C18P33260 490 aa17.03■□□□□ 0.32
ALMS1-202ENST00000464408 MFAP1P55081 439 aaKnown RBP17.03■□□□□ 0.32
ALMS1-202ENST00000464408 ITGA7Q13683 1181 aa17.03■□□□□ 0.32
ALMS1-202ENST00000464408 USH1GQ495M9 461 aa17.03■□□□□ 0.32
ALMS1-202ENST00000464408 TMEM240Q5SV17 173 aa17.03■□□□□ 0.32
ALMS1-202ENST00000464408 IQSEC1Q6DN90 963 aa17.03■□□□□ 0.32
ALMS1-202ENST00000464408 RNF207Q6ZRF8 634 aa17.03■□□□□ 0.32
ALMS1-202ENST00000464408 TRPV6Q9H1D0 765 aa17.03■□□□□ 0.32
ALMS1-202ENST00000464408 MYO9BQ13459 2157 aa17.03■□□□□ 0.32
ALMS1-202ENST00000464408 GRXCR1A8MXD5 290 aa17.02■□□□□ 0.32
ALMS1-202ENST00000464408 RPS6P62753 249 aaKnown RBP17.02■□□□□ 0.32
ALMS1-202ENST00000464408 DUSP28Q4G0W2 176 aa17.02■□□□□ 0.32
ALMS1-202ENST00000464408 PNMA1Q8ND90 353 aa17.02■□□□□ 0.32
ALMS1-202ENST00000464408 PPP1R13LQ8WUF5 828 aa17.02■□□□□ 0.32
ALMS1-202ENST00000464408 WDR11Q9BZH6 1224 aa17.02■□□□□ 0.32
ALMS1-202ENST00000464408 ADD3Q9UEY8 706 aaKnown RBP17.02■□□□□ 0.32
ALMS1-202ENST00000464408 WDR19Q8NEZ3 1342 aa17.01■□□□□ 0.31
ALMS1-202ENST00000464408 SCN10AQ9Y5Y9 1956 aa17.01■□□□□ 0.31
ALMS1-202ENST00000464408 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
ALMS1-202ENST00000464408 B4GALT4O60513 344 aa17.01■□□□□ 0.31
ALMS1-202ENST00000464408 GSPT1P15170 499 aaKnown RBP17.01■□□□□ 0.31
ALMS1-202ENST00000464408 PPIGQ13427 754 aaKnown RBP eCLIP17.01■□□□□ 0.31
ALMS1-202ENST00000464408 DGKHQ86XP1 1220 aa17.01■□□□□ 0.31
ALMS1-202ENST00000464408 ENAHQ8N8S7 591 aaPredicted RBP17.01■□□□□ 0.31
ALMS1-202ENST00000464408 TBC1D5Q92609 795 aa17.01■□□□□ 0.31
ALMS1-202ENST00000464408 COPS5Q92905 334 aa17.01■□□□□ 0.31
ALMS1-202ENST00000464408 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
ALMS1-202ENST00000464408 DSCC1Q9BVC3 393 aa17.01■□□□□ 0.31
ALMS1-202ENST00000464408 Q9Y3F1 56 aa17.01■□□□□ 0.31
ALMS1-202ENST00000464408 SCN5AQ14524 2016 aa17.01■□□□□ 0.31
ALMS1-202ENST00000464408 RBM47A0AV96 593 aaKnown RBP17■□□□□ 0.31
ALMS1-202ENST00000464408 CABYRO75952 493 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 EDNRBP24530 442 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 DNAJB2P25686 324 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 PBX2P40425 430 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 CDC37Q16543 378 aaPredicted RBP17■□□□□ 0.31
ALMS1-202ENST00000464408 GPATCH4Q5T3I0 446 aaKnown RBP17■□□□□ 0.31
ALMS1-202ENST00000464408 RASIP1Q5U651 963 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 ZNF365Q70YC5 407 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 TMEM199Q8N511 208 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 ANKS1AQ92625 1134 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 KAT14Q9H8E8 782 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 ZSWIM5Q9P217 1185 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 COL20A1Q9P218 1284 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 SUPT16HQ9Y5B9 1047 aaKnown RBP17■□□□□ 0.31
ALMS1-202ENST00000464408 KIAA1217Q5T5P2 1943 aa17■□□□□ 0.31
ALMS1-202ENST00000464408 TNKSO95271 1327 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.99■□□□□ 0.31
ALMS1-202ENST00000464408 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.99■□□□□ 0.31
ALMS1-202ENST00000464408 ZEB2O60315 1214 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 MYL3P08590 195 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 CCL23P55773 120 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 IRX6P78412 446 aaPredicted RBP16.99■□□□□ 0.31
ALMS1-202ENST00000464408 PDE4DQ08499 809 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 GRIN2CQ14957 1233 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 IQCA1Q86XH1 822 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.99■□□□□ 0.31
ALMS1-202ENST00000464408 ADGRF4Q8IZF3 695 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 MAFAQ8NHW3 353 aaPredicted RBP16.99■□□□□ 0.31
ALMS1-202ENST00000464408 NOC4LQ9BVI4 516 aaKnown RBP16.99■□□□□ 0.31
ALMS1-202ENST00000464408 WNT8AQ9H1J5 351 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 HIPK3Q9H422 1215 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 TRMT13Q9NUP7 481 aaKnown RBP16.99■□□□□ 0.31
ALMS1-202ENST00000464408 CXXC1Q9P0U4 656 aaPredicted RBP16.99■□□□□ 0.31
ALMS1-202ENST00000464408 CHD9Q3L8U1 2897 aa16.99■□□□□ 0.31
ALMS1-202ENST00000464408 BAZ2BQ9UIF8 2168 aaKnown RBP16.98■□□□□ 0.31
ALMS1-202ENST00000464408 HIP1O00291 1037 aa16.98■□□□□ 0.31
ALMS1-202ENST00000464408 ARIH2O95376 493 aa16.98■□□□□ 0.31
ALMS1-202ENST00000464408 PURAQ00577 322 aaKnown RBP16.98■□□□□ 0.31
ALMS1-202ENST00000464408 IMMTQ16891 758 aaKnown RBP16.98■□□□□ 0.31
ALMS1-202ENST00000464408 CYB5R4Q7L1T6 521 aa16.98■□□□□ 0.31
ALMS1-202ENST00000464408 OR6J1Q8NGC5 347 aa16.98■□□□□ 0.31
ALMS1-202ENST00000464408 VWCEQ96DN2 955 aa16.98■□□□□ 0.31
ALMS1-202ENST00000464408 IL23AQ9NPF7 189 aa16.98■□□□□ 0.31
ALMS1-202ENST00000464408 LOC102724159A0A0B4J2E5 919 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 PPP2R5BQ15173 497 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 PWP2Q15269 919 aaKnown RBP16.97■□□□□ 0.31
ALMS1-202ENST00000464408 QRICH1Q2TAL8 776 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 STAG2Q8N3U4 1231 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 SCLYQ96I15 445 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 TAAR1Q96RJ0 339 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 PBX4Q9BYU1 374 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 ALDH8A1Q9H2A2 487 aaPredicted RBP16.97■□□□□ 0.31
ALMS1-202ENST00000464408 JMJD4Q9H9V9 463 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 VAT1LQ9HCJ6 419 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 TAF6LQ9Y6J9 622 aa16.97■□□□□ 0.31
ALMS1-202ENST00000464408 SPTBN5Q9NRC6 3674 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms