RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TMPRSS4Q9NRS4 437 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 LCMT1Q9UIC8 334 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 LUC7L2Q9Y383 392 aaKnown RBP8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 PXDNQ92626 1479 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 MYO5AQ9Y4I1 1855 aaKnown RBP8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 CDHR2Q9BYE9 1310 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 MST1RQ04912 1400 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 TJP1Q07157 1748 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 TIAM2Q8IVF5 1701 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 H0YHG0 523 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 FANCGO15287 622 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 EIF3HO15372 352 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 TACC1O75410 805 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 PRPF6O94906 941 aaKnown RBP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 NDUFA10O95299 355 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 CCDC172P0C7W6 258 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 PCP11498 1178 aaKnown RBP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 TCP1P17987 556 aaKnown RBP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 TNFRSF8P28908 595 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 CASP14P31944 242 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 KRT9P35527 623 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 PAFAH1B1P43034 410 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 DNM2P50570 870 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 MNAT1P51948 309 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 EPHB4P54760 987 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 ANTXR2P58335 489 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 FOXO4P98177 505 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 FMR1Q06787 632 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 PDE4BQ07343 736 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 KIF5AQ12840 1032 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 CUL4BQ13620 913 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 COL9A3Q14050 684 aaPredicted RBP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 CCNI2Q6ZMN8 369 aaPredicted RBP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 ARHGAP27Q6ZUM4 889 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 ARMC9Q7Z3E5 817 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 MMGT1Q8N4V1 131 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 OTUD6BQ8N6M0 293 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 NFATC2IPQ8NCF5 419 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 BANK1Q8NDB2 785 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 TRIM58Q8NG06 486 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 OSBP2Q969R2 916 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 CABS1Q96KC9 395 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 PAGR1Q9BTK6 254 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 RNF26Q9BY78 433 aaPredicted RBP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 THAP9Q9H5L6 903 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 ACTR5Q9H9F9 607 aaPredicted RBP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 MAGEF1Q9HAY2 307 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 STRN4Q9NRL3 753 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 RBM28Q9NW13 759 aaKnown RBP8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 FAM169AQ9Y6X4 670 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 NUP188Q5SRE5 1749 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 UBN2Q6ZU65 1347 aa8.03□□□□□ -1.12
CLSTN1-204ENST00000464286 MYH6P13533 1939 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 MYH8P13535 1937 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 BICDL2A1A5D9 508 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 ZBBXA8MT70 800 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 KCNJ18B7U540 433 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 IFIT3O14879 490 aaKnown RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 SPINT1O43278 529 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 FGFR1OPO95684 399 aaKnown RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 GCP02774 474 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 GYPCP04921 128 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 APPP05067 770 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 KRT2P35908 639 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 MMP14P50281 582 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 IRAK1P51617 712 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 VAV2P52735 878 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 COPB1P53618 953 aaKnown RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 HAND2P61296 217 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 DDR1Q08345 913 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 IFFO1Q0D2I5 559 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 KCNJ12Q14500 433 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 WTAPQ15007 396 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 NTRK3Q16288 839 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 FIGNQ5HY92 759 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 CCDC122Q5T0U0 273 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 SLC9C2Q5TAH2 1124 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 ZNF658Q5TYW1 1059 aaPredicted RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 MFSD6Q6ZSS7 791 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 ZNF572Q7Z3I7 529 aaPredicted RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 MICU3Q86XE3 530 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 FOXP4Q8IVH2 680 aaPredicted RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 IFT20Q8IY31 132 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 CNPY4Q8N129 248 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 STK11IPQ8N1F8 1099 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 EIF1ADQ8N9N8 165 aaKnown RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 GIMAP7Q8NHV1 300 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 CPLX3Q8WVH0 158 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 ZNF622Q969S3 477 aaKnown RBP eCLIP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 JAKMIP2Q96AA8 810 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 XAGE2Q96GT9 111 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 PAGE5Q96GU1 130 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 AGBL1Q96MI9 1066 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 CLIC6Q96NY7 704 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 DNAJC7Q99615 494 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 SELENOOQ9BVL4 669 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 PLA2G12BQ9BX93 195 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 EPC1Q9H2F5 836 aa8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 SAMSN1Q9NSI8 373 aaKnown RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 CAPN11Q9UMQ6 739 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms