RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 GHRHRQ02643 423 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 TRAF1Q13077 416 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 PFKFB3Q16875 520 aaPredicted RBP21.87■■□□□ 1.09
LMNB1-204ENST00000463908 OLFML2BQ68BL8 750 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 WWC2Q6AWC2 1192 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 TYW1BQ6NUM6 668 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 MCF2L2Q86YR7 1114 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 TRMT44Q8IYL2 757 aaKnown RBP21.87■■□□□ 1.09
LMNB1-204ENST00000463908 GPKOWQ92917 476 aaPredicted RBP eCLIP21.87■■□□□ 1.09
LMNB1-204ENST00000463908 ZNF333Q96JL9 665 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 SLC26A6Q9BXS9 759 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 MAF1Q9H063 256 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 COL20A1Q9P218 1284 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 HTTP42858 3142 aa21.87■■□□□ 1.09
LMNB1-204ENST00000463908 HMGCRP04035 888 aa21.86■■□□□ 1.09
LMNB1-204ENST00000463908 INHAP05111 366 aa21.86■■□□□ 1.09
LMNB1-204ENST00000463908 CALML3P27482 149 aa21.86■■□□□ 1.09
LMNB1-204ENST00000463908 CYP2C19P33261 490 aa21.86■■□□□ 1.09
LMNB1-204ENST00000463908 HSD17B4P51659 736 aa21.86■■□□□ 1.09
LMNB1-204ENST00000463908 MAMDC4Q6UXC1 1216 aa21.86■■□□□ 1.09
LMNB1-204ENST00000463908 HEATR3Q7Z4Q2 680 aa21.86■■□□□ 1.09
LMNB1-204ENST00000463908 SYTL5Q8TDW5 730 aaPredicted RBP21.86■■□□□ 1.09
LMNB1-204ENST00000463908 GTF3C6Q969F1 213 aa21.86■■□□□ 1.09
LMNB1-204ENST00000463908 RNF26Q9BY78 433 aaPredicted RBP21.86■■□□□ 1.09
LMNB1-204ENST00000463908 CPLX1O14810 134 aa21.85■■□□□ 1.09
LMNB1-204ENST00000463908 CFBP00751 764 aa21.85■■□□□ 1.09
LMNB1-204ENST00000463908 CACNB2Q08289 660 aaPredicted RBP21.85■■□□□ 1.09
LMNB1-204ENST00000463908 MTFR1Q15390 333 aa21.85■■□□□ 1.09
LMNB1-204ENST00000463908 MAP3K21Q5TCX8 1036 aa21.85■■□□□ 1.09
LMNB1-204ENST00000463908 ZNF467Q7Z7K2 595 aaPredicted RBP21.85■■□□□ 1.09
LMNB1-204ENST00000463908 IL27Q8NEV9 243 aa21.85■■□□□ 1.09
LMNB1-204ENST00000463908 TAAR1Q96RJ0 339 aa21.85■■□□□ 1.09
LMNB1-204ENST00000463908 TINF2Q9BSI4 451 aa21.85■■□□□ 1.09
LMNB1-204ENST00000463908 BIN2Q9UBW5 565 aaPredicted RBP21.85■■□□□ 1.09
LMNB1-204ENST00000463908 DDX49Q9Y6V7 483 aaKnown RBP21.85■■□□□ 1.09
LMNB1-204ENST00000463908 STXBP3O00186 592 aa21.84■■□□□ 1.09
LMNB1-204ENST00000463908 SNAI1O95863 264 aaPredicted RBP21.84■■□□□ 1.09
LMNB1-204ENST00000463908 MYCP01106 439 aaPredicted RBP21.84■■□□□ 1.09
LMNB1-204ENST00000463908 SCG2P13521 617 aa21.84■■□□□ 1.09
LMNB1-204ENST00000463908 SSRP1Q08945 709 aaKnown RBP21.84■■□□□ 1.09
LMNB1-204ENST00000463908 PRAMEF19Q5SWL8 479 aa21.84■■□□□ 1.09
LMNB1-204ENST00000463908 SHISA4Q96DD7 197 aa21.84■■□□□ 1.09
LMNB1-204ENST00000463908 ZSCAN31Q96LW9 406 aaPredicted RBP21.84■■□□□ 1.09
LMNB1-204ENST00000463908 MYH6P13533 1939 aa21.84■■□□□ 1.09
LMNB1-204ENST00000463908 MEIS2O14770 477 aa21.83■■□□□ 1.09
LMNB1-204ENST00000463908 ST18O60284 1047 aa21.83■■□□□ 1.09
LMNB1-204ENST00000463908 HOXA13P31271 388 aaPredicted RBP21.83■■□□□ 1.09
LMNB1-204ENST00000463908 MFSD14CQ5VZR4 134 aa21.83■■□□□ 1.09
LMNB1-204ENST00000463908 SAMD3Q8N6K7 520 aa21.83■■□□□ 1.09
LMNB1-204ENST00000463908 TRPV1Q8NER1 839 aa21.83■■□□□ 1.09
LMNB1-204ENST00000463908 BARHL2Q9NY43 387 aa21.83■■□□□ 1.09
LMNB1-204ENST00000463908 MAP3K20Q9NYL2 800 aaKnown RBP21.83■■□□□ 1.09
LMNB1-204ENST00000463908 GCOM1H8Y6P7 765 aaPredicted RBP21.82■■□□□ 1.08
LMNB1-204ENST00000463908 POLR2MP0CAP2 368 aa21.82■■□□□ 1.08
LMNB1-204ENST00000463908 PRKAR2AP13861 404 aaKnown RBP21.82■■□□□ 1.08
LMNB1-204ENST00000463908 FDPSP14324 419 aaKnown RBP21.82■■□□□ 1.08
LMNB1-204ENST00000463908 AKAP17AQ02040 695 aaKnown RBP21.82■■□□□ 1.08
LMNB1-204ENST00000463908 CPLX2Q6PUV4 134 aaKnown RBP21.82■■□□□ 1.08
LMNB1-204ENST00000463908 USP17L6PQ6QN14 398 aa21.82■■□□□ 1.08
LMNB1-204ENST00000463908 MSL3Q8N5Y2 521 aaKnown RBP21.82■■□□□ 1.08
LMNB1-204ENST00000463908 UNC93B1Q9H1C4 597 aa21.82■■□□□ 1.08
LMNB1-204ENST00000463908 PSTPIP2Q9H939 334 aa21.82■■□□□ 1.08
LMNB1-204ENST00000463908 RBM27Q9P2N5 1060 aaKnown RBP21.82■■□□□ 1.08
LMNB1-204ENST00000463908 CCL5P13501 91 aa21.81■■□□□ 1.08
LMNB1-204ENST00000463908 ALDH5A1P51649 535 aaPredicted RBP21.81■■□□□ 1.08
LMNB1-204ENST00000463908 UBXN2AP68543 259 aa21.81■■□□□ 1.08
LMNB1-204ENST00000463908 TRIM22Q8IYM9 498 aa21.81■■□□□ 1.08
LMNB1-204ENST00000463908 NSUN7Q8NE18 718 aaKnown RBP21.81■■□□□ 1.08
LMNB1-204ENST00000463908 MORC4Q8TE76 937 aa21.81■■□□□ 1.08
LMNB1-204ENST00000463908 AIFM3Q96NN9 605 aa21.81■■□□□ 1.08
LMNB1-204ENST00000463908 RPTORQ8N122 1335 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 SYNGAP1Q96PV0 1343 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 LCTP09848 1927 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 PLXNA1Q9UIW2 1896 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 SMCO2A6NFE2 343 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 hCG_1984214I3L0E3 225 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 PIK3CDO00329 1044 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 ADAMTS3O15072 1205 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 CCND3P30281 292 aaPredicted RBP21.8■■□□□ 1.08
LMNB1-204ENST00000463908 NAPAP54920 295 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 ARMCX2Q7L311 632 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 CCDC83Q8IWF9 413 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 ZNF713Q8N859 430 aaPredicted RBP21.8■■□□□ 1.08
LMNB1-204ENST00000463908 DNERQ8NFT8 737 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 KATNBL1Q9H079 304 aa21.8■■□□□ 1.08
LMNB1-204ENST00000463908 SH2B1Q9NRF2 756 aaPredicted RBP21.8■■□□□ 1.08
LMNB1-204ENST00000463908 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.8■■□□□ 1.08
LMNB1-204ENST00000463908 ADD3Q9UEY8 706 aaKnown RBP21.8■■□□□ 1.08
LMNB1-204ENST00000463908 ASB14A6NK59 587 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 JAK2O60674 1132 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 CDKL5O76039 1030 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 DEXIO95424 95 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 ZNF865P0CJ78 1059 aaPredicted RBP21.79■■□□□ 1.08
LMNB1-204ENST00000463908 CYBAP13498 195 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 PPP1R18Q6NYC8 613 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 FCHSD1Q86WN1 690 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 TMX3Q96JJ7 454 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 RMDN3Q96TC7 470 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 RIC8AQ9NPQ8 531 aa21.79■■□□□ 1.08
LMNB1-204ENST00000463908 EDNRBP24530 442 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms