RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TMF1P82094 1093 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 SFSWAPQ12872 951 aaKnown RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 MYBPC3Q14896 1274 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 LRIT3Q3SXY7 679 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 SPECC1Q5M775 1068 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 SARM1Q6SZW1 724 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 SEPT14Q6ZU15 432 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC121Q6ZUS5 278 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 MAEAQ7L5Y9 396 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 DZIP1Q86YF9 867 aaKnown RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC83Q8IWF9 413 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 GSPT2Q8IYD1 628 aaKnown RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 FUKQ8N0W3 1084 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 SMARCC2Q8TAQ2 1214 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC47Q96A33 483 aaKnown RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 HOOK2Q96ED9 719 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 DHRS1Q96LJ7 313 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 MPHOSPH8Q99549 860 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 NUP58Q9BVL2 599 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 UBE2OQ9C0C9 1292 aaKnown RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 L3MBTL1Q9Y468 752 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 RTL1A6NKG5 1358 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 VWA3AA6NCI4 1184 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 B4DLN1 442 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 H7C1W4 665 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 LSM1O15116 133 aaKnown RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ZBTB24O43167 697 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PRPF6O94906 941 aaKnown RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ANP32DO95626 131 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 A1BGP04217 495 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 CLTAP09496 248 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 DESP17661 470 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 HSPA4P34932 840 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PPFIA1Q13136 1202 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 STIM1Q13586 685 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ME3Q16798 604 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 C4orf48Q5BLP8 95 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 TSHZ3Q63HK5 1081 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 MSL1Q68DK7 614 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 SRGAP1Q7Z6B7 1085 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 TTC30AQ86WT1 665 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 SDR16C5Q8N3Y7 309 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PDILTQ8N807 584 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 HNRNPLLQ8WVV9 542 aaKnown RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 TEKT4Q8WW24 435 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ATRIPQ8WXE1 791 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 BAP1Q92560 729 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 TAF4BQ92750 862 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 SPATA32Q96LK8 384 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 DESI2Q9BSY9 194 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 OSBPL1AQ9BXW6 950 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 BRD8Q9H0E9 1235 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 CLSTN2Q9H4D0 955 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PRM3Q9NNZ6 103 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 LZTFL1Q9NQ48 299 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PRDM11Q9NQV5 511 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 DDX19AQ9NUU7 478 aaKnown RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ANO10Q9NW15 660 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 HYPKQ9NX55 129 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 TOR4AQ9NXH8 423 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 GALNT8Q9NY28 637 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 LNPEPQ9UIQ6 1025 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 CORO1CQ9ULV4 474 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ITM2BQ9Y287 266 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 KAT6BQ8WYB5 2073 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 EVC2Q86UK5 1308 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 NDUFB5O43674 189 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 DIAPH2O60879 1101 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 SHOX2O60902 331 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PFDN1O60925 122 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 GJB2P29033 226 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 CLCN2P51788 898 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PRMT2P55345 433 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PTK2Q05397 1052 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ADCY1Q08828 1119 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 WHAMMP3Q1A5X7 153 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 TCERG1LQ5VWI1 586 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 C9orf131Q5VYM1 1079 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 SYNE3Q6ZMZ3 975 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 NANOGNBQ7Z5D8 188 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 MARCH10Q8NA82 808 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 GGNBP2Q9H3C7 697 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PREBQ9HCU5 417 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 HELLSQ9NRZ9 838 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 KCND1Q9NSA2 647 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 RABL2AQ9UBK7 228 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 CDV3Q9UKY7 258 aaKnown RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 FRMD4BQ9Y2L6 1034 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PPP2R2CQ9Y2T4 447 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 C2CD2Q9Y426 696 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PALLDQ8WX93 1383 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 GRIN2DO15399 1336 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 CUTAO60888 179 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 E2F6O75461 281 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ALOX15P16050 662 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 VCAM1P19320 739 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ABL2P42684 1182 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 IGBP1P78318 339 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 FMR1Q06787 632 aaKnown RBP eCLIP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms