RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 B4GALT4O60513 344 aa27.34■■□□□ 1.97
SSNA1-203ENST00000463511 CCL23P55773 120 aa27.34■■□□□ 1.97
SSNA1-203ENST00000463511 RRP12Q5JTH9 1297 aaKnown RBP27.34■■□□□ 1.97
SSNA1-203ENST00000463511 NOC4LQ9BVI4 516 aaKnown RBP27.34■■□□□ 1.97
SSNA1-203ENST00000463511 Q9Y3F1 56 aa27.34■■□□□ 1.97
SSNA1-203ENST00000463511 FRMPD2Q68DX3 1309 aaPredicted RBP27.34■■□□□ 1.97
SSNA1-203ENST00000463511 CHD7Q9P2D1 2997 aa27.33■■□□□ 1.97
SSNA1-203ENST00000463511 NFIBO00712 420 aa27.33■■□□□ 1.97
SSNA1-203ENST00000463511 FGRP09769 529 aa27.33■■□□□ 1.97
SSNA1-203ENST00000463511 BAATQ14032 418 aaPredicted RBP27.33■■□□□ 1.97
SSNA1-203ENST00000463511 SYDE2Q5VT97 1194 aa27.33■■□□□ 1.97
SSNA1-203ENST00000463511 MORC4Q8TE76 937 aa27.33■■□□□ 1.97
SSNA1-203ENST00000463511 SYMPKQ92797 1274 aaKnown RBP27.33■■□□□ 1.97
SSNA1-203ENST00000463511 MTIF3Q9H2K0 278 aaKnown RBP27.33■■□□□ 1.97
SSNA1-203ENST00000463511 MYH6P13533 1939 aa27.33■■□□□ 1.97
SSNA1-203ENST00000463511 SCN10AQ9Y5Y9 1956 aa27.33■■□□□ 1.97
SSNA1-203ENST00000463511 LAMA4Q16363 1823 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 TANC1Q9C0D5 1861 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 FGBP02675 491 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 ALDH5A1P51649 535 aaPredicted RBP27.32■■□□□ 1.96
SSNA1-203ENST00000463511 PDE1AP54750 535 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 ALX1Q15699 326 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 BTNL9Q6UXG8 535 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 OTOP2Q7RTS6 562 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 PPM1EQ8WY54 764 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 FAM227BQ96M60 508 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 TMEM47Q9BQJ4 181 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 WNT8AQ9H1J5 351 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 GPCPD1Q9NPB8 672 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 PRDM6Q9NQX0 595 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 HELLSQ9NRZ9 838 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 ADD3Q9UEY8 706 aaKnown RBP27.32■■□□□ 1.96
SSNA1-203ENST00000463511 MSRAQ9UJ68 235 aa27.32■■□□□ 1.96
SSNA1-203ENST00000463511 A0A0D9SFI3 127 aa27.31■■□□□ 1.96
SSNA1-203ENST00000463511 PTPDC1A2A3K4 754 aa27.31■■□□□ 1.96
SSNA1-203ENST00000463511 TOP1P11387 765 aaKnown RBP27.31■■□□□ 1.96
SSNA1-203ENST00000463511 PDE4AP27815 886 aa27.31■■□□□ 1.96
SSNA1-203ENST00000463511 RAB30Q15771 203 aa27.31■■□□□ 1.96
SSNA1-203ENST00000463511 DUSP28Q4G0W2 176 aa27.31■■□□□ 1.96
SSNA1-203ENST00000463511 PLEKHM2Q8IWE5 1019 aa27.31■■□□□ 1.96
SSNA1-203ENST00000463511 SEZ6LQ9BYH1 1024 aa27.31■■□□□ 1.96
SSNA1-203ENST00000463511 FGAP02671 866 aa27.3■■□□□ 1.96
SSNA1-203ENST00000463511 TJAP1Q5JTD0 557 aa27.3■■□□□ 1.96
SSNA1-203ENST00000463511 SLC30A10Q6XR72 485 aa27.3■■□□□ 1.96
SSNA1-203ENST00000463511 NKX2-4Q9H2Z4 354 aa27.3■■□□□ 1.96
SSNA1-203ENST00000463511 WDR11Q9BZH6 1224 aa27.29■■□□□ 1.96
SSNA1-203ENST00000463511 ALDH8A1Q9H2A2 487 aaPredicted RBP27.29■■□□□ 1.96
SSNA1-203ENST00000463511 YBX2Q9Y2T7 364 aaKnown RBP27.29■■□□□ 1.96
SSNA1-203ENST00000463511 PDHBP11177 359 aa27.28■■□□□ 1.96
SSNA1-203ENST00000463511 CALML3P27482 149 aa27.28■■□□□ 1.96
SSNA1-203ENST00000463511 HAND2P61296 217 aa27.28■■□□□ 1.96
SSNA1-203ENST00000463511 SCLYQ96I15 445 aa27.28■■□□□ 1.96
SSNA1-203ENST00000463511 REV3LO60673 3130 aa27.28■■□□□ 1.96
SSNA1-203ENST00000463511 ADGRE1Q14246 886 aa27.27■■□□□ 1.96
SSNA1-203ENST00000463511 MCMDC2Q4G0Z9 681 aa27.27■■□□□ 1.96
SSNA1-203ENST00000463511 AKNAD1Q5T1N1 836 aa27.27■■□□□ 1.96
SSNA1-203ENST00000463511 ZNF589Q86UQ0 364 aaPredicted RBP27.27■■□□□ 1.96
SSNA1-203ENST00000463511 CLEC4DQ8WXI8 215 aa27.27■■□□□ 1.96
SSNA1-203ENST00000463511 OSBPL3Q9H4L5 887 aa27.27■■□□□ 1.96
SSNA1-203ENST00000463511 SLC28A3Q9HAS3 691 aa27.27■■□□□ 1.96
SSNA1-203ENST00000463511 TCP11L1Q9NUJ3 509 aa27.27■■□□□ 1.96
SSNA1-203ENST00000463511 TRMT13Q9NUP7 481 aaKnown RBP27.27■■□□□ 1.96
SSNA1-203ENST00000463511 POLR3EQ9NVU0 708 aa27.27■■□□□ 1.96
SSNA1-203ENST00000463511 KIAA1217Q5T5P2 1943 aa27.27■■□□□ 1.96
SSNA1-203ENST00000463511 TRIP12Q14669 1992 aaPredicted RBP27.26■■□□□ 1.95
SSNA1-203ENST00000463511 ZMYM6O95789 1325 aa27.26■■□□□ 1.95
SSNA1-203ENST00000463511 LOC102724159A0A0B4J2E5 919 aa27.26■■□□□ 1.95
SSNA1-203ENST00000463511 MYL3P08590 195 aa27.26■■□□□ 1.95
SSNA1-203ENST00000463511 HSPD1P10809 573 aaKnown RBP27.26■■□□□ 1.95
SSNA1-203ENST00000463511 PURAQ00577 322 aaKnown RBP27.26■■□□□ 1.95
SSNA1-203ENST00000463511 PWP2Q15269 919 aaKnown RBP27.26■■□□□ 1.95
SSNA1-203ENST00000463511 TNKSO95271 1327 aa27.25■■□□□ 1.95
SSNA1-203ENST00000463511 CYP2C9P11712 490 aa27.25■■□□□ 1.95
SSNA1-203ENST00000463511 IGFBP4P22692 258 aa27.25■■□□□ 1.95
SSNA1-203ENST00000463511 CPT1AP50416 773 aa27.25■■□□□ 1.95
SSNA1-203ENST00000463511 RABGGTBP53611 331 aa27.25■■□□□ 1.95
SSNA1-203ENST00000463511 NMIQ13287 307 aaPredicted RBP27.25■■□□□ 1.95
SSNA1-203ENST00000463511 CCDC85BQ15834 202 aaPredicted RBP27.25■■□□□ 1.95
SSNA1-203ENST00000463511 RNF207Q6ZRF8 634 aa27.25■■□□□ 1.95
SSNA1-203ENST00000463511 RPUSD2Q8IZ73 545 aaKnown RBP27.25■■□□□ 1.95
SSNA1-203ENST00000463511 OR6J1Q8NGC5 347 aa27.25■■□□□ 1.95
SSNA1-203ENST00000463511 VWCEQ96DN2 955 aa27.25■■□□□ 1.95
SSNA1-203ENST00000463511 SLC4A7Q9Y6M7 1214 aa27.25■■□□□ 1.95
SSNA1-203ENST00000463511 RBM47A0AV96 593 aaKnown RBP27.24■■□□□ 1.95
SSNA1-203ENST00000463511 ZBBXA8MT70 800 aa27.24■■□□□ 1.95
SSNA1-203ENST00000463511 PDE4DQ08499 809 aa27.24■■□□□ 1.95
SSNA1-203ENST00000463511 ZNF543Q08ER8 600 aa27.24■■□□□ 1.95
SSNA1-203ENST00000463511 PPP2R5BQ15173 497 aa27.23■■□□□ 1.95
SSNA1-203ENST00000463511 MTG1Q9BT17 334 aaPredicted RBP27.23■■□□□ 1.95
SSNA1-203ENST00000463511 CCDC171Q6TFL3 1326 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 PTPRSQ13332 1948 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 SUPT20HL2P0C7V6 817 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 MYOGP15173 224 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 RPS6P62753 249 aaKnown RBP27.22■■□□□ 1.95
SSNA1-203ENST00000463511 FAM47CQ5HY64 1035 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 PPP2R2DQ66LE6 453 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 MFSD6Q6ZSS7 791 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 TBC1D10CQ8IV04 446 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 PPP1R13LQ8WUF5 828 aa27.22■■□□□ 1.95
SSNA1-203ENST00000463511 GPHNQ9NQX3 736 aaPredicted RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms