RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 CDC27P30260 824 aa20.52■□□□□ 0.88
VPS52-214ENST00000463486 ARMCX2Q7L311 632 aa20.52■□□□□ 0.88
VPS52-214ENST00000463486 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.52■□□□□ 0.88
VPS52-214ENST00000463486 MRPL11Q9Y3B7 192 aaKnown RBP20.52■□□□□ 0.88
VPS52-214ENST00000463486 CYP46A1Q9Y6A2 500 aa20.52■□□□□ 0.88
VPS52-214ENST00000463486 MYH6P13533 1939 aa20.52■□□□□ 0.88
VPS52-214ENST00000463486 PTPDC1A2A3K4 754 aa20.51■□□□□ 0.87
VPS52-214ENST00000463486 SYNE3Q6ZMZ3 975 aa20.51■□□□□ 0.87
VPS52-214ENST00000463486 SYTL5Q8TDW5 730 aaPredicted RBP20.51■□□□□ 0.87
VPS52-214ENST00000463486 GTF3C3Q9Y5Q9 886 aa20.51■□□□□ 0.87
VPS52-214ENST00000463486 MCM3APO60318 1980 aa20.51■□□□□ 0.87
VPS52-214ENST00000463486 EDNRBP24530 442 aa20.5■□□□□ 0.87
VPS52-214ENST00000463486 CALML3P27482 149 aa20.5■□□□□ 0.87
VPS52-214ENST00000463486 ADD1P35611 737 aaKnown RBP20.5■□□□□ 0.87
VPS52-214ENST00000463486 HSD17B4P51659 736 aa20.5■□□□□ 0.87
VPS52-214ENST00000463486 ACVR2BQ13705 512 aa20.5■□□□□ 0.87
VPS52-214ENST00000463486 RTN1Q16799 776 aa20.5■□□□□ 0.87
VPS52-214ENST00000463486 PIBF1Q8WXW3 757 aa20.5■□□□□ 0.87
VPS52-214ENST00000463486 RBM28Q9NW13 759 aaKnown RBP20.5■□□□□ 0.87
VPS52-214ENST00000463486 PDE4DIPQ5VU43 2346 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 hCG_1642624A0A1W2PR95 340 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 ASB14A6NK59 587 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 ADCY6O43306 1168 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 EIF5BO60841 1220 aaKnown RBP20.49■□□□□ 0.87
VPS52-214ENST00000463486 CNGA1P29973 690 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 PDIA3P30101 505 aaKnown RBP20.49■□□□□ 0.87
VPS52-214ENST00000463486 ALDH5A1P51649 535 aaPredicted RBP20.49■□□□□ 0.87
VPS52-214ENST00000463486 MLLT1Q03111 559 aaPredicted RBP20.49■□□□□ 0.87
VPS52-214ENST00000463486 MCF2L2Q86YR7 1114 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 CCDC82Q8N4S0 544 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 RRP36Q96EU6 259 aaKnown RBP20.49■□□□□ 0.87
VPS52-214ENST00000463486 ALDH8A1Q9H2A2 487 aaPredicted RBP20.49■□□□□ 0.87
VPS52-214ENST00000463486 ABHD16BQ9H3Z7 469 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 CNPY2Q9Y2B0 182 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 CNTNAP5Q8WYK1 1306 aa20.49■□□□□ 0.87
VPS52-214ENST00000463486 LOC102724159A0A0B4J2E5 919 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 GOLGA8AA7E2F4 631 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 GOLGA8BA8MQT2 603 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 MSCO60682 206 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 FGD1P98174 961 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 PPP2R5BQ15173 497 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 PWP2Q15269 919 aaKnown RBP20.48■□□□□ 0.87
VPS52-214ENST00000463486 ANKLE1Q8NAG6 615 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 DNERQ8NFT8 737 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 DIS3LQ8TF46 1054 aaKnown RBP20.48■□□□□ 0.87
VPS52-214ENST00000463486 TAAR1Q96RJ0 339 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 FRMPD3Q5JV73 1810 aa20.48■□□□□ 0.87
VPS52-214ENST00000463486 TRAF1Q13077 416 aa20.47■□□□□ 0.87
VPS52-214ENST00000463486 NTRK3Q16288 839 aa20.47■□□□□ 0.87
VPS52-214ENST00000463486 ANO1Q5XXA6 986 aa20.47■□□□□ 0.87
VPS52-214ENST00000463486 TAPT1Q6NXT6 567 aa20.47■□□□□ 0.87
VPS52-214ENST00000463486 PDRG1Q9NUG6 133 aa20.47■□□□□ 0.87
VPS52-214ENST00000463486 ADD3Q9UEY8 706 aaKnown RBP20.47■□□□□ 0.87
VPS52-214ENST00000463486 FARP2O94887 1054 aaPredicted RBP20.46■□□□□ 0.87
VPS52-214ENST00000463486 CFBP00751 764 aa20.46■□□□□ 0.87
VPS52-214ENST00000463486 COL6A1P12109 1028 aa20.46■□□□□ 0.87
VPS52-214ENST00000463486 METAP2P50579 478 aaKnown RBP eCLIP20.46■□□□□ 0.87
VPS52-214ENST00000463486 CCDC144BQ3MJ40 725 aa20.46■□□□□ 0.87
VPS52-214ENST00000463486 SAMD3Q8N6K7 520 aa20.46■□□□□ 0.87
VPS52-214ENST00000463486 LENG1Q96BZ8 264 aaPredicted RBP20.46■□□□□ 0.87
VPS52-214ENST00000463486 PAWRQ96IZ0 340 aaKnown RBP20.46■□□□□ 0.87
VPS52-214ENST00000463486 LARP6Q9BRS8 491 aaKnown RBP20.46■□□□□ 0.87
VPS52-214ENST00000463486 MAP3K20Q9NYL2 800 aaKnown RBP20.46■□□□□ 0.87
VPS52-214ENST00000463486 LRRC37A2A6NM11 1700 aa20.46■□□□□ 0.87
VPS52-214ENST00000463486 DNAH12Q6ZR08 3092 aa20.46■□□□□ 0.87
VPS52-214ENST00000463486 AKR1A1P14550 325 aa20.45■□□□□ 0.86
VPS52-214ENST00000463486 HOXA13P31271 388 aaPredicted RBP20.45■□□□□ 0.86
VPS52-214ENST00000463486 TMEM63BQ5T3F8 832 aa20.45■□□□□ 0.86
VPS52-214ENST00000463486 TYW1BQ6NUM6 668 aa20.45■□□□□ 0.86
VPS52-214ENST00000463486 ZNF274Q96GC6 653 aaPredicted RBP20.45■□□□□ 0.86
VPS52-214ENST00000463486 KIF2CQ99661 725 aa20.45■□□□□ 0.86
VPS52-214ENST00000463486 PDGFCQ9NRA1 345 aa20.45■□□□□ 0.86
VPS52-214ENST00000463486 ZHX1Q9UKY1 873 aaPredicted RBP20.45■□□□□ 0.86
VPS52-214ENST00000463486 FAM184BQ9ULE4 1060 aa20.45■□□□□ 0.86
VPS52-214ENST00000463486 V9GY48 417 aaPredicted RBP20.45■□□□□ 0.86
VPS52-214ENST00000463486 RBM47A0AV96 593 aaKnown RBP20.44■□□□□ 0.86
VPS52-214ENST00000463486 FBXO16Q8IX29 292 aaPredicted RBP20.44■□□□□ 0.86
VPS52-214ENST00000463486 NCOA5Q9HCD5 579 aaKnown RBP20.44■□□□□ 0.86
VPS52-214ENST00000463486 SEC63Q9UGP8 760 aaKnown RBP20.44■□□□□ 0.86
VPS52-214ENST00000463486 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.43■□□□□ 0.86
VPS52-214ENST00000463486 MEIS2O14770 477 aa20.43■□□□□ 0.86
VPS52-214ENST00000463486 ADAMTS4O75173 837 aa20.43■□□□□ 0.86
VPS52-214ENST00000463486 WWC2Q6AWC2 1192 aa20.43■□□□□ 0.86
VPS52-214ENST00000463486 EEPD1Q7L9B9 569 aa20.43■□□□□ 0.86
VPS52-214ENST00000463486 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
VPS52-214ENST00000463486 VTA1Q9NP79 307 aa20.43■□□□□ 0.86
VPS52-214ENST00000463486 NAP1L2Q9ULW6 460 aaPredicted RBP20.43■□□□□ 0.86
VPS52-214ENST00000463486 GNEQ9Y223 722 aaKnown RBP20.43■□□□□ 0.86
VPS52-214ENST00000463486 CEP290O15078 2479 aa20.43■□□□□ 0.86
VPS52-214ENST00000463486 CCDC196A0A1B0GTZ2 297 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 GCOM1H8Y6P7 765 aaPredicted RBP20.42■□□□□ 0.86
VPS52-214ENST00000463486 PIK3CDO00329 1044 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 CTAGE5O15320 804 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 DUSP11O75319 330 aaKnown RBP20.42■□□□□ 0.86
VPS52-214ENST00000463486 POLR2MP0CAP2 368 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 RARBP10826 455 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 PTGS1P23219 599 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 ADCYAP1R1P41586 468 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 NKX3-2P78367 333 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 CCT2P78371 535 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms