RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 USH1GQ495M9 461 aa28.24■■■□□ 2.11
TTC3-212ENST00000463216 WDR11Q9BZH6 1224 aa28.24■■■□□ 2.11
TTC3-212ENST00000463216 UBA5Q9GZZ9 404 aa28.24■■■□□ 2.11
TTC3-212ENST00000463216 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.23■■■□□ 2.11
TTC3-212ENST00000463216 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.23■■■□□ 2.11
TTC3-212ENST00000463216 KDM4AO75164 1064 aa28.23■■■□□ 2.11
TTC3-212ENST00000463216 IQCA1Q86XH1 822 aa28.23■■■□□ 2.11
TTC3-212ENST00000463216 MORC4Q8TE76 937 aa28.23■■■□□ 2.11
TTC3-212ENST00000463216 CLEC4DQ8WXI8 215 aa28.23■■■□□ 2.11
TTC3-212ENST00000463216 CPVLQ9H3G5 476 aa28.23■■■□□ 2.11
TTC3-212ENST00000463216 Q9Y3F1 56 aa28.23■■■□□ 2.11
TTC3-212ENST00000463216 CD4P01730 458 aa28.22■■■□□ 2.11
TTC3-212ENST00000463216 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.22■■■□□ 2.113e-6■■■■■ 28.8
TTC3-212ENST00000463216 KAT14Q9H8E8 782 aa28.22■■■□□ 2.11
TTC3-212ENST00000463216 PNMA2Q9UL42 364 aa28.22■■■□□ 2.11
TTC3-212ENST00000463216 HIP1O00291 1037 aa28.21■■■□□ 2.11
TTC3-212ENST00000463216 SNHG28P0DPA3 235 aa28.21■■■□□ 2.11
TTC3-212ENST00000463216 PDE4DQ08499 809 aa28.21■■■□□ 2.11
TTC3-212ENST00000463216 DUSP28Q4G0W2 176 aa28.21■■■□□ 2.11
TTC3-212ENST00000463216 TMEM240Q5SV17 173 aa28.21■■■□□ 2.11
TTC3-212ENST00000463216 GPATCH4Q5T3I0 446 aaKnown RBP28.21■■■□□ 2.11
TTC3-212ENST00000463216 DGKHQ86XP1 1220 aa28.21■■■□□ 2.11
TTC3-212ENST00000463216 MAFAQ8NHW3 353 aaPredicted RBP28.21■■■□□ 2.11
TTC3-212ENST00000463216 HIPK3Q9H422 1215 aa28.21■■■□□ 2.11
TTC3-212ENST00000463216 B4E1Z4 1266 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 FOSL2P15408 326 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 DNAJB2P25686 324 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 RPS6P62753 249 aaKnown RBP28.2■■■□□ 2.1
TTC3-212ENST00000463216 ZNF365Q70YC5 407 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 C16orf59Q7L2K0 433 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 SLC43A3Q8NBI5 491 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 PNMA1Q8ND90 353 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 OR6J1Q8NGC5 347 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 MPHOSPH6Q99547 160 aaKnown RBP28.2■■■□□ 2.1
TTC3-212ENST00000463216 TRPV6Q9H1D0 765 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 LAMA4Q16363 1823 aa28.2■■■□□ 2.1
TTC3-212ENST00000463216 GRIN2DO15399 1336 aa28.19■■■□□ 2.1
TTC3-212ENST00000463216 UNC80Q8N2C7 3258 aa28.19■■■□□ 2.1
TTC3-212ENST00000463216 MYL3P08590 195 aa28.19■■■□□ 2.1
TTC3-212ENST00000463216 IMMTQ16891 758 aaKnown RBP28.19■■■□□ 2.1
TTC3-212ENST00000463216 CCDC178Q5BJE1 867 aa28.19■■■□□ 2.1
TTC3-212ENST00000463216 UMODL1Q5DID0 1318 aa28.18■■■□□ 2.1
TTC3-212ENST00000463216 WDR19Q8NEZ3 1342 aa28.18■■■□□ 2.1
TTC3-212ENST00000463216 DHX16O60231 1041 aaKnown RBP28.18■■■□□ 2.1
TTC3-212ENST00000463216 B4GALT4O60513 344 aa28.18■■■□□ 2.1
TTC3-212ENST00000463216 CCL23P55773 120 aa28.18■■■□□ 2.1
TTC3-212ENST00000463216 PSRC1Q6PGN9 363 aaPredicted RBP28.18■■■□□ 2.1
TTC3-212ENST00000463216 GPHNQ9NQX3 736 aaPredicted RBP28.18■■■□□ 2.1
TTC3-212ENST00000463216 CDH23Q9H251 3354 aa28.17■■■□□ 2.1
TTC3-212ENST00000463216 GRXCR1A8MXD5 290 aa28.17■■■□□ 2.1
TTC3-212ENST00000463216 TIFAQ96CG3 184 aa28.17■■■□□ 2.1
TTC3-212ENST00000463216 ZSCAN10Q96SZ4 725 aaPredicted RBP28.17■■■□□ 2.1
TTC3-212ENST00000463216 DSCC1Q9BVC3 393 aa28.17■■■□□ 2.1
TTC3-212ENST00000463216 TMEM265A0A087WTH1 108 aa28.16■■■□□ 2.1
TTC3-212ENST00000463216 LOC102724159A0A0B4J2E5 919 aa28.16■■■□□ 2.1
TTC3-212ENST00000463216 CPT1AP50416 773 aa28.16■■■□□ 2.1
TTC3-212ENST00000463216 PPP2R5BQ15173 497 aa28.16■■■□□ 2.1
TTC3-212ENST00000463216 PWP2Q15269 919 aaKnown RBP28.16■■■□□ 2.1
TTC3-212ENST00000463216 CDC37Q16543 378 aaPredicted RBP28.16■■■□□ 2.1
TTC3-212ENST00000463216 IL23AQ9NPF7 189 aa28.16■■■□□ 2.1
TTC3-212ENST00000463216 POLR3EQ9NVU0 708 aa28.16■■■□□ 2.1
TTC3-212ENST00000463216 CTNNA3Q9UI47 895 aa28.16■■■□□ 2.1
TTC3-212ENST00000463216 EYSQ5T1H1 3165 aa28.16■■■□□ 2.1
TTC3-212ENST00000463216 B4DLN1 442 aa28.15■■■□□ 2.1
TTC3-212ENST00000463216 MRPL12P52815 198 aaKnown RBP28.15■■■□□ 2.1
TTC3-212ENST00000463216 GRIN2CQ14957 1233 aa28.15■■■□□ 2.1
TTC3-212ENST00000463216 DNERQ8NFT8 737 aa28.15■■■□□ 2.1
TTC3-212ENST00000463216 SEZ6LQ9BYH1 1024 aa28.15■■■□□ 2.1
TTC3-212ENST00000463216 VAT1LQ9HCJ6 419 aa28.15■■■□□ 2.1
TTC3-212ENST00000463216 ZSWIM5Q9P217 1185 aa28.15■■■□□ 2.1
TTC3-212ENST00000463216 TNKSO95271 1327 aa28.15■■■□□ 2.1
TTC3-212ENST00000463216 RBM47A0AV96 593 aaKnown RBP28.14■■■□□ 2.1
TTC3-212ENST00000463216 PBX2P40425 430 aa28.14■■■□□ 2.1
TTC3-212ENST00000463216 BRDTQ58F21 947 aaPredicted RBP28.14■■■□□ 2.1
TTC3-212ENST00000463216 ADGRF4Q8IZF3 695 aa28.14■■■□□ 2.1
TTC3-212ENST00000463216 ENAHQ8N8S7 591 aaPredicted RBP28.14■■■□□ 2.1
TTC3-212ENST00000463216 COPS5Q92905 334 aa28.14■■■□□ 2.1
TTC3-212ENST00000463216 UBAC1Q9BSL1 405 aa28.14■■■□□ 2.1
TTC3-212ENST00000463216 KRT23Q9C075 422 aa28.14■■■□□ 2.1
TTC3-212ENST00000463216 ZNF576Q9H609 170 aa28.14■■■□□ 2.1
TTC3-212ENST00000463216 FGBP02675 491 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 TXNP10599 105 aaKnown RBP28.13■■■□□ 2.09
TTC3-212ENST00000463216 NT5C2P49902 561 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 CHMP4BP1P59074 171 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 PURAQ00577 322 aaKnown RBP28.13■■■□□ 2.09
TTC3-212ENST00000463216 FAM47CQ5HY64 1035 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 OTOP2Q7RTS6 562 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 SCFD2Q8WU76 684 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 PPP1R13LQ8WUF5 828 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 NOC4LQ9BVI4 516 aaKnown RBP28.13■■■□□ 2.09
TTC3-212ENST00000463216 PBX4Q9BYU1 374 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 ALDH8A1Q9H2A2 487 aaPredicted RBP28.13■■■□□ 2.09
TTC3-212ENST00000463216 TRMT13Q9NUP7 481 aaKnown RBP28.13■■■□□ 2.09
TTC3-212ENST00000463216 MYH6P13533 1939 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 RAD50Q92878 1312 aa28.13■■■□□ 2.09
TTC3-212ENST00000463216 PARP1P09874 1014 aaKnown RBP28.12■■■□□ 2.09
TTC3-212ENST00000463216 ASPRV1Q53RT3 343 aa28.12■■■□□ 2.09
TTC3-212ENST00000463216 TBC1D5Q92609 795 aa28.12■■■□□ 2.09
TTC3-212ENST00000463216 SCLYQ96I15 445 aa28.12■■■□□ 2.09
TTC3-212ENST00000463216 MTG1Q9BT17 334 aaPredicted RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms