RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ZBTB7AO95365 584 aa6.48□□□□□ -1.37
USH2A-203ENST00000463147 PLATP00750 562 aa6.48□□□□□ -1.37
USH2A-203ENST00000463147 MCM4P33991 863 aa6.48□□□□□ -1.37
USH2A-203ENST00000463147 HDLBPQ00341 1268 aaKnown RBP6.48□□□□□ -1.37
USH2A-203ENST00000463147 DLX2Q07687 328 aaPredicted RBP6.48□□□□□ -1.37
USH2A-203ENST00000463147 C9orf131Q5VYM1 1079 aa6.48□□□□□ -1.37
USH2A-203ENST00000463147 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
USH2A-203ENST00000463147 LOXL4Q96JB6 756 aa6.48□□□□□ -1.37
USH2A-203ENST00000463147 C8orf37Q96NL8 207 aa6.48□□□□□ -1.37
USH2A-203ENST00000463147 DUSP10Q9Y6W6 482 aa6.48□□□□□ -1.37
USH2A-203ENST00000463147 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
USH2A-203ENST00000463147 POU4F1Q01851 419 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 CLCQ05315 142 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 APOBRQ0VD83 1088 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 SEZ6Q53EL9 994 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 FAM124AQ86V42 546 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 NETO2Q8NC67 525 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 SLC16A11Q8NCK7 471 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 CHST13Q8NET6 341 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 PTCHD1Q96NR3 888 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 SORCS2Q96PQ0 1159 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 FHOD1Q9Y613 1164 aa6.47□□□□□ -1.37
USH2A-203ENST00000463147 FSHBP01225 129 aa6.46□□□□□ -1.38
USH2A-203ENST00000463147 IMPDH2P12268 514 aa6.46□□□□□ -1.38
USH2A-203ENST00000463147 ZNF20P17024 532 aa6.46□□□□□ -1.38
USH2A-203ENST00000463147 GDF5P43026 501 aa6.46□□□□□ -1.38
USH2A-203ENST00000463147 PMS1P54277 932 aaKnown RBP6.46□□□□□ -1.38
USH2A-203ENST00000463147 ZNF761Q86XN6 746 aaPredicted RBP6.46□□□□□ -1.38
USH2A-203ENST00000463147 SLC9A7Q96T83 725 aa6.46□□□□□ -1.38
USH2A-203ENST00000463147 HCFC2Q9Y5Z7 792 aa6.46□□□□□ -1.38
USH2A-203ENST00000463147 H0Y8X5 98 aa6.45□□□□□ -1.38
USH2A-203ENST00000463147 GLI4P10075 376 aa6.45□□□□□ -1.38
USH2A-203ENST00000463147 CACNB2Q08289 660 aaPredicted RBP6.45□□□□□ -1.38
USH2A-203ENST00000463147 NAALADL2Q58DX5 795 aa6.45□□□□□ -1.38
USH2A-203ENST00000463147 BORAQ6PGQ7 559 aa6.45□□□□□ -1.38
USH2A-203ENST00000463147 LGI4Q8N135 537 aa6.45□□□□□ -1.38
USH2A-203ENST00000463147 TAB3Q8N5C8 712 aaPredicted RBP6.45□□□□□ -1.38
USH2A-203ENST00000463147 DVL3Q92997 716 aaPredicted RBP6.45□□□□□ -1.38
USH2A-203ENST00000463147 NKD1Q969G9 470 aa6.45□□□□□ -1.38
USH2A-203ENST00000463147 A0A087WZG4 1122 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 SHOXO15266 292 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 PMLP29590 882 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 MC3RP41968 323 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 CRKP46108 304 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 HMGA2P52926 109 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 HS2ST1Q7LGA3 356 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 METTL16Q86W50 562 aaKnown RBP6.44□□□□□ -1.38
USH2A-203ENST00000463147 SLITRK4Q8IW52 837 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 SMARCC2Q8TAQ2 1214 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 C8orf49Q96NF6 230 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 NT5C1AQ9BXI3 368 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 BCL11AQ9H165 835 aa6.44□□□□□ -1.38
USH2A-203ENST00000463147 ITGA4P13612 1032 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 TACR1P25103 407 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 ZC3H6P61129 1189 aaKnown RBP6.43□□□□□ -1.38
USH2A-203ENST00000463147 SURF1Q15526 300 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 FAM26FQ5R3K3 315 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 EEF1DP3Q658K8 133 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 USP51Q70EK9 711 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 ADAMTS17Q8TE56 1095 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 SREK1Q8WXA9 508 aaKnown RBP6.43□□□□□ -1.38
USH2A-203ENST00000463147 RNF34Q969K3 372 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 ZBTB8AQ96BR9 441 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 DRC1Q96MC2 740 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 FCRL3Q96P31 734 aaPredicted RBP6.43□□□□□ -1.38
USH2A-203ENST00000463147 GP6Q9HCN6 339 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 COPRSQ9NQ92 184 aa6.43□□□□□ -1.38
USH2A-203ENST00000463147 DIS3Q9Y2L1 958 aaKnown RBP6.43□□□□□ -1.38
USH2A-203ENST00000463147 C9IYK1 514 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 CYR61O00622 381 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 SCAMP3O14828 347 aaKnown RBP6.42□□□□□ -1.38
USH2A-203ENST00000463147 ZNF445P59923 1031 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 TBC1D10BQ4KMP7 808 aaPredicted RBP6.42□□□□□ -1.38
USH2A-203ENST00000463147 RCSD1Q6JBY9 416 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 GLB1LQ6UWU2 654 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 FIBCD1Q8N539 461 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 LZTR1Q8N653 840 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 LINC00482Q8N8I6 264 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 CDK5RAP1Q96SZ6 601 aaKnown RBP6.42□□□□□ -1.38
USH2A-203ENST00000463147 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 SPATA6Q9NWH7 488 aaPredicted RBP6.42□□□□□ -1.38
USH2A-203ENST00000463147 UBP1Q9NZI7 540 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
USH2A-203ENST00000463147 CYP2C8P10632 490 aa6.41□□□□□ -1.38
USH2A-203ENST00000463147 CD247P20963 164 aa6.41□□□□□ -1.38
USH2A-203ENST00000463147 ERCC5P28715 1186 aaPredicted RBP6.41□□□□□ -1.38
USH2A-203ENST00000463147 TCEAL1Q15170 157 aa6.41□□□□□ -1.38
USH2A-203ENST00000463147 KISS1RQ969F8 398 aaPredicted RBP6.41□□□□□ -1.38
USH2A-203ENST00000463147 TM9SF2Q99805 663 aa6.41□□□□□ -1.38
USH2A-203ENST00000463147 GGT7Q9UJ14 662 aa6.41□□□□□ -1.38
USH2A-203ENST00000463147 TRBV23OR9-2A0A075B6M9 112 aa6.4□□□□□ -1.38
USH2A-203ENST00000463147 CD3EP07766 207 aa6.4□□□□□ -1.38
USH2A-203ENST00000463147 C6P13671 934 aa6.4□□□□□ -1.38
USH2A-203ENST00000463147 TACR2P21452 398 aa6.4□□□□□ -1.38
USH2A-203ENST00000463147 RPL13P26373 211 aaKnown RBP6.4□□□□□ -1.38
USH2A-203ENST00000463147 RGL3Q3MIN7 710 aa6.4□□□□□ -1.38
USH2A-203ENST00000463147 TMEM87AQ8NBN3 555 aa6.4□□□□□ -1.38
USH2A-203ENST00000463147 ADAMTS1Q9UHI8 967 aa6.4□□□□□ -1.38
USH2A-203ENST00000463147 MROH6A6NGR9 719 aa6.39□□□□□ -1.39
USH2A-203ENST00000463147 FANCCQ00597 558 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms