RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 RNF32Q9H0A6 362 aa4.11□□□□□ -1.75
CD46-210ENST00000462968 GCM1Q9NP62 436 aa4.11□□□□□ -1.75
CD46-210ENST00000462968 TMEM59LQ9UK28 342 aa4.11□□□□□ -1.75
CD46-210ENST00000462968 C4BP0C0L5 1744 aa4.11□□□□□ -1.75
CD46-210ENST00000462968 NFAT5O94916 1531 aa4.11□□□□□ -1.75
CD46-210ENST00000462968 C5P01031 1676 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 N4BP2Q86UW6 1770 aaPredicted RBP4.1□□□□□ -1.75
CD46-210ENST00000462968 KIF13BQ9NQT8 1826 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 POLRMTO00411 1230 aaKnown RBP4.1□□□□□ -1.75
CD46-210ENST00000462968 FANCGO15287 622 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 PSPNO60542 156 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 RPS6KA4O75676 772 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 LRIG2O94898 1065 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 NEFLP07196 543 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 CELA3BP08861 270 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 TM4SF1P30408 202 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 FGD1P98174 961 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 KRTAP1-1Q07627 177 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 DDR1Q08345 913 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 ORC1Q13415 861 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 GRM2Q14416 872 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 PKN2Q16513 984 aaKnown RBP4.1□□□□□ -1.75
CD46-210ENST00000462968 SFRP5Q5T4F7 317 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 CST9Q5W186 159 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 SAPCD2Q86UD0 394 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 RAPGEF4Q8WZA2 1011 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 TAOK3Q9H2K8 898 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 SAGE1Q9NXZ1 904 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 CNOT6Q9ULM6 557 aaKnown RBP4.1□□□□□ -1.75
CD46-210ENST00000462968 KCTD3Q9Y597 815 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 PCDH11XQ9BZA7 1347 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 PCDH11YQ9BZA8 1340 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 LTBP3Q9NS15 1303 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 USP31Q70CQ4 1352 aa4.1□□□□□ -1.75
CD46-210ENST00000462968 VIRMAQ69YN4 1812 aaKnown RBP4.09□□□□□ -1.75
CD46-210ENST00000462968 TEX51A0A1B0GUA7 166 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 LOC105371045A0A1W2PR82 267 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 OTOL1A6NHN0 477 aaPredicted RBP4.09□□□□□ -1.75
CD46-210ENST00000462968 H0YIN7 160 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 CPNE3O75131 537 aaKnown RBP4.09□□□□□ -1.75
CD46-210ENST00000462968 ESR1P03372 595 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 TRHRP34981 398 aaPredicted RBP4.09□□□□□ -1.75
CD46-210ENST00000462968 HK2P52789 917 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 NOGQ13253 232 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 ZNF385BQ569K4 471 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 TMEM151BQ8IW70 566 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 UBE2FQ969M7 185 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 CCDC74AQ96AQ1 378 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 PBXIP1Q96AQ6 731 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 GPN3Q9UHW5 284 aaPredicted RBP4.09□□□□□ -1.75
CD46-210ENST00000462968 ASAP1Q9ULH1 1129 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 MAP3K19Q56UN5 1328 aa4.09□□□□□ -1.75
CD46-210ENST00000462968 SMG6Q86US8 1419 aaKnown RBP4.09□□□□□ -1.75
CD46-210ENST00000462968 TOGARAM1Q9Y4F4 1720 aa4.09□□□□□ -1.76
CD46-210ENST00000462968 CYP27B1O15528 508 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 MEGF6O75095 1541 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 C4AP0C0L4 1744 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 NME2P22392 152 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 FMR1Q06787 632 aaKnown RBP eCLIP4.08□□□□□ -1.76
CD46-210ENST00000462968 LTBP1Q14766 1721 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 SOGA3Q5TF21 947 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 KTN1Q86UP2 1357 aaKnown RBP4.08□□□□□ -1.76
CD46-210ENST00000462968 C2CD5Q86YS7 1000 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.08□□□□□ -1.761e-6■■■□□ 18.3
CD46-210ENST00000462968 KCT2Q8NC54 265 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 THSD7BQ9C0I4 1608 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 USP42Q9H9J4 1324 aaKnown RBP4.08□□□□□ -1.76
CD46-210ENST00000462968 CENPJQ9HC77 1338 aaPredicted RBP4.08□□□□□ -1.76
CD46-210ENST00000462968 CD163L1Q9NR16 1453 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 TMOD3Q9NYL9 352 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 CSADQ9Y600 493 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 ARFGEF1Q9Y6D6 1849 aa4.08□□□□□ -1.76
CD46-210ENST00000462968 DOT1LQ8TEK3 1739 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 INSRP06213 1382 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 RNF123Q5XPI4 1314 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 EVC2Q86UK5 1308 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 DCDC2CA8MYV0 355 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 TRAF5O00463 557 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 HOXC9P31274 260 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 AMPHP49418 695 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 EFEMP1Q12805 493 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 SSPNQ14714 243 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 ZXDCQ2QGD7 858 aaPredicted RBP4.07□□□□□ -1.76
CD46-210ENST00000462968 NBPF6Q5VWK0 638 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 TMPRSS7Q7RTY8 843 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 ZNF605Q86T29 641 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 C12orf40Q86WS4 652 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 NME9Q86XW9 330 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 GPC2Q8N158 579 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 ZNF622Q969S3 477 aaKnown RBP eCLIP4.07□□□□□ -1.762e-9■□□□□ 9.2
CD46-210ENST00000462968 NBPF4Q96M43 638 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 EMILIN2Q9BXX0 1053 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 SLC6A17Q9H1V8 727 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 ADAMTS10Q9H324 1103 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 ZNF552Q9H707 407 aaPredicted RBP4.07□□□□□ -1.76
CD46-210ENST00000462968 RNF186Q9NXI6 227 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 ZSWIM5Q9P217 1185 aa4.07□□□□□ -1.76
CD46-210ENST00000462968 SRP68Q9UHB9 627 aaKnown RBP4.07□□□□□ -1.76
CD46-210ENST00000462968 TPX2Q9ULW0 747 aaKnown RBP4.07□□□□□ -1.76
CD46-210ENST00000462968 ZNF541Q9H0D2 1346 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms