RNA–Protein interactions for RNA: ENST00000462687.1

RIT1-204, Transcript of Ras like without CAAX 1, human

TSL 3

Gene RIT1, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIT1-204	ENST00000462687	HERC5	Q9UII4	1024 aa	Known RBP	12.85	□□□□□ -0.35
RIT1-204	ENST00000462687	PHIP	Q8WWQ0	1821 aa		12.84	□□□□□ -0.35
RIT1-204	ENST00000462687	TRIM75P	A6NK02	468 aa		12.84	□□□□□ -0.35
RIT1-204	ENST00000462687	CYP2D6	P10635	497 aa		12.84	□□□□□ -0.35
RIT1-204	ENST00000462687	PLCD1	P51178	756 aa		12.84	□□□□□ -0.35
RIT1-204	ENST00000462687	NUCB1	Q02818	461 aa		12.84	□□□□□ -0.35
RIT1-204	ENST00000462687	RRP1B	Q14684	758 aa	Known RBP	12.84	□□□□□ -0.35
RIT1-204	ENST00000462687	TAF1C	Q15572	869 aa	Predicted RBP	12.84	□□□□□ -0.35
RIT1-204	ENST00000462687	NOL9	Q5SY16	702 aa	Known RBP	12.84	□□□□□ -0.35
RIT1-204	ENST00000462687	AMOTL1	Q8IY63	956 aa		12.84	□□□□□ -0.35
RIT1-204	ENST00000462687	BTBD19	C9JJ37	291 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	MPHOSPH10	O00566	681 aa	Known RBP	12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	LZTS3	O60299	673 aa	Predicted RBP	12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	ZFY	P08048	801 aa	Predicted RBP	12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	CAP2	P40123	477 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	DGKG	P49619	791 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	SPP2	Q13103	211 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	FAM43A	Q8N2R8	423 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	APPBP2	Q92624	585 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	OSBP2	Q969R2	916 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	SEC62	Q99442	399 aa	Known RBP	12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	ALG2	Q9H553	416 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	KLF15	Q9UIH9	416 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	SERPINB13	Q9UIV8	391 aa		12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	COL2A1	P02458	1487 aa	Predicted RBP	12.83	□□□□□ -0.36
RIT1-204	ENST00000462687	LAMB1	P07942	1786 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	CYP2D7	A0A087X1C5	515 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	USP17L5	A8MUK1	530 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	MINDY4B	A8MYZ0	360 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687		M0R2C6	588 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	FAM157B	P0CG42	384 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	CRHR2	Q13324	411 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	DGKZ	Q13574	1117 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	CERKL	Q49MI3	558 aa	Predicted RBP	12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	CHSY3	Q70JA7	882 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	EVI5L	Q96CN4	794 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	ZFYVE28	Q9HCC9	887 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	AVEN	Q9NQS1	362 aa	Predicted RBP	12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	ATP8A2	Q9NTI2	1148 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	STAP2	Q9UGK3	403 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	AFG3L2	Q9Y4W6	797 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	SALL3	Q9BXA9	1300 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	PTPRF	P10586	1907 aa		12.82	□□□□□ -0.36
RIT1-204	ENST00000462687	USP17L12	C9JPN9	530 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	USP17L21	D6R901	530 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	PDHX	O00330	501 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	CXCL11	O14625	94 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	GPAA1	O43292	621 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	FKTN	O75072	461 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	GH2	P01242	217 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	JAG1	P78504	1218 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	NCOA4	Q13772	614 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	RAB3GAP1	Q15042	981 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	FCHSD1	Q86WN1	690 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	PLEKHM2	Q8IWE5	1019 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	DYNLL2	Q96FJ2	89 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	STRBP	Q96SI9	672 aa	Known RBP	12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	DNAJC18	Q9H819	358 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	AS3MT	Q9HBK9	375 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	CABP5	Q9NP86	173 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	ZNF358	Q9NW07	568 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	SCHIP1	Q9P0W5	487 aa	Predicted RBP	12.81	□□□□□ -0.36
RIT1-204	ENST00000462687	PRR12	Q9ULL5	1215 aa		12.81	□□□□□ -0.36
RIT1-204	ENST00000462687		K7ELQ4	463 aa	Predicted RBP	12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	ASNS	P08243	561 aa		12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	TXLNA	P40222	546 aa		12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	TDO2	P48775	406 aa		12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	ZYX	Q15942	572 aa	Known RBP	12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	ABCB5	Q2M3G0	1257 aa		12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	CCDC129	Q6ZRS4	1044 aa		12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	FASTKD5	Q7L8L6	764 aa	Known RBP	12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	SLC44A5	Q8NCS7	719 aa		12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	ZNF280C	Q8ND82	737 aa		12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	NOP53	Q9NZM5	478 aa	Known RBP	12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	KCNH4	Q9UQ05	1017 aa		12.8	□□□□□ -0.36
RIT1-204	ENST00000462687	SMIM22	K7EJ46	135 aa		12.79	□□□□□ -0.36
RIT1-204	ENST00000462687	NEFL	P07196	543 aa		12.79	□□□□□ -0.36
RIT1-204	ENST00000462687	HMGCS2	P54868	508 aa		12.79	□□□□□ -0.36
RIT1-204	ENST00000462687	PCBP4	P57723	403 aa	Known RBP	12.79	□□□□□ -0.36
RIT1-204	ENST00000462687	SAMD5	Q5TGI4	173 aa		12.79	□□□□□ -0.36
RIT1-204	ENST00000462687	CTR9	Q6PD62	1173 aa		12.79	□□□□□ -0.36
RIT1-204	ENST00000462687	MARK1	Q9P0L2	795 aa		12.79	□□□□□ -0.36
RIT1-204	ENST00000462687	CPA4	Q9UI42	421 aa		12.79	□□□□□ -0.36
RIT1-204	ENST00000462687	ZBTB21	Q9ULJ3	1066 aa		12.79	□□□□□ -0.36
RIT1-204	ENST00000462687		A0A0G2JLL6	359 aa	Predicted RBP	12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	GSG1L2	A8MUP6	293 aa		12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	PATL2	C9JE40	543 aa	Known RBP	12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	CYP2C8	P10632	490 aa		12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	SHMT1	P34896	483 aa		12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	SP3	Q02447	781 aa		12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	ZMYM1	Q5SVZ6	1142 aa		12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	TATDN1	Q6P1N9	297 aa		12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	PRRT2	Q7Z6L0	340 aa	Predicted RBP	12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	ANKRD23	Q86SG2	305 aa		12.78	□□□□□ -0.36
RIT1-204	ENST00000462687	METTL16	Q86W50	562 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms