RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 ANO1Q5XXA6 986 aa18.38■□□□□ 0.53
ERCC3-206ENST00000462306 TMTC3Q6ZXV5 915 aa18.38■□□□□ 0.53
ERCC3-206ENST00000462306 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
ERCC3-206ENST00000462306 DIS3LQ8TF46 1054 aaKnown RBP18.38■□□□□ 0.53
ERCC3-206ENST00000462306 BRF1Q92994 677 aa18.38■□□□□ 0.53
ERCC3-206ENST00000462306 TNRC18O15417 2968 aaPredicted RBP18.38■□□□□ 0.53
ERCC3-206ENST00000462306 MCM3APO60318 1980 aa18.37■□□□□ 0.53
ERCC3-206ENST00000462306 ALDH5A1P51649 535 aaPredicted RBP18.37■□□□□ 0.53
ERCC3-206ENST00000462306 RCAN1P53805 252 aa18.37■□□□□ 0.53
ERCC3-206ENST00000462306 FGD1P98174 961 aa18.37■□□□□ 0.53
ERCC3-206ENST00000462306 GHRHRQ02643 423 aa18.37■□□□□ 0.53
ERCC3-206ENST00000462306 APOBRQ0VD83 1088 aa18.37■□□□□ 0.53
ERCC3-206ENST00000462306 MCF2L2Q86YR7 1114 aa18.37■□□□□ 0.53
ERCC3-206ENST00000462306 SYTL5Q8TDW5 730 aaPredicted RBP18.37■□□□□ 0.53
ERCC3-206ENST00000462306 PIBF1Q8WXW3 757 aa18.37■□□□□ 0.53
ERCC3-206ENST00000462306 RRP36Q96EU6 259 aaKnown RBP18.37■□□□□ 0.53
ERCC3-206ENST00000462306 PAWRQ96IZ0 340 aaKnown RBP18.37■□□□□ 0.53
ERCC3-206ENST00000462306 FAM217BQ9NTX9 383 aaPredicted RBP18.37■□□□□ 0.53
ERCC3-206ENST00000462306 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
ERCC3-206ENST00000462306 ADD3Q9UEY8 706 aaKnown RBP18.37■□□□□ 0.53
ERCC3-206ENST00000462306 ZHX1Q9UKY1 873 aaPredicted RBP18.37■□□□□ 0.53
ERCC3-206ENST00000462306 LOC102724159A0A0B4J2E5 919 aa18.36■□□□□ 0.53
ERCC3-206ENST00000462306 AKR1A1P14550 325 aa18.36■□□□□ 0.53
ERCC3-206ENST00000462306 FUT2Q10981 343 aa18.36■□□□□ 0.53
ERCC3-206ENST00000462306 TRAF1Q13077 416 aa18.36■□□□□ 0.53
ERCC3-206ENST00000462306 PWP2Q15269 919 aaKnown RBP18.36■□□□□ 0.53
ERCC3-206ENST00000462306 DNERQ8NFT8 737 aa18.36■□□□□ 0.53
ERCC3-206ENST00000462306 RBM28Q9NW13 759 aaKnown RBP18.36■□□□□ 0.53
ERCC3-206ENST00000462306 FAM184BQ9ULE4 1060 aa18.36■□□□□ 0.53
ERCC3-206ENST00000462306 CYP46A1Q9Y6A2 500 aa18.36■□□□□ 0.53
ERCC3-206ENST00000462306 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 GOLGA8BA8MQT2 603 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 ADCY6O43306 1168 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 EIF5BO60841 1220 aaKnown RBP18.35■□□□□ 0.53
ERCC3-206ENST00000462306 EDNRBP24530 442 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 CDC27P30260 824 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 HSD17B4P51659 736 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 EVCP57679 992 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 RTN1Q16799 776 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 CCDC144BQ3MJ40 725 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 C8orf34Q49A92 452 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 NECAB2Q7Z6G3 386 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 CCDC82Q8N4S0 544 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 LENG1Q96BZ8 264 aaPredicted RBP18.35■□□□□ 0.53
ERCC3-206ENST00000462306 UPF3BQ9BZI7 483 aaKnown RBP18.35■□□□□ 0.53
ERCC3-206ENST00000462306 LRRC37A2A6NM11 1700 aa18.35■□□□□ 0.53
ERCC3-206ENST00000462306 CFBP00751 764 aa18.34■□□□□ 0.53
ERCC3-206ENST00000462306 RARBP10826 455 aa18.34■□□□□ 0.53
ERCC3-206ENST00000462306 COL6A1P12109 1028 aa18.34■□□□□ 0.53
ERCC3-206ENST00000462306 ANAPC15P60006 121 aa18.34■□□□□ 0.53
ERCC3-206ENST00000462306 TOB2Q14106 344 aaPredicted RBP18.34■□□□□ 0.53
ERCC3-206ENST00000462306 TAPT1Q6NXT6 567 aa18.34■□□□□ 0.53
ERCC3-206ENST00000462306 SAMD3Q8N6K7 520 aa18.34■□□□□ 0.53
ERCC3-206ENST00000462306 IL17RAQ96F46 866 aa18.34■□□□□ 0.53
ERCC3-206ENST00000462306 TAAR1Q96RJ0 339 aa18.34■□□□□ 0.53
ERCC3-206ENST00000462306 SEC63Q9UGP8 760 aaKnown RBP18.34■□□□□ 0.53
ERCC3-206ENST00000462306 PDE4DIPQ5VU43 2346 aa18.33■□□□□ 0.53
ERCC3-206ENST00000462306 NID2Q14112 1375 aa18.33■□□□□ 0.53
ERCC3-206ENST00000462306 CNTNAP5Q8WYK1 1306 aa18.33■□□□□ 0.53
ERCC3-206ENST00000462306 hCG_1642624A0A1W2PR95 340 aa18.33■□□□□ 0.52
ERCC3-206ENST00000462306 PPP2R5BQ15173 497 aa18.33■□□□□ 0.52
ERCC3-206ENST00000462306 EEPD1Q7L9B9 569 aa18.33■□□□□ 0.52
ERCC3-206ENST00000462306 FBXO16Q8IX29 292 aaPredicted RBP18.33■□□□□ 0.52
ERCC3-206ENST00000462306 ARRDC4Q8NCT1 418 aa18.33■□□□□ 0.52
ERCC3-206ENST00000462306 C11orf49Q9H6J7 331 aa18.33■□□□□ 0.52
ERCC3-206ENST00000462306 VTA1Q9NP79 307 aa18.33■□□□□ 0.52
ERCC3-206ENST00000462306 XPNPEP3Q9NQH7 507 aa18.33■□□□□ 0.52
ERCC3-206ENST00000462306 PDGFCQ9NRA1 345 aa18.33■□□□□ 0.52
ERCC3-206ENST00000462306 MAP3K20Q9NYL2 800 aaKnown RBP18.33■□□□□ 0.52
ERCC3-206ENST00000462306 NAP1L2Q9ULW6 460 aaPredicted RBP18.33■□□□□ 0.52
ERCC3-206ENST00000462306 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.32■□□□□ 0.52
ERCC3-206ENST00000462306 DNM1LO00429 736 aa18.32■□□□□ 0.52
ERCC3-206ENST00000462306 ADD1P35611 737 aaKnown RBP18.32■□□□□ 0.52
ERCC3-206ENST00000462306 METAP2P50579 478 aaKnown RBP eCLIP18.32■□□□□ 0.52
ERCC3-206ENST00000462306 LRRC41Q15345 812 aa18.32■□□□□ 0.52
ERCC3-206ENST00000462306 GJC2Q5T442 439 aaPredicted RBP18.32■□□□□ 0.52
ERCC3-206ENST00000462306 NSUN6Q8TEA1 469 aaKnown RBP18.32■□□□□ 0.52
ERCC3-206ENST00000462306 RMDN3Q96TC7 470 aa18.32■□□□□ 0.52
ERCC3-206ENST00000462306 ADAMTS4O75173 837 aa18.31■□□□□ 0.52
ERCC3-206ENST00000462306 DUSP11O75319 330 aaKnown RBP18.31■□□□□ 0.52
ERCC3-206ENST00000462306 PGK1P00558 417 aa18.31■□□□□ 0.52
ERCC3-206ENST00000462306 PDIA3P30101 505 aaKnown RBP18.31■□□□□ 0.52
ERCC3-206ENST00000462306 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
ERCC3-206ENST00000462306 ADCYAP1R1P41586 468 aa18.31■□□□□ 0.52
ERCC3-206ENST00000462306 PDE4DQ08499 809 aa18.31■□□□□ 0.52
ERCC3-206ENST00000462306 HTATIP2Q9BUP3 242 aa18.31■□□□□ 0.52
ERCC3-206ENST00000462306 PDRG1Q9NUG6 133 aa18.31■□□□□ 0.52
ERCC3-206ENST00000462306 SYNRGQ9UMZ2 1314 aa18.3■□□□□ 0.52
ERCC3-206ENST00000462306 CCDC196A0A1B0GTZ2 297 aa18.3■□□□□ 0.52
ERCC3-206ENST00000462306 RBM47A0AV96 593 aaKnown RBP18.3■□□□□ 0.52
ERCC3-206ENST00000462306 B4DLN1 442 aa18.3■□□□□ 0.52
ERCC3-206ENST00000462306 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
ERCC3-206ENST00000462306 POLR2MP0CAP2 368 aa18.3■□□□□ 0.52
ERCC3-206ENST00000462306 MRPL12P52815 198 aaKnown RBP18.3■□□□□ 0.52
ERCC3-206ENST00000462306 TNFAIP2Q03169 654 aa18.3■□□□□ 0.52
ERCC3-206ENST00000462306 TMEM63BQ5T3F8 832 aa18.3■□□□□ 0.52
ERCC3-206ENST00000462306 IQSEC1Q6DN90 963 aa18.3■□□□□ 0.52
ERCC3-206ENST00000462306 IWS1Q96ST2 819 aa18.3■□□□□ 0.52
ERCC3-206ENST00000462306 MPHOSPH6Q99547 160 aaKnown RBP18.3■□□□□ 0.52
ERCC3-206ENST00000462306 UPF3AQ9H1J1 476 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms