RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SNRPB2P08579 225 aaKnown RBP4.3□□□□□ -1.72
HDAC6-212ENST00000461608 SRFP11831 508 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 SOX5P35711 763 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 TNK2Q07912 1038 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 PABPC4Q13310 644 aaKnown RBP eCLIP4.3□□□□□ -1.72
HDAC6-212ENST00000461608 KCNA10Q16322 511 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 NKPD1Q17RQ9 610 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 TKFCQ3LXA3 575 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 TM4SF20Q53R12 229 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 ACBD5Q5T8D3 534 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-212ENST00000461608 E4F1Q66K89 784 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-212ENST00000461608 KRT26Q7Z3Y9 468 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 PPM1KQ8N3J5 372 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 BTN2A2Q8WVV5 523 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 LIN37Q96GY3 246 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-212ENST00000461608 KIRREL1Q96J84 757 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 IFT57Q9NWB7 429 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 CD2APQ9Y5K6 639 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 BACE2Q9Y5Z0 518 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 ZNF503-AS2A6NEH8 195 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 B4E1Z4 1266 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 AQP7O14520 342 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 PRODHO43272 600 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 PSPNO60542 156 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 SYN1P17600 705 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 CDK11BP21127 795 aaKnown RBP4.29□□□□□ -1.72
HDAC6-212ENST00000461608 PCBP3P57721 371 aaKnown RBP4.29□□□□□ -1.72
HDAC6-212ENST00000461608 ZP2Q05996 745 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 KCNAB2Q13303 367 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 SNW1Q13573 536 aaKnown RBP4.29□□□□□ -1.72
HDAC6-212ENST00000461608 TESK1Q15569 626 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 FYB2Q5VWT5 728 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 EEF1DP3Q658K8 133 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 IQCEQ6IPM2 695 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 RCSD1Q6JBY9 416 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 RSPO2Q6UXX9 243 aaPredicted RBP4.29□□□□□ -1.72
HDAC6-212ENST00000461608 CYP2R1Q6VVX0 501 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 TMPRSS7Q7RTY8 843 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 TMC3Q7Z5M5 1100 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 CHAC2Q8WUX2 184 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 PTPRN2Q92932 1015 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 BRF1Q92994 677 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 CCDC120Q96HB5 630 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 ZDHHC15Q96MV8 337 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 ZCCHC4Q9H5U6 513 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 TYW1Q9NV66 732 aaKnown RBP4.29□□□□□ -1.72
HDAC6-212ENST00000461608 MAPRE3Q9UPY8 281 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 SNX11Q9Y5W9 270 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 ST14Q9Y5Y6 855 aa4.29□□□□□ -1.72
HDAC6-212ENST00000461608 PRR33A8MZF0 331 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 H0Y8X5 98 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 AURKAO14965 403 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 ZNF205O95201 554 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 NPTXRO95502 500 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 CPEP16870 476 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 L1CAMP32004 1257 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 FLT3P36888 993 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 STAT3P40763 770 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 KCNJ6P48051 423 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 PPP2R5DQ14738 602 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 FAM209AQ5JX71 171 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 SLC35F1Q5T1Q4 408 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 STYK1Q6J9G0 422 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 RNF111Q6ZNA4 994 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 TSPYL5Q86VY4 417 aaPredicted RBP4.28□□□□□ -1.72
HDAC6-212ENST00000461608 AHI1Q8N157 1196 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 LINC00116Q8NCU8 138 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 GSTCDQ8NEC7 633 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 DCAF4Q8WV16 495 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 COPS5Q92905 334 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 OSBP2Q969R2 916 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 DIRC2Q96SL1 478 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 NSUN3Q9H649 340 aaKnown RBP4.28□□□□□ -1.72
HDAC6-212ENST00000461608 CAAP1Q9H8G2 361 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 PCDH12Q9NPG4 1184 aa4.28□□□□□ -1.72
HDAC6-212ENST00000461608 GPR55Q9Y2T6 319 aaPredicted RBP4.28□□□□□ -1.72
HDAC6-212ENST00000461608 SSU72P8A0A1W2PR75 194 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 MEFVO15553 781 aaPredicted RBP4.27□□□□□ -1.73
HDAC6-212ENST00000461608 TBX1O43435 398 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 DLX3O60479 287 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 LRRN2O75325 713 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 ASLP04424 464 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 CD3EP07766 207 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 IGFALSP35858 605 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 MASP1P48740 699 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 SEPHS1P49903 392 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 SCRN1Q12765 414 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 YOD1Q5VVQ6 348 aaPredicted RBP4.27□□□□□ -1.73
HDAC6-212ENST00000461608 FOXB2Q5VYV0 432 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 CRTC3Q6UUV7 619 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 ATG14Q6ZNE5 492 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 PRR23BQ6ZRT6 265 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 THNSL2Q86YJ6 484 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 TMEM145Q8NBT3 493 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 PANK1Q8TE04 598 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 SYTL4Q96C24 671 aaPredicted RBP4.27□□□□□ -1.73
HDAC6-212ENST00000461608 TCTN2Q96GX1 697 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 C1orf159Q96HA4 380 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 EPB41L4BQ9H329 900 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms