RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 SOWAHBA6NEL2 793 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 NDUFB10O96000 172 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 CTR9Q6PD62 1173 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 CPXCR1Q8N123 301 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 PCSK9Q8NBP7 692 aaKnown RBP11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 PPP1R13LQ8WUF5 828 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 DDX11Q96FC9 970 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 DNAJC2Q99543 621 aaKnown RBP11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 TEX13BQ9BXU2 312 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 SH2D4AQ9H788 454 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 PDGFCQ9NRA1 345 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 GNEQ9Y223 722 aaKnown RBP11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 TANC1Q9C0D5 1861 aa11.17□□□□□ -0.62
NECTIN3-202ENST00000461477 IPO8O15397 1037 aaKnown RBP11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 LPXNO60711 386 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 CA3P07451 260 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 SMPD1P17405 629 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 RASA1P20936 1047 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 ADD2P35612 726 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 ITGA7Q13683 1181 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 CCDC174Q6PII3 467 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 TMED8Q6PL24 325 aaPredicted RBP11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 STK11IPQ8N1F8 1099 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 IL27Q8NEV9 243 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 CCDC17Q96LX7 622 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 ABHD16BQ9H3Z7 469 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 KANSL2Q9H9L4 492 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 ATP8A2Q9NTI2 1148 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 PCDHA11Q9Y5I1 949 aa11.16□□□□□ -0.62
NECTIN3-202ENST00000461477 F5H6K3 240 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 ATP2A1O14983 1001 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 TLR3O15455 904 aaKnown RBP11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 COPB2P35606 906 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 KLRC3Q07444 240 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 SKIV2LQ15477 1246 aaKnown RBP11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 FAM133AQ8N9E0 248 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 RHPN1Q8TCX5 695 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 PURBQ96QR8 312 aaKnown RBP11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 ZBED2Q9BTP6 218 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 SLC38A10Q9HBR0 1119 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 GOPCQ9HD26 462 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 TRMT13Q9NUP7 481 aaKnown RBP11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 SLC4A7Q9Y6M7 1214 aa11.15□□□□□ -0.62
NECTIN3-202ENST00000461477 ZNF536O15090 1300 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 IGKV6D-41A0A0C4DH26 115 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 ZBBXA8MT70 800 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 PPP1R3GB7ZBB8 358 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 CYP2C9P11712 490 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 ATP2A2P16615 1042 aaKnown RBP11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 TNFAIP2Q03169 654 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 TAP1Q03518 808 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 TTF1Q15361 905 aaPredicted RBP11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 FSCN1Q16658 493 aaKnown RBP11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 ZKSCAN2Q63HK3 967 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 TAPT1Q6NXT6 567 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 TLK2Q86UE8 772 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 ANKRD35Q8N283 1001 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 DDX12PQ92771 950 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 KIFC2Q96AC6 838 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 PUS7LQ9H0K6 701 aaKnown RBP11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 HOMER2Q9NSB8 354 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 HCSTQ9UBK5 93 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 TRIP12Q14669 1992 aaPredicted RBP11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 SCN10AQ9Y5Y9 1956 aa11.14□□□□□ -0.63
NECTIN3-202ENST00000461477 DYNC1LI2O43237 492 aaPredicted RBP11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 TMEM31Q5JXX7 168 aa11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 RASGRP2Q7LDG7 609 aa11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 TMCO2Q7Z6W1 182 aaPredicted RBP11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 ALYREFQ86V81 257 aaKnown RBP11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 PRPF38AQ8NAV1 312 aaKnown RBP11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 ARNTL2Q8WYA1 636 aa11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 CHMP4CQ96CF2 233 aa11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 ALDH8A1Q9H2A2 487 aaPredicted RBP11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 PAG1Q9NWQ8 432 aa11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 SLC4A4Q9Y6R1 1079 aa11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 VPS13AQ96RL7 3174 aa11.13□□□□□ -0.63
NECTIN3-202ENST00000461477 LCHNA4D1U4 455 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 GPR37L1O60883 481 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 SNAP25P60880 206 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 GRB10Q13322 594 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 TCTN1Q2MV58 587 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 EEPD1Q7L9B9 569 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 ITPRIPQ8IWB1 547 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 FBXO16Q8IX29 292 aaPredicted RBP11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 SIRT2Q8IXJ6 389 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 KCTD12Q96CX2 325 aaKnown RBP11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 BCL11AQ9H165 835 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 BOLA2Q9H3K6 86 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 SPC25Q9HBM1 224 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 NYAP2Q9P242 653 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 CLIP2Q9UDT6 1046 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 HCN4Q9Y3Q4 1203 aa11.12□□□□□ -0.63
NECTIN3-202ENST00000461477 ZBED4O75132 1171 aa11.11□□□□□ -0.63
NECTIN3-202ENST00000461477 PRDM1O75626 825 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms