RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 C7orf25Q9BPX7 421 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.76■■□□□ 1.23
CCM2-203ENST00000461377 LRWD1Q9UFC0 647 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 CLRN2A0PK11 232 aa22.75■■□□□ 1.23
CCM2-203ENST00000461377 DYNC1I1O14576 645 aa22.75■■□□□ 1.23
CCM2-203ENST00000461377 GCFC2P16383 781 aaKnown RBP22.75■■□□□ 1.23
CCM2-203ENST00000461377 TRIM9Q9C026 710 aa22.75■■□□□ 1.23
CCM2-203ENST00000461377 TRMT1Q9NXH9 659 aaKnown RBP22.75■■□□□ 1.23
CCM2-203ENST00000461377 KIF13BQ9NQT8 1826 aa22.74■■□□□ 1.23
CCM2-203ENST00000461377 GRB10Q13322 594 aa22.74■■□□□ 1.23
CCM2-203ENST00000461377 SPDYE2Q495Y8 402 aa22.74■■□□□ 1.23
CCM2-203ENST00000461377 GIMAP8Q8ND71 665 aaPredicted RBP22.74■■□□□ 1.23
CCM2-203ENST00000461377 NUP88Q99567 741 aaPredicted RBP22.74■■□□□ 1.23
CCM2-203ENST00000461377 NAP1L4Q99733 375 aaKnown RBP22.74■■□□□ 1.23
CCM2-203ENST00000461377 RAB34Q9BZG1 259 aa22.74■■□□□ 1.23
CCM2-203ENST00000461377 LIMA1Q9UHB6 759 aaKnown RBP22.74■■□□□ 1.23
CCM2-203ENST00000461377 CNTNAP1P78357 1384 aa22.74■■□□□ 1.23
CCM2-203ENST00000461377 PBX1P40424 430 aa22.74■■□□□ 1.23
CCM2-203ENST00000461377 GOLGA8FQ08AF8 430 aa22.74■■□□□ 1.23
CCM2-203ENST00000461377 GOLGA8DPQ0D2H9 430 aa22.74■■□□□ 1.23
CCM2-203ENST00000461377 OGFOD1Q8N543 542 aa22.74■■□□□ 1.23
CCM2-203ENST00000461377 DDX25Q9UHL0 483 aaKnown RBP22.74■■□□□ 1.23
CCM2-203ENST00000461377 ZBTB12Q9Y330 459 aaPredicted RBP22.74■■□□□ 1.23
CCM2-203ENST00000461377 TEX33O43247 280 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 COBLO75128 1261 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 BMP3P12645 472 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 SPAG1Q07617 926 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 PTPN14Q15678 1187 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 SYDE2Q5VT97 1194 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 BTNL9Q6UXG8 535 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 TMEM139Q8IV31 216 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 PNMA5Q96PV4 448 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 STK17AQ9UEE5 414 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 ZNRF3Q9ULT6 936 aa22.73■■□□□ 1.23
CCM2-203ENST00000461377 A0A1W2PRG0 241 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 LRRC10BA6NIK2 292 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L15C9J2P7 530 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L13C9JLJ4 530 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L11C9JVI0 530 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L18D6R9N7 530 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L22D6RA61 530 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L17D6RBQ6 530 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L19D6RCP7 530 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L20D6RJB6 530 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 AMPD3Q01432 767 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L24Q0WX57 530 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 FILIP1LQ4L180 1135 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 CEP135Q66GS9 1140 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 USP17L6PQ6QN14 398 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 TC2NQ8N9U0 490 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 MTMR14Q8NCE2 650 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 AMNQ9BXJ7 453 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 MAPK8IP1Q9UQF2 711 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 RIOK3O14730 519 aaKnown RBP22.72■■□□□ 1.23
CCM2-203ENST00000461377 FKBP1CQ5VVH2 108 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 NIM1KQ8IY84 436 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 AGBL3Q8NEM8 1001 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 HAS1Q92839 578 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 PPP1R13BQ96KQ4 1090 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 BLOC1S4Q9NUP1 217 aa22.72■■□□□ 1.23
CCM2-203ENST00000461377 AP3B2Q13367 1082 aa22.71■■□□□ 1.23
CCM2-203ENST00000461377 STIM1Q13586 685 aa22.71■■□□□ 1.23
CCM2-203ENST00000461377 KRT31Q15323 416 aa22.71■■□□□ 1.23
CCM2-203ENST00000461377 CCDC47Q96A33 483 aaKnown RBP22.71■■□□□ 1.23
CCM2-203ENST00000461377 ANO3Q9BYT9 981 aa22.71■■□□□ 1.23
CCM2-203ENST00000461377 PAXBP1Q9Y5B6 917 aa22.71■■□□□ 1.23
CCM2-203ENST00000461377 POTEMA6NI47 508 aa22.7■■□□□ 1.23
CCM2-203ENST00000461377 H7C1D1 291 aa22.7■■□□□ 1.23
CCM2-203ENST00000461377 MEIS2O14770 477 aa22.7■■□□□ 1.23
CCM2-203ENST00000461377 PRKCSHP14314 528 aaPredicted RBP22.7■■□□□ 1.23
CCM2-203ENST00000461377 FBXO11Q86XK2 927 aa22.7■■□□□ 1.23
CCM2-203ENST00000461377 GTPBP4Q9BZE4 634 aaKnown RBP22.7■■□□□ 1.23
CCM2-203ENST00000461377 USP11P51784 963 aa22.7■■□□□ 1.22
CCM2-203ENST00000461377 ASIC1P78348 528 aa22.7■■□□□ 1.22
CCM2-203ENST00000461377 TMEM119Q4V9L6 283 aa22.7■■□□□ 1.22
CCM2-203ENST00000461377 TCP11X2Q5H9J9 407 aa22.7■■□□□ 1.22
CCM2-203ENST00000461377 MCTP2Q6DN12 878 aa22.7■■□□□ 1.22
CCM2-203ENST00000461377 SV2BQ7L1I2 683 aa22.7■■□□□ 1.22
CCM2-203ENST00000461377 FCHSD1Q86WN1 690 aa22.7■■□□□ 1.22
CCM2-203ENST00000461377 ARHGEF10LQ9HCE6 1279 aa22.7■■□□□ 1.22
CCM2-203ENST00000461377 EXOC1Q9NV70 894 aa22.7■■□□□ 1.22
CCM2-203ENST00000461377 CYP3A7-CYP3A51PA0A087WV96 503 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 KCNJ18B7U540 433 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 KIF2AO00139 706 aaPredicted RBP22.69■■□□□ 1.22
CCM2-203ENST00000461377 PSMA7O14818 248 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 CYP3A7P24462 503 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 MMP14P50281 582 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 SNAP25P60880 206 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 KCNJ12Q14500 433 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 KRT79Q5XKE5 535 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 SNX29Q8TEQ0 813 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 DHTKD1Q96HY7 919 aaPredicted RBP22.69■■□□□ 1.22
CCM2-203ENST00000461377 MBOAT7Q96N66 472 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 MYH7BA7E2Y1 1941 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 ITIH6Q6UXX5 1313 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 ARHGAP6O43182 974 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 CCP110O43303 1012 aa22.69■■□□□ 1.22
CCM2-203ENST00000461377 COPB1P53618 953 aaKnown RBP22.69■■□□□ 1.22
CCM2-203ENST00000461377 PMS1P54277 932 aaKnown RBP22.69■■□□□ 1.22
CCM2-203ENST00000461377 PDE4DQ08499 809 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms