RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 TEPSINQ96N21 525 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 MTRQ99707 1265 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 NAP1L4Q99733 375 aaKnown RBP12.31□□□□□ -0.44
IFT88-204ENST00000461115 TRIM5Q9C035 493 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 DACH1Q9UI36 760 aa12.31□□□□□ -0.44
IFT88-204ENST00000461115 CYP3A7-CYP3A51PA0A087WV96 503 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 CLRN2A0PK11 232 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 BIN1O00499 593 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 SLC26A4O43511 780 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 NEMFO60524 1076 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 GCFC2P16383 781 aaKnown RBP12.3□□□□□ -0.44
IFT88-204ENST00000461115 CYP3A7P24462 503 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 CAP2P40123 477 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 PRELPP51888 382 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 MYL5Q02045 173 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 TRAF1Q13077 416 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 AP3B2Q13367 1082 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 PDIA5Q14554 519 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 CCDC96Q2M329 555 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 NAALADL2Q58DX5 795 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 PDILTQ8N807 584 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 DHX58Q96C10 678 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 DEFB129Q9H1M3 183 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 ARHGEF10LQ9HCE6 1279 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 DISC1Q9NRI5 854 aa12.3□□□□□ -0.44
IFT88-204ENST00000461115 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
IFT88-204ENST00000461115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
IFT88-204ENST00000461115 PHF20L1A8MW92 1017 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 ZNF18P17022 549 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 SLC16A2P36021 539 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 TXLNAP40222 546 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 TNNI2P48788 182 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 USP11P51784 963 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 TNFAIP1Q13829 316 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 R3HDM1Q15032 1099 aaKnown RBP12.29□□□□□ -0.44
IFT88-204ENST00000461115 CDC37Q16543 378 aaPredicted RBP12.29□□□□□ -0.44
IFT88-204ENST00000461115 SYDE2Q5VT97 1194 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 CDAN1Q8IWY9 1227 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 AMNQ9BXJ7 453 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 PSTPIP2Q9H939 334 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 KBTBD4Q9NVX7 518 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 PARP14Q460N5 1801 aa12.29□□□□□ -0.44
IFT88-204ENST00000461115 PIK3CDO00329 1044 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 MEIS2O14770 477 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 CCNT1O60563 726 aaKnown RBP12.28□□□□□ -0.44
IFT88-204ENST00000461115 ASNSP08243 561 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
IFT88-204ENST00000461115 TPM4P67936 248 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 ATP2B2Q01814 1243 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 CUL4BQ13620 913 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 LETM2Q2VYF4 491 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 UPF1Q92900 1129 aaKnown RBP eCLIP12.28□□□□□ -0.44
IFT88-204ENST00000461115 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 MED15Q96RN5 788 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 MFRPQ9BY79 579 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 TMEM39BQ9GZU3 492 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 VCPKMTQ9H867 229 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 TMEM260Q9NX78 707 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 IMPACTQ9P2X3 320 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 PCDHA1Q9Y5I3 950 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 DOCK1Q14185 1865 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 FOSP01100 380 aaPredicted RBP12.28□□□□□ -0.44
IFT88-204ENST00000461115 PTMAP06454 111 aaKnown RBP12.28□□□□□ -0.44
IFT88-204ENST00000461115 HOXA7P31268 230 aaPredicted RBP12.28□□□□□ -0.44
IFT88-204ENST00000461115 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
IFT88-204ENST00000461115 KCNB1Q14721 858 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 CNNM4Q6P4Q7 775 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 GRAMD1CQ8IYS0 662 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 MMTAG2Q9BU76 263 aaKnown RBP12.28□□□□□ -0.44
IFT88-204ENST00000461115 KCNF1Q9H3M0 494 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 SH2D4AQ9H788 454 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 GOPCQ9HD26 462 aa12.28□□□□□ -0.44
IFT88-204ENST00000461115 PPP1R3GB7ZBB8 358 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 TMEM232C9JQI7 657 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 OPLAHO14841 1288 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 CIITAP33076 1130 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 UBA7P41226 1012 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 ECE1P42892 770 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 EMP3P54852 163 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 GHRHRQ02643 423 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 COBLL1Q53SF7 1204 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 KIAA1755Q5JYT7 1200 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 HYIQ5T013 277 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 FAM160B2Q86V87 743 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 KIAA1524Q8TCG1 905 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 ACER1Q8TDN7 264 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 HAS1Q92839 578 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.45
IFT88-204ENST00000461115 RANBP17Q9H2T7 1088 aaKnown RBP12.27□□□□□ -0.45
IFT88-204ENST00000461115 VEZTQ9HBM0 779 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 KCNMB3Q9NPA1 279 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 ZNF112Q9UJU3 913 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 PRR12Q9ULL5 1215 aa12.27□□□□□ -0.45
IFT88-204ENST00000461115 PHIPQ8WWQ0 1821 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 TBX3O15119 743 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 SLC37A4O43826 429 aa12.26□□□□□ -0.45
IFT88-204ENST00000461115 KLRC4O43908 158 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms