RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 SGPL1O95470 568 aa23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 PDIA3P30101 505 aaKnown RBP23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 METAP2P50579 478 aaKnown RBP eCLIP23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 GHRHRQ02643 423 aa23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 PPP2R5BQ15173 497 aa23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 CCDC82Q8N4S0 544 aa23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 U2AF1L4Q8WU68 220 aaKnown RBP23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 CRISPLD2Q9H0B8 497 aa23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 NRBP1Q9UHY1 535 aa23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 ADD1P35611 737 aaKnown RBP23.87■■□□□ 1.41
RPUSD3-210ENST00000460909 TRAF1Q13077 416 aa23.87■■□□□ 1.41
RPUSD3-210ENST00000460909 LHX8Q68G74 356 aa23.87■■□□□ 1.41
RPUSD3-210ENST00000460909 NAP1L2Q9ULW6 460 aaPredicted RBP23.87■■□□□ 1.41
RPUSD3-210ENST00000460909 ZNF865P0CJ78 1059 aaPredicted RBP23.86■■□□□ 1.41
RPUSD3-210ENST00000460909 CALML3P27482 149 aa23.86■■□□□ 1.41
RPUSD3-210ENST00000460909 MCF2L2Q86YR7 1114 aa23.86■■□□□ 1.41
RPUSD3-210ENST00000460909 COL20A1Q9P218 1284 aa23.86■■□□□ 1.41
RPUSD3-210ENST00000460909 FRMPD3Q5JV73 1810 aa23.86■■□□□ 1.41
RPUSD3-210ENST00000460909 hCG_1642624A0A1W2PR95 340 aa23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 HSD17B4P51659 736 aa23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 ARMCX2Q7L311 632 aa23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 MORC4Q8TE76 937 aa23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 ZNF274Q96GC6 653 aaPredicted RBP23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 KIF2CQ99661 725 aa23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 LARP6Q9BRS8 491 aaKnown RBP23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 KATNBL1Q9H079 304 aa23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 DDX49Q9Y6V7 483 aaKnown RBP23.85■■□□□ 1.41
RPUSD3-210ENST00000460909 CCDC196A0A1B0GTZ2 297 aa23.84■■□□□ 1.41
RPUSD3-210ENST00000460909 ASB14A6NK59 587 aa23.84■■□□□ 1.41
RPUSD3-210ENST00000460909 NTRK3Q16288 839 aa23.84■■□□□ 1.41
RPUSD3-210ENST00000460909 SYTL5Q8TDW5 730 aaPredicted RBP23.84■■□□□ 1.41
RPUSD3-210ENST00000460909 ADD3Q9UEY8 706 aaKnown RBP23.84■■□□□ 1.41
RPUSD3-210ENST00000460909 SEC63Q9UGP8 760 aaKnown RBP23.84■■□□□ 1.41
RPUSD3-210ENST00000460909 LRRC37A2A6NM11 1700 aa23.84■■□□□ 1.41
RPUSD3-210ENST00000460909 LOC102724159A0A0B4J2E5 919 aa23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 SEPT4O43236 478 aa23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 CNGA1P29973 690 aa23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 RBM25P49756 843 aaKnown RBP23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 ALDH5A1P51649 535 aaPredicted RBP23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 PWP2Q15269 919 aaKnown RBP23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 DNERQ8NFT8 737 aa23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 ABHD16BQ9H3Z7 469 aa23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 MAP3K20Q9NYL2 800 aaKnown RBP23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 DDX20Q9UHI6 824 aaKnown RBP23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 OGDHLQ9ULD0 1010 aa23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 CNPY2Q9Y2B0 182 aa23.83■■□□□ 1.41
RPUSD3-210ENST00000460909 CFBP00751 764 aa23.82■■□□□ 1.4
RPUSD3-210ENST00000460909 CAPN2P17655 700 aa23.82■■□□□ 1.4
RPUSD3-210ENST00000460909 ACVR2BQ13705 512 aa23.82■■□□□ 1.4
RPUSD3-210ENST00000460909 SAMD3Q8N6K7 520 aa23.82■■□□□ 1.4
RPUSD3-210ENST00000460909 TAAR1Q96RJ0 339 aa23.82■■□□□ 1.4
RPUSD3-210ENST00000460909 C22orf23Q9BZE7 217 aa23.82■■□□□ 1.4
RPUSD3-210ENST00000460909 NCOA5Q9HCD5 579 aaKnown RBP23.82■■□□□ 1.4
RPUSD3-210ENST00000460909 V9GY48 417 aaPredicted RBP23.82■■□□□ 1.4
RPUSD3-210ENST00000460909 TFRCP02786 760 aaKnown RBP23.81■■□□□ 1.4
RPUSD3-210ENST00000460909 EDNRBP24530 442 aa23.81■■□□□ 1.4
RPUSD3-210ENST00000460909 NEK4P51957 841 aa23.81■■□□□ 1.4
RPUSD3-210ENST00000460909 AK2P54819 239 aa23.81■■□□□ 1.4
RPUSD3-210ENST00000460909 CCT2P78371 535 aaKnown RBP23.81■■□□□ 1.4
RPUSD3-210ENST00000460909 UBE2Q1Q7Z7E8 422 aa23.81■■□□□ 1.4
RPUSD3-210ENST00000460909 TPCN1Q9ULQ1 816 aa23.81■■□□□ 1.4
RPUSD3-210ENST00000460909 TNRC18O15417 2968 aaPredicted RBP23.81■■□□□ 1.4
RPUSD3-210ENST00000460909 MSCO60682 206 aa23.8■■□□□ 1.4
RPUSD3-210ENST00000460909 MNX1P50219 401 aaPredicted RBP23.8■■□□□ 1.4
RPUSD3-210ENST00000460909 IFNAR1P17181 557 aa23.79■■□□□ 1.4
RPUSD3-210ENST00000460909 HOXA13P31271 388 aaPredicted RBP23.79■■□□□ 1.4
RPUSD3-210ENST00000460909 WWC2Q6AWC2 1192 aa23.79■■□□□ 1.4
RPUSD3-210ENST00000460909 ZHX1Q9UKY1 873 aaPredicted RBP23.79■■□□□ 1.4
RPUSD3-210ENST00000460909 GCOM1H8Y6P7 765 aaPredicted RBP23.78■■□□□ 1.4
RPUSD3-210ENST00000460909 POLR2MP0CAP2 368 aa23.78■■□□□ 1.4
RPUSD3-210ENST00000460909 ANKRD1Q15327 319 aa23.78■■□□□ 1.4
RPUSD3-210ENST00000460909 ANO1Q5XXA6 986 aa23.78■■□□□ 1.4
RPUSD3-210ENST00000460909 TYW1BQ6NUM6 668 aa23.78■■□□□ 1.4
RPUSD3-210ENST00000460909 HEATR3Q7Z4Q2 680 aa23.78■■□□□ 1.4
RPUSD3-210ENST00000460909 NSUN6Q8TEA1 469 aaKnown RBP23.78■■□□□ 1.4
RPUSD3-210ENST00000460909 GPKOWQ92917 476 aaPredicted RBP eCLIP23.78■■□□□ 1.4
RPUSD3-210ENST00000460909 RMDN3Q96TC7 470 aa23.78■■□□□ 1.4
RPUSD3-210ENST00000460909 MEIS2O14770 477 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 ADCY6O43306 1168 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 PRPF3O43395 683 aaKnown RBP23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 AKR1A1P14550 325 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 STK3Q13188 491 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 PKN1Q16512 942 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 CCDC144BQ3MJ40 725 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 TAPT1Q6NXT6 567 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 ANKLE1Q8NAG6 615 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 PHKBQ93100 1093 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 FAM184BQ9ULE4 1060 aa23.77■■□□□ 1.4
RPUSD3-210ENST00000460909 PIK3CDO00329 1044 aa23.76■■□□□ 1.39
RPUSD3-210ENST00000460909 PFKFB2O60825 505 aa23.76■■□□□ 1.39
RPUSD3-210ENST00000460909 PFKFB3Q16875 520 aaPredicted RBP23.76■■□□□ 1.39
RPUSD3-210ENST00000460909 EEPD1Q7L9B9 569 aa23.76■■□□□ 1.39
RPUSD3-210ENST00000460909 IWS1Q96ST2 819 aa23.76■■□□□ 1.39
RPUSD3-210ENST00000460909 RNF26Q9BY78 433 aaPredicted RBP23.76■■□□□ 1.39
RPUSD3-210ENST00000460909 BACH2Q9BYV9 841 aa23.76■■□□□ 1.39
RPUSD3-210ENST00000460909 VTA1Q9NP79 307 aa23.76■■□□□ 1.39
RPUSD3-210ENST00000460909 PXMP2Q9NR77 195 aa23.76■■□□□ 1.39
RPUSD3-210ENST00000460909 hCG_1984214I3L0E3 225 aa23.75■■□□□ 1.39
RPUSD3-210ENST00000460909 STXBP3O00186 592 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms