RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SLC52A1Q9NWF4 448 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 SUSD2Q9UGT4 822 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 MCM8Q9UJA3 840 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 GSG1L2A8MUP6 293 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 NFIBO00712 420 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 ITGAVP06756 1048 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 TMEM253P0C7T8 217 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 PCBP3P57721 371 aaKnown RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 ERVFC1P60507 584 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 CHRNEQ04844 493 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 HSP90AA2PQ14568 343 aaPredicted RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 AXDND1Q5T1B0 1012 aaPredicted RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 HEATR6Q6AI08 1181 aaKnown RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 LRRTM3Q86VH5 581 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 ZNF227Q86WZ6 799 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 ZNF512BQ96KM6 892 aaPredicted RBP4.02□□□□□ -1.77
HPS3-203ENST00000460822 FGD4Q96M96 766 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 APBA2Q99767 749 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 FBXL21Q9UKT6 434 aa4.02□□□□□ -1.77
HPS3-203ENST00000460822 RBAK-RBAKDNI3L0D1 243 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 TBX1O43435 398 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 SDSP20132 328 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 RPL10P27635 214 aaKnown RBP4.01□□□□□ -1.77
HPS3-203ENST00000460822 GRIA2P42262 883 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 MESP2Q0VG99 397 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 FNDC3BQ53EP0 1204 aaKnown RBP4.01□□□□□ -1.77
HPS3-203ENST00000460822 CNNM4Q6P4Q7 775 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 RNF111Q6ZNA4 994 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 ADAT2Q7Z6V5 191 aaKnown RBP4.01□□□□□ -1.77
HPS3-203ENST00000460822 SCUBE1Q8IWY4 988 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 AFAP1L2Q8N4X5 818 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 ANKS4BQ8N8V4 417 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 SYTL5Q8TDW5 730 aaPredicted RBP4.01□□□□□ -1.77
HPS3-203ENST00000460822 MKRN2Q9H000 416 aaKnown RBP4.01□□□□□ -1.77
HPS3-203ENST00000460822 KLHL25Q9H0H3 589 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 GABBR1Q9UBS5 961 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 MAPRE3Q9UPY8 281 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 EID1Q9Y6B2 187 aa4.01□□□□□ -1.77
HPS3-203ENST00000460822 SHISA3A0PJX4 238 aa4□□□□□ -1.77
HPS3-203ENST00000460822 ALG1L2C9J202 215 aa4□□□□□ -1.77
HPS3-203ENST00000460822 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4□□□□□ -1.77
HPS3-203ENST00000460822 ZGLP1P0C6A0 271 aa4□□□□□ -1.77
HPS3-203ENST00000460822 SLC14A2Q15849 920 aa4□□□□□ -1.77
HPS3-203ENST00000460822 NBPF12Q5TAG4 269 aaPredicted RBP4□□□□□ -1.77
HPS3-203ENST00000460822 WWC2Q6AWC2 1192 aa4□□□□□ -1.77
HPS3-203ENST00000460822 WAPLQ7Z5K2 1190 aa4□□□□□ -1.77
HPS3-203ENST00000460822 ANKLE2Q86XL3 938 aa4□□□□□ -1.77
HPS3-203ENST00000460822 RAVER1Q8IY67 606 aaKnown RBP4□□□□□ -1.77
HPS3-203ENST00000460822 CCDC144CPQ8IYA2 1237 aa4□□□□□ -1.77
HPS3-203ENST00000460822 DAGLBQ8NCG7 672 aa4□□□□□ -1.77
HPS3-203ENST00000460822 ATL2Q8NHH9 583 aa4□□□□□ -1.77
HPS3-203ENST00000460822 TOX2Q96NM4 488 aa4□□□□□ -1.77
HPS3-203ENST00000460822 SLC6A17Q9H1V8 727 aa4□□□□□ -1.77
HPS3-203ENST00000460822 SFMBT1Q9UHJ3 866 aa4□□□□□ -1.77
HPS3-203ENST00000460822 GPR160Q9UJ42 338 aa4□□□□□ -1.77
HPS3-203ENST00000460822 CCDC194A0A1B0GVG4 234 aa4□□□□□ -1.77
HPS3-203ENST00000460822 PABPC1P11940 636 aaKnown RBP4□□□□□ -1.77
HPS3-203ENST00000460822 TRHRP34981 398 aaPredicted RBP4□□□□□ -1.77
HPS3-203ENST00000460822 NBPF9Q3BBW0 867 aa4□□□□□ -1.77
HPS3-203ENST00000460822 NSMFQ6X4W1 530 aa4□□□□□ -1.77
HPS3-203ENST00000460822 ZNF655Q8N720 491 aaPredicted RBP4□□□□□ -1.77
HPS3-203ENST00000460822 ZNF513Q8N8E2 541 aaPredicted RBP4□□□□□ -1.77
HPS3-203ENST00000460822 ZSCAN18Q8TBC5 510 aaPredicted RBP4□□□□□ -1.77
HPS3-203ENST00000460822 SMARCC1Q92922 1105 aaPredicted RBP4□□□□□ -1.77
HPS3-203ENST00000460822 VWCEQ96DN2 955 aa4□□□□□ -1.77
HPS3-203ENST00000460822 TCTN2Q96GX1 697 aa4□□□□□ -1.77
HPS3-203ENST00000460822 MRPL4Q9BYD3 311 aaKnown RBP4□□□□□ -1.77
HPS3-203ENST00000460822 RNF32Q9H0A6 362 aa4□□□□□ -1.77
HPS3-203ENST00000460822 C19orf44Q9H6X5 657 aa4□□□□□ -1.77
HPS3-203ENST00000460822 INTS7Q9NVH2 962 aaKnown RBP4□□□□□ -1.77
HPS3-203ENST00000460822 MAGEC2Q9UBF1 373 aaPredicted RBP4□□□□□ -1.77
HPS3-203ENST00000460822 FAM83GA6ND36 823 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 PRODHO43272 600 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 ALDH1L1O75891 902 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 MAP4K4O95819 1239 aaPredicted RBP3.99□□□□□ -1.77
HPS3-203ENST00000460822 SYPP08247 313 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 FGFR1P11362 822 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 ENDOUP21128 410 aaKnown RBP3.99□□□□□ -1.77
HPS3-203ENST00000460822 PMLP29590 882 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 PDE6BP35913 854 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 TBX4P57082 545 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 SUMO1P63165 101 aaKnown RBP3.99□□□□□ -1.77
HPS3-203ENST00000460822 TEKQ02763 1124 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 SNX17Q15036 470 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 TMEM132EQ6IEE7 984 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 STRA8Q7Z7C7 330 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 CERS3Q8IU89 383 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 BVESQ8NE79 360 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 ADCY4Q8NFM4 1077 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 LEO1Q8WVC0 666 aaPredicted RBP3.99□□□□□ -1.77
HPS3-203ENST00000460822 KCNN1Q92952 543 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 TSR2Q969E8 191 aaKnown RBP3.99□□□□□ -1.77
HPS3-203ENST00000460822 FOXP3Q9BZS1 431 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 GBP3Q9H0R5 595 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 TCEAL9Q9UHQ7 104 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 TCFL5Q9UL49 500 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 PCDHB12Q9Y5F1 795 aa3.99□□□□□ -1.77
HPS3-203ENST00000460822 TCAF2A6NFQ2 919 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 PRRG2O14669 202 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 SHOXO15266 292 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms