RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 CCL23P55773 120 aa12.91□□□□□ -0.34
VAMP7-203ENST00000460621 MCMDC2Q4G0Z9 681 aa12.91□□□□□ -0.34
VAMP7-203ENST00000460621 RRP12Q5JTH9 1297 aaKnown RBP12.91□□□□□ -0.34
VAMP7-203ENST00000460621 SYDE2Q5VT97 1194 aa12.91□□□□□ -0.34
VAMP7-203ENST00000460621 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
VAMP7-203ENST00000460621 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
VAMP7-203ENST00000460621 HERVK_113Q902F9 699 aa12.91□□□□□ -0.34
VAMP7-203ENST00000460621 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
VAMP7-203ENST00000460621 SNHG28P0DPA3 235 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 TOP1P11387 765 aaKnown RBP12.9□□□□□ -0.34
VAMP7-203ENST00000460621 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
VAMP7-203ENST00000460621 DUSP28Q4G0W2 176 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 TMEM199Q8N511 208 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 TBC1D5Q92609 795 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 COPS5Q92905 334 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 SCLYQ96I15 445 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 AP5M1Q9H0R1 490 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 PRDM12Q9H4Q4 367 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 VTA1Q9NP79 307 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 TRMT13Q9NUP7 481 aaKnown RBP12.9□□□□□ -0.34
VAMP7-203ENST00000460621 Q9Y3F1 56 aa12.9□□□□□ -0.34
VAMP7-203ENST00000460621 CHD7Q9P2D1 2997 aa12.9□□□□□ -0.35
VAMP7-203ENST00000460621 TLR3O15455 904 aaKnown RBP12.89□□□□□ -0.35
VAMP7-203ENST00000460621 CYP2C9P11712 490 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 MYOGP15173 224 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 RABGGTBP53611 331 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 OTOP2Q7RTS6 562 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 LNPKQ9C0E8 428 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
VAMP7-203ENST00000460621 NKX2-4Q9H2Z4 354 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 TOMM22Q9NS69 142 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 MUC3AQ02505 3323 aa12.89□□□□□ -0.35
VAMP7-203ENST00000460621 NEDD4P46934 1319 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 CABYRO75952 493 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 ARIH2O95376 493 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 IGHDP01880 384 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 FGBP02675 491 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 GOLGA8HP0CJ92 632 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 EDNRBP24530 442 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 CALML3P27482 149 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 RPS6P62753 249 aaKnown RBP12.88□□□□□ -0.35
VAMP7-203ENST00000460621 PURAQ00577 322 aaKnown RBP12.88□□□□□ -0.35
VAMP7-203ENST00000460621 PPP4R3BQ5MIZ7 849 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 AKNAD1Q5T1N1 836 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 PSRC1Q6PGN9 363 aaPredicted RBP12.88□□□□□ -0.35
VAMP7-203ENST00000460621 UBA5Q9GZZ9 404 aa12.88□□□□□ -0.35
VAMP7-203ENST00000460621 GBF1Q92538 1859 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 PTPDC1A2A3K4 754 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 TTLL4Q14679 1199 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 PLEKHM2Q8IWE5 1019 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 PPM1EQ8WY54 764 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 CTAGE1Q96RT6 745 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 IL25Q9H293 177 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 COL20A1Q9P218 1284 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 ZMYM6O95789 1325 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
VAMP7-203ENST00000460621 SCN5AQ14524 2016 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 ARHGEF15O94989 841 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 MYL3P08590 195 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 SDSP20132 328 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 NBPF20Q3BBV1 942 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 B4GALNT3Q6L9W6 998 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 RNF207Q6ZRF8 634 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 SMC5Q8IY18 1101 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 TTC14Q96N46 770 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 SCN10AQ9Y5Y9 1956 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 TNKSO95271 1327 aa12.86□□□□□ -0.35
VAMP7-203ENST00000460621 TET1Q8NFU7 2136 aa12.85□□□□□ -0.35
VAMP7-203ENST00000460621 ZEB2O60315 1214 aa12.85□□□□□ -0.35
VAMP7-203ENST00000460621 GPNMBQ14956 572 aa12.85□□□□□ -0.35
VAMP7-203ENST00000460621 CCDC85BQ15834 202 aaPredicted RBP12.85□□□□□ -0.35
VAMP7-203ENST00000460621 CCDC62Q6P9F0 684 aa12.85□□□□□ -0.35
VAMP7-203ENST00000460621 MFSD6Q6ZSS7 791 aa12.85□□□□□ -0.35
VAMP7-203ENST00000460621 OR6J1Q8NGC5 347 aa12.85□□□□□ -0.35
VAMP7-203ENST00000460621 RILPL2Q969X0 211 aa12.85□□□□□ -0.35
VAMP7-203ENST00000460621 TAAR1Q96RJ0 339 aa12.85□□□□□ -0.35
VAMP7-203ENST00000460621 ADD3Q9UEY8 706 aaKnown RBP12.85□□□□□ -0.35
VAMP7-203ENST00000460621 WDR19Q8NEZ3 1342 aa12.85□□□□□ -0.35
VAMP7-203ENST00000460621 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 A6NJR5 290 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 TRIM6-TRIM34B2RNG4 842 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 RFXAPO00287 272 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 USH1GQ495M9 461 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 SPRED2Q7Z698 418 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 DEFB128Q7Z7B8 93 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 POLR3EQ9NVU0 708 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 REV3LO60673 3130 aa12.84□□□□□ -0.35
VAMP7-203ENST00000460621 LOC102724159A0A0B4J2E5 919 aa12.83□□□□□ -0.36
VAMP7-203ENST00000460621 B4E1Z4 1266 aa12.83□□□□□ -0.36
VAMP7-203ENST00000460621 OPLAHO14841 1288 aa12.83□□□□□ -0.36
VAMP7-203ENST00000460621 KDM4AO75164 1064 aa12.83□□□□□ -0.36
VAMP7-203ENST00000460621 PDE4DQ08499 809 aa12.83□□□□□ -0.36
VAMP7-203ENST00000460621 PWP2Q15269 919 aaKnown RBP12.83□□□□□ -0.36
VAMP7-203ENST00000460621 RAB30Q15771 203 aa12.83□□□□□ -0.36
VAMP7-203ENST00000460621 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms