RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 NSMFQ6X4W1 530 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 KIAA1211Q6ZU35 1233 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 ZNF589Q86UQ0 364 aaPredicted RBP13.43□□□□□ -0.26
LSG1-204ENST00000460584 DGKHQ86XP1 1220 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 SYMPKQ92797 1274 aaKnown RBP13.43□□□□□ -0.26
LSG1-204ENST00000460584 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
LSG1-204ENST00000460584 MTIF3Q9H2K0 278 aaKnown RBP13.43□□□□□ -0.26
LSG1-204ENST00000460584 SPTBN5Q9NRC6 3674 aaKnown RBP13.43□□□□□ -0.26
LSG1-204ENST00000460584 POLR3EQ9NVU0 708 aa13.43□□□□□ -0.26
LSG1-204ENST00000460584 A6NJR5 290 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 B4GALT4O60513 344 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 KPNA6O60684 536 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 FGBP02675 491 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 PFKMP08237 780 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 SUPT20HL2P0C7V6 817 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 SLC16A2P36021 539 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 MFAP1P55081 439 aaKnown RBP13.42□□□□□ -0.26
LSG1-204ENST00000460584 PURAQ00577 322 aaKnown RBP13.42□□□□□ -0.26
LSG1-204ENST00000460584 NMIQ13287 307 aaPredicted RBP13.42□□□□□ -0.26
LSG1-204ENST00000460584 GPATCH4Q5T3I0 446 aaKnown RBP13.42□□□□□ -0.26
LSG1-204ENST00000460584 NOL8Q76FK4 1167 aaKnown RBP13.42□□□□□ -0.26
LSG1-204ENST00000460584 PURBQ96QR8 312 aaKnown RBP13.42□□□□□ -0.26
LSG1-204ENST00000460584 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 WDR11Q9BZH6 1224 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 PPP1R12CQ9BZL4 782 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 WNT8AQ9H1J5 351 aa13.42□□□□□ -0.26
LSG1-204ENST00000460584 RNF41Q9H4P4 317 aaPredicted RBP13.42□□□□□ -0.26
LSG1-204ENST00000460584 ISY1Q9ULR0 285 aaKnown RBP13.42□□□□□ -0.26
LSG1-204ENST00000460584 ACRP10323 421 aa13.41□□□□□ -0.26
LSG1-204ENST00000460584 PTGS1P23219 599 aa13.41□□□□□ -0.26
LSG1-204ENST00000460584 PBX2P40425 430 aa13.41□□□□□ -0.26
LSG1-204ENST00000460584 CPT1AP50416 773 aa13.41□□□□□ -0.26
LSG1-204ENST00000460584 PTPN11Q06124 597 aaPredicted RBP13.41□□□□□ -0.26
LSG1-204ENST00000460584 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
LSG1-204ENST00000460584 MFSD6Q6ZSS7 791 aa13.41□□□□□ -0.26
LSG1-204ENST00000460584 RPUSD2Q8IZ73 545 aaKnown RBP13.41□□□□□ -0.26
LSG1-204ENST00000460584 TRPV6Q9H1D0 765 aa13.41□□□□□ -0.26
LSG1-204ENST00000460584 CXXC1Q9P0U4 656 aaPredicted RBP13.41□□□□□ -0.26
LSG1-204ENST00000460584 DDX49Q9Y6V7 483 aaKnown RBP13.41□□□□□ -0.26
LSG1-204ENST00000460584 UMODL1Q5DID0 1318 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 SCN10AQ9Y5Y9 1956 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 RPS6P62753 249 aaKnown RBP13.4□□□□□ -0.26
LSG1-204ENST00000460584 NFRKBQ6P4R8 1299 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 SLC30A10Q6XR72 485 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 RNF207Q6ZRF8 634 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 EEPD1Q7L9B9 569 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 TBC1D10CQ8IV04 446 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 SCFD2Q8WU76 684 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 ESR2Q92731 530 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 MPHOSPH6Q99547 160 aaKnown RBP13.4□□□□□ -0.26
LSG1-204ENST00000460584 MTG1Q9BT17 334 aaPredicted RBP13.4□□□□□ -0.26
LSG1-204ENST00000460584 GPCPD1Q9NPB8 672 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 MSRAQ9UJ68 235 aa13.4□□□□□ -0.26
LSG1-204ENST00000460584 FRMPD2Q68DX3 1309 aaPredicted RBP13.39□□□□□ -0.27
LSG1-204ENST00000460584 EYSQ5T1H1 3165 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 GRXCR1A8MXD5 290 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 B4DLN1 442 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 SDSP20132 328 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 RFC2P35250 354 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 MRPL12P52815 198 aaKnown RBP13.39□□□□□ -0.27
LSG1-204ENST00000460584 PSMC6P62333 389 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 GHRHRQ02643 423 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 TJAP1Q5JTD0 557 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 RRP12Q5JTH9 1297 aaKnown RBP13.39□□□□□ -0.27
LSG1-204ENST00000460584 CCDC62Q6P9F0 684 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 PLEKHM2Q8IWE5 1019 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 USP38Q8NB14 1042 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 GAS2L1Q99501 681 aaPredicted RBP13.39□□□□□ -0.27
LSG1-204ENST00000460584 TNKSO95271 1327 aa13.39□□□□□ -0.27
LSG1-204ENST00000460584 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
LSG1-204ENST00000460584 POU3F3P20264 500 aaPredicted RBP13.38□□□□□ -0.27
LSG1-204ENST00000460584 NUCB1Q02818 461 aa13.38□□□□□ -0.27
LSG1-204ENST00000460584 BRDTQ58F21 947 aaPredicted RBP13.38□□□□□ -0.27
LSG1-204ENST00000460584 SESTD1Q86VW0 696 aa13.38□□□□□ -0.27
LSG1-204ENST00000460584 ATXN2LQ8WWM7 1075 aaKnown RBP13.38□□□□□ -0.27
LSG1-204ENST00000460584 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
LSG1-204ENST00000460584 DSCC1Q9BVC3 393 aa13.38□□□□□ -0.27
LSG1-204ENST00000460584 TOMM22Q9NS69 142 aa13.38□□□□□ -0.27
LSG1-204ENST00000460584 YBX2Q9Y2T7 364 aaKnown RBP13.38□□□□□ -0.27
LSG1-204ENST00000460584 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
LSG1-204ENST00000460584 NEDD4P46934 1319 aa13.38□□□□□ -0.27
LSG1-204ENST00000460584 RAD50Q92878 1312 aa13.38□□□□□ -0.27
LSG1-204ENST00000460584 CALML3P27482 149 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 CCL23P55773 120 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 HAND2P61296 217 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 PDE4DQ08499 809 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 RBL2Q08999 1139 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 ADGRE1Q14246 886 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 PPP2R5BQ15173 497 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 CHD1LQ86WJ1 897 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 OR6J1Q8NGC5 347 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 PHOSPHO2Q8TCD6 241 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 IWS1Q96ST2 819 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 RWDD1Q9H446 243 aaPredicted RBP13.37□□□□□ -0.27
LSG1-204ENST00000460584 TRMT13Q9NUP7 481 aaKnown RBP13.37□□□□□ -0.27
LSG1-204ENST00000460584 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
LSG1-204ENST00000460584 SLC4A7Q9Y6M7 1214 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms