RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
UPF2-204ENST00000460569 CD99L2Q8TCZ2 262 aa11.68□□□□□ -0.54
UPF2-204ENST00000460569 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
UPF2-204ENST00000460569 ZNF296Q8WUU4 475 aaPredicted RBP11.68□□□□□ -0.54
UPF2-204ENST00000460569 TBC1D5Q92609 795 aa11.68□□□□□ -0.54
UPF2-204ENST00000460569 ERO1AQ96HE7 468 aa11.68□□□□□ -0.54
UPF2-204ENST00000460569 PHF20Q9BVI0 1012 aa11.68□□□□□ -0.54
UPF2-204ENST00000460569 ZMYND12Q9H0C1 365 aa11.68□□□□□ -0.54
UPF2-204ENST00000460569 GLT8D2Q9H1C3 349 aa11.68□□□□□ -0.54
UPF2-204ENST00000460569 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
UPF2-204ENST00000460569 RIC8AQ9NPQ8 531 aa11.68□□□□□ -0.54
UPF2-204ENST00000460569 CASP8AP2Q9UKL3 1982 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 LRRC37A2A6NM11 1700 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 VPS37CA5D8V6 355 aaPredicted RBP11.67□□□□□ -0.54
UPF2-204ENST00000460569 SLC15A5A6NIM6 579 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 FOXN1O15353 648 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 STRNO43815 780 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 MMP1P03956 469 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 PTPREP23469 700 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 ADORA2AP29274 412 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 CTGFP29279 349 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 HOXA13P31271 388 aaPredicted RBP11.67□□□□□ -0.54
UPF2-204ENST00000460569 KRT2P35908 639 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 HSD17B4P51659 736 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 RPS6P62753 249 aaKnown RBP11.67□□□□□ -0.54
UPF2-204ENST00000460569 BAATQ14032 418 aaPredicted RBP11.67□□□□□ -0.54
UPF2-204ENST00000460569 SAFBQ15424 915 aaKnown RBP eCLIP11.67□□□□□ -0.54
UPF2-204ENST00000460569 GALNT17Q6IS24 598 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 USP17L6PQ6QN14 398 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 BLIDQ8IZY5 108 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 REXO1Q8N1G1 1221 aaKnown RBP11.67□□□□□ -0.54
UPF2-204ENST00000460569 DAGLBQ8NCG7 672 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 FBXO18Q8NFZ0 1043 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 CYP39A1Q9NYL5 469 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
UPF2-204ENST00000460569 SPDYE3A6NKU9 549 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 PIK3CDO00329 1044 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 MEIS2O14770 477 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 ADAMTS3O15072 1205 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 PGK2P07205 417 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 HSPA8P11142 646 aaKnown RBP11.66□□□□□ -0.54
UPF2-204ENST00000460569 SYT1P21579 422 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 GHRHRQ02643 423 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 GNL2Q13823 731 aaKnown RBP11.66□□□□□ -0.54
UPF2-204ENST00000460569 GRB14Q14449 540 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 NPY5RQ15761 445 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 JAKMIP3Q5VZ66 844 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 FCHSD1Q86WN1 690 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 DIS3L2Q8IYB7 885 aaKnown RBP11.66□□□□□ -0.54
UPF2-204ENST00000460569 ABRAQ8N0Z2 381 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 SAMD3Q8N6K7 520 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 RASGRP4Q8TDF6 673 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 SYTL5Q8TDW5 730 aaPredicted RBP11.66□□□□□ -0.54
UPF2-204ENST00000460569 SOCS4Q8WXH5 440 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 IPO9Q96P70 1041 aaKnown RBP11.66□□□□□ -0.54
UPF2-204ENST00000460569 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 TMEM260Q9NX78 707 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 MAP3K20Q9NYL2 800 aaKnown RBP11.66□□□□□ -0.54
UPF2-204ENST00000460569 COL20A1Q9P218 1284 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 BIN2Q9UBW5 565 aaPredicted RBP11.66□□□□□ -0.54
UPF2-204ENST00000460569 MYH7BA7E2Y1 1941 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 MYH15Q9Y2K3 1946 aa11.66□□□□□ -0.54
UPF2-204ENST00000460569 MCM3APO60318 1980 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 CEP350Q5VT06 3117 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 CAP1Q01518 475 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 CNTN2Q02246 1040 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 AP3B2Q13367 1082 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 ARHGEF6Q15052 776 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 MORN1Q5T089 497 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 MCTP1Q6DN14 999 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 DPP9Q86TI2 863 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 PGBD1Q96JS3 809 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 PURBQ96QR8 312 aaKnown RBP11.65□□□□□ -0.54
UPF2-204ENST00000460569 ANO3Q9BYT9 981 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 MAF1Q9H063 256 aa11.65□□□□□ -0.54
UPF2-204ENST00000460569 DNAJC25-GNG10A0A024R161 153 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 CCDC194A0A1B0GVG4 234 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 BTBD18B2RXH4 712 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 STX6O43752 255 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 COBLO75128 1261 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 HOXD10P28358 340 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 RGS2P41220 211 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
UPF2-204ENST00000460569 CLK2P49760 499 aaKnown RBP11.64□□□□□ -0.55
UPF2-204ENST00000460569 PRKCZQ05513 592 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 MAP2K5Q13163 448 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 NR5A1Q13285 461 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 MCTP2Q6DN12 878 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 FAM133AQ8N9E0 248 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 TAAR1Q96RJ0 339 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 RMDN3Q96TC7 470 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 APBA2Q99767 749 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 EHMT1Q9H9B1 1298 aa11.64□□□□□ -0.55
UPF2-204ENST00000460569 SLC5A4Q9NY91 659 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms