RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 ZC3H12DA2A288 527 aaKnown RBP5.92□□□□□ -1.46
TTC3-211ENST00000460328 LIMS1P48059 325 aa5.92□□□□□ -1.46
TTC3-211ENST00000460328 SEPHS1P49903 392 aa5.92□□□□□ -1.46
TTC3-211ENST00000460328 GRB10Q13322 594 aa5.92□□□□□ -1.46
TTC3-211ENST00000460328 NLGN2Q8NFZ4 835 aa5.92□□□□□ -1.46
TTC3-211ENST00000460328 ANAPC16Q96DE5 110 aa5.92□□□□□ -1.46
TTC3-211ENST00000460328 RCC1LQ96I51 464 aaKnown RBP5.92□□□□□ -1.46
TTC3-211ENST00000460328 DBR1Q9UK59 544 aaKnown RBP5.92□□□□□ -1.46
TTC3-211ENST00000460328 RWDD3Q9Y3V2 267 aa5.92□□□□□ -1.46
TTC3-211ENST00000460328 IRS2Q9Y4H2 1338 aa5.92□□□□□ -1.46
TTC3-211ENST00000460328 A0A0G2JLL6 359 aaPredicted RBP5.91□□□□□ -1.46
TTC3-211ENST00000460328 C2orf71A6NGG8 1288 aa5.91□□□□□ -1.46
TTC3-211ENST00000460328 F8W031 263 aaPredicted RBP5.91□□□□□ -1.46
TTC3-211ENST00000460328 PFKLP17858 780 aa5.91□□□□□ -1.46
TTC3-211ENST00000460328 IGFBP6P24592 240 aaPredicted RBP5.91□□□□□ -1.46
TTC3-211ENST00000460328 CPNE8Q86YQ8 564 aa5.91□□□□□ -1.46
TTC3-211ENST00000460328 ZNF513Q8N8E2 541 aaPredicted RBP5.91□□□□□ -1.46
TTC3-211ENST00000460328 PWWP2AQ96N64 755 aa5.91□□□□□ -1.46
TTC3-211ENST00000460328 RXFP1Q9HBX9 757 aa5.91□□□□□ -1.46
TTC3-211ENST00000460328 STRIP2Q9ULQ0 834 aa5.91□□□□□ -1.46
TTC3-211ENST00000460328 ANKRD34BA5PLL1 514 aa5.9□□□□□ -1.46
TTC3-211ENST00000460328 GLI4P10075 376 aa5.9□□□□□ -1.46
TTC3-211ENST00000460328 PAMP19021 973 aa5.9□□□□□ -1.46
TTC3-211ENST00000460328 FBLN1P23142 703 aa5.9□□□□□ -1.46
TTC3-211ENST00000460328 BUD31P41223 144 aaPredicted RBP5.9□□□□□ -1.46
TTC3-211ENST00000460328 PRR5P85299 388 aa5.9□□□□□ -1.46
TTC3-211ENST00000460328 CABP7Q86V35 215 aa5.9□□□□□ -1.46
TTC3-211ENST00000460328 GULP1Q9UBP9 304 aa5.9□□□□□ -1.46
TTC3-211ENST00000460328 FBLN5Q9UBX5 448 aa5.9□□□□□ -1.46
TTC3-211ENST00000460328 AKT3Q9Y243 479 aa5.9□□□□□ -1.46
TTC3-211ENST00000460328 SASH1O94885 1247 aa5.89□□□□□ -1.47
TTC3-211ENST00000460328 KCNH1O95259 989 aa5.89□□□□□ -1.47
TTC3-211ENST00000460328 ATF4P18848 351 aaPredicted RBP5.89□□□□□ -1.47
TTC3-211ENST00000460328 LZTR1Q8N653 840 aa5.89□□□□□ -1.47
TTC3-211ENST00000460328 FEZF2Q8TBJ5 459 aa5.89□□□□□ -1.47
TTC3-211ENST00000460328 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 OTOL1A6NHN0 477 aaPredicted RBP5.88□□□□□ -1.47
TTC3-211ENST00000460328 PPP1R11O60927 126 aaPredicted RBP5.88□□□□□ -1.47
TTC3-211ENST00000460328 ATF2P15336 505 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 SCRN1Q12765 414 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 TARBP2Q15633 366 aaKnown RBP5.88□□□□□ -1.47
TTC3-211ENST00000460328 LINC01356Q8N9X3 169 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 ALG3Q92685 438 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 PPP1R14AQ96A00 147 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 APBA2Q99767 749 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 XYLT2Q9H1B5 865 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 BCAS3Q9H6U6 928 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 EMC9Q9Y3B6 208 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 MRVI1Q9Y6F6 885 aa5.88□□□□□ -1.47
TTC3-211ENST00000460328 SMAD7O15105 426 aaKnown RBP5.87□□□□□ -1.47
TTC3-211ENST00000460328 NAT2P11245 290 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 MC3RP41968 323 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 FOXO4P98177 505 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 POMZP3Q6PJE2 187 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 SP8Q8IXZ3 490 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 ZDHHC14Q8IZN3 488 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 CRACR2BQ8N4Y2 399 aaPredicted RBP5.87□□□□□ -1.47
TTC3-211ENST00000460328 TP53I13Q8NBR0 393 aaPredicted RBP5.87□□□□□ -1.47
TTC3-211ENST00000460328 SYT8Q8NBV8 401 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 BVESQ8NE79 360 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 RELTQ969Z4 430 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 MTA3Q9BTC8 594 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 LGR4Q9BXB1 951 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 CAPN10Q9HC96 672 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 CLEC1BQ9P126 229 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 FAN1Q9Y2M0 1017 aa5.87□□□□□ -1.47
TTC3-211ENST00000460328 TRBV23OR9-2A0A075B6M9 112 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 C7orf72A4D263 438 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 NOP56O00567 594 aaKnown RBP5.86□□□□□ -1.47
TTC3-211ENST00000460328 FFAR3O14843 346 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 NPHS1O60500 1241 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
TTC3-211ENST00000460328 ASGR2P07307 311 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 NCAM1P13591 858 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 PLS3P13797 630 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 ERCC5P28715 1186 aaPredicted RBP5.86□□□□□ -1.47
TTC3-211ENST00000460328 ZNF143P52747 638 aaPredicted RBP5.86□□□□□ -1.47
TTC3-211ENST00000460328 NFIXQ14938 502 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 NCAPHQ15003 741 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 TRIM59Q8IWR1 403 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 NLGN1Q8N2Q7 840 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 NETO2Q8NC67 525 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 USP33Q8TEY7 942 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 COPS5Q92905 334 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 RNF38Q9H0F5 515 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 GPRC5CQ9NQ84 441 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 RTEL1Q9NZ71 1219 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 PMF1-BGLAPU3KQ54 211 aa5.86□□□□□ -1.47
TTC3-211ENST00000460328 SSBP05455 408 aaKnown RBP eCLIP5.85□□□□□ -1.47
TTC3-211ENST00000460328 PMLP29590 882 aa5.85□□□□□ -1.47
TTC3-211ENST00000460328 VWA3BQ502W6 1294 aa5.85□□□□□ -1.47
TTC3-211ENST00000460328 LARP1BQ659C4 914 aaKnown RBP5.85□□□□□ -1.47
TTC3-211ENST00000460328 MBLAC2Q68D91 279 aa5.85□□□□□ -1.47
TTC3-211ENST00000460328 WWC2Q6AWC2 1192 aa5.85□□□□□ -1.47
TTC3-211ENST00000460328 GTF2IRD2BQ6EKJ0 949 aa5.85□□□□□ -1.47
TTC3-211ENST00000460328 C6orf15Q6UXA7 325 aaPredicted RBP5.85□□□□□ -1.47
TTC3-211ENST00000460328 GTF2IRD2Q86UP8 949 aa5.85□□□□□ -1.47
TTC3-211ENST00000460328 FNIP1Q8TF40 1166 aa5.85□□□□□ -1.47
TTC3-211ENST00000460328 TSPAN17Q96FV3 270 aa5.85□□□□□ -1.47
TTC3-211ENST00000460328 PEX11GQ96HA9 241 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms