RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 KRIT1O00522 736 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 USP17L1Q7RTZ2 530 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 ACRBPQ8NEB7 543 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 BPIFA3Q9BQP9 254 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 DIP2CQ9Y2E4 1556 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 PXDNLA1KZ92 1463 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 RCAN1P53805 252 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 GJA10Q969M2 543 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 PPP2R5EQ16537 467 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 RABGAP1Q9Y3P9 1069 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 CDC27P30260 824 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 EXOSC10Q01780 885 aaKnown RBP16.24■□□□□ 0.19
PTPRU-205ENST00000460170 RASSF7Q02833 373 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 OTUD6AQ7L8S5 288 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 THAP9Q9H5L6 903 aa16.24■□□□□ 0.19
PTPRU-205ENST00000460170 PLCG1P19174 1290 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 SCARF1Q14162 830 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 DCUN1D2Q6PH85 259 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 COA7Q96BR5 231 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 PPEF1O14829 653 aaPredicted RBP16.23■□□□□ 0.19
PTPRU-205ENST00000460170 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
PTPRU-205ENST00000460170 NR2F2P24468 414 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 ZBED6P86452 979 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 PABPC4Q13310 644 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTPRU-205ENST00000460170 LRRC41Q15345 812 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
PTPRU-205ENST00000460170 TAOK1Q7L7X3 1001 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 CABS1Q96KC9 395 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 PDE11AQ9HCR9 933 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 DISC1Q9NRI5 854 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 N4BP1O75113 896 aaKnown RBP16.23■□□□□ 0.19
PTPRU-205ENST00000460170 ALAS1P13196 640 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 KCTD1Q719H9 257 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 FAM71BQ8TC56 605 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 TEKT3Q9BXF9 490 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTPRU-205ENST00000460170 TXNDC16Q9P2K2 825 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 USTQ9Y2C2 406 aa16.23■□□□□ 0.19
PTPRU-205ENST00000460170 SEC31AO94979 1220 aaKnown RBP16.22■□□□□ 0.19
PTPRU-205ENST00000460170 TNNI1P19237 187 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 ALDH3A1P30838 453 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 MAIP1Q8WWC4 291 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 KANSL2Q9H9L4 492 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 FEZ2Q9UHY8 353 aaPredicted RBP16.22■□□□□ 0.19
PTPRU-205ENST00000460170 THRAP3Q9Y2W1 955 aaKnown RBP16.22■□□□□ 0.19
PTPRU-205ENST00000460170 BZW2Q9Y6E2 419 aaKnown RBP16.22■□□□□ 0.19
PTPRU-205ENST00000460170 TCP10L2B9ZVM9 353 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 K7ENM7 598 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 NOP56O00567 594 aaKnown RBP16.22■□□□□ 0.19
PTPRU-205ENST00000460170 CTNNA1P35221 906 aaKnown RBP16.22■□□□□ 0.19
PTPRU-205ENST00000460170 KRT31Q15323 416 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 KRT26Q7Z3Y9 468 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 FAM184BQ9ULE4 1060 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 SLC16A2P36021 539 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 EHHADHQ08426 723 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 GRAPQ13588 217 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 KMT5BQ4FZB7 885 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 GRAPLQ8TC17 118 aaPredicted RBP16.22■□□□□ 0.19
PTPRU-205ENST00000460170 SH3GLB2Q9NR46 395 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 PARP2Q9UGN5 583 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 TNS3Q68CZ2 1445 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 GAS8O95995 478 aa16.22■□□□□ 0.19
PTPRU-205ENST00000460170 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
PTPRU-205ENST00000460170 TESPA1A2RU30 521 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-205ENST00000460170 CCDC151A5D8V7 595 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 PTPROQ16827 1216 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 CEP85LQ5SZL2 805 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 INTS8Q75QN2 995 aaKnown RBP16.21■□□□□ 0.19
PTPRU-205ENST00000460170 CCDC170Q8IYT3 715 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 ENAHQ8N8S7 591 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-205ENST00000460170 SMC6Q96SB8 1091 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 MINPP1Q9UNW1 487 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 UBN2Q6ZU65 1347 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 NDUFA10O95299 355 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 CDK8P49336 464 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 MAP3K9P80192 1104 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 CCDC144BQ3MJ40 725 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 TCP11X2Q5H9J9 407 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 DENND2CQ68D51 928 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 CDAN1Q8IWY9 1227 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 AZI2Q9H6S1 392 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 PLCB1Q9NQ66 1216 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 ZNF335Q9H4Z2 1342 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-205ENST00000460170 GSG1L2A8MUP6 293 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 GOLGA8KD6RF30 607 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 ARHGAP25P42331 645 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 TNFAIP1Q13829 316 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 FAM102BQ5T8I3 360 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 APBB1IPQ7Z5R6 666 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-205ENST00000460170 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 FAM170AA1A519 330 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 MFAP3LO75121 409 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 ODR4Q5SWX8 454 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 TMED8Q6PL24 325 aaPredicted RBP16.21■□□□□ 0.19
PTPRU-205ENST00000460170 COMMD10Q9Y6G5 202 aa16.21■□□□□ 0.19
PTPRU-205ENST00000460170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.18
PTPRU-205ENST00000460170 PRDX5P30044 214 aa16.21■□□□□ 0.18
PTPRU-205ENST00000460170 PPARDQ03181 441 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms