RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SMAD3P84022 425 aaKnown RBP26.68■■□□□ 1.86
PTPN4-207ENST00000460162 ZNF697Q5TEC3 545 aa26.68■■□□□ 1.86
PTPN4-207ENST00000460162 RNPC3Q96LT9 517 aaKnown RBP26.68■■□□□ 1.86
PTPN4-207ENST00000460162 MPHOSPH6Q99547 160 aaKnown RBP26.68■■□□□ 1.86
PTPN4-207ENST00000460162 TNKSO95271 1327 aa26.67■■□□□ 1.86
PTPN4-207ENST00000460162 TLR3O15455 904 aaKnown RBP26.67■■□□□ 1.86
PTPN4-207ENST00000460162 GOLGA8HP0CJ92 632 aa26.67■■□□□ 1.86
PTPN4-207ENST00000460162 GSPT1P15170 499 aaKnown RBP26.67■■□□□ 1.86
PTPN4-207ENST00000460162 EPHB4P54760 987 aa26.67■■□□□ 1.86
PTPN4-207ENST00000460162 RPS6P62753 249 aaKnown RBP26.67■■□□□ 1.86
PTPN4-207ENST00000460162 ASPRV1Q53RT3 343 aa26.67■■□□□ 1.86
PTPN4-207ENST00000460162 CXCL17Q6UXB2 119 aa26.67■■□□□ 1.86
PTPN4-207ENST00000460162 ENAHQ8N8S7 591 aaPredicted RBP26.67■■□□□ 1.86
PTPN4-207ENST00000460162 IL25Q9H293 177 aa26.67■■□□□ 1.86
PTPN4-207ENST00000460162 DYNC1LI2O43237 492 aaPredicted RBP26.66■■□□□ 1.86
PTPN4-207ENST00000460162 CALML3P27482 149 aa26.66■■□□□ 1.86
PTPN4-207ENST00000460162 DUSP28Q4G0W2 176 aa26.66■■□□□ 1.86
PTPN4-207ENST00000460162 KIAA1211Q6ZU35 1233 aa26.66■■□□□ 1.86
PTPN4-207ENST00000460162 SLC43A3Q8NBI5 491 aa26.66■■□□□ 1.86
PTPN4-207ENST00000460162 DNERQ8NFT8 737 aa26.66■■□□□ 1.86
PTPN4-207ENST00000460162 SEZ6LQ9BYH1 1024 aa26.66■■□□□ 1.86
PTPN4-207ENST00000460162 MAF1Q9H063 256 aa26.66■■□□□ 1.86
PTPN4-207ENST00000460162 CDC37Q16543 378 aaPredicted RBP26.65■■□□□ 1.86
PTPN4-207ENST00000460162 MFSD5Q6N075 450 aa26.65■■□□□ 1.86
PTPN4-207ENST00000460162 UBAC1Q9BSL1 405 aa26.65■■□□□ 1.86
PTPN4-207ENST00000460162 ZSWIM5Q9P217 1185 aa26.65■■□□□ 1.86
PTPN4-207ENST00000460162 RBM47A0AV96 593 aaKnown RBP26.64■■□□□ 1.86
PTPN4-207ENST00000460162 PTGS1P23219 599 aa26.64■■□□□ 1.86
PTPN4-207ENST00000460162 EDNRBP24530 442 aa26.64■■□□□ 1.86
PTPN4-207ENST00000460162 USH1GQ495M9 461 aa26.64■■□□□ 1.86
PTPN4-207ENST00000460162 RGS22Q8NE09 1264 aa26.64■■□□□ 1.86
PTPN4-207ENST00000460162 GUCD1Q96NT3 240 aa26.64■■□□□ 1.86
PTPN4-207ENST00000460162 ABCB11O95342 1321 aa26.64■■□□□ 1.85
PTPN4-207ENST00000460162 CD4P01730 458 aa26.63■■□□□ 1.85
PTPN4-207ENST00000460162 PDE4DQ08499 809 aa26.63■■□□□ 1.85
PTPN4-207ENST00000460162 PPIGQ13427 754 aaKnown RBP eCLIP26.63■■□□□ 1.851e-6■■■□□ 17
PTPN4-207ENST00000460162 SLC17A8Q8NDX2 589 aa26.63■■□□□ 1.85
PTPN4-207ENST00000460162 WDR11Q9BZH6 1224 aa26.63■■□□□ 1.85
PTPN4-207ENST00000460162 UBA5Q9GZZ9 404 aa26.63■■□□□ 1.85
PTPN4-207ENST00000460162 CPVLQ9H3G5 476 aa26.63■■□□□ 1.85
PTPN4-207ENST00000460162 B4DLN1 442 aa26.62■■□□□ 1.85
PTPN4-207ENST00000460162 PARP1P09874 1014 aaKnown RBP26.62■■□□□ 1.85
PTPN4-207ENST00000460162 MRPL12P52815 198 aaKnown RBP26.62■■□□□ 1.85
PTPN4-207ENST00000460162 ITGA7Q13683 1181 aa26.62■■□□□ 1.85
PTPN4-207ENST00000460162 TMEM63BQ5T3F8 832 aa26.62■■□□□ 1.85
PTPN4-207ENST00000460162 RUFY2Q8WXA3 655 aa26.62■■□□□ 1.85
PTPN4-207ENST00000460162 CPT1AP50416 773 aa26.61■■□□□ 1.85
PTPN4-207ENST00000460162 ADGRF4Q8IZF3 695 aa26.61■■□□□ 1.85
PTPN4-207ENST00000460162 TMEM199Q8N511 208 aa26.61■■□□□ 1.85
PTPN4-207ENST00000460162 TMEM265A0A087WTH1 108 aa26.6■■□□□ 1.85
PTPN4-207ENST00000460162 NKRFO15226 690 aaKnown RBP eCLIP26.6■■□□□ 1.85
PTPN4-207ENST00000460162 PPP2R5BQ15173 497 aa26.6■■□□□ 1.85
PTPN4-207ENST00000460162 IFIT1BQ5T764 474 aaKnown RBP26.6■■□□□ 1.85
PTPN4-207ENST00000460162 SCFD2Q8WU76 684 aa26.6■■□□□ 1.85
PTPN4-207ENST00000460162 FAM161BQ96MY7 647 aa26.6■■□□□ 1.85
PTPN4-207ENST00000460162 PPP1R12CQ9BZL4 782 aa26.6■■□□□ 1.85
PTPN4-207ENST00000460162 POLR3EQ9NVU0 708 aa26.6■■□□□ 1.85
PTPN4-207ENST00000460162 GRIN2DO15399 1336 aa26.6■■□□□ 1.85
PTPN4-207ENST00000460162 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.59■■□□□ 1.85
PTPN4-207ENST00000460162 SCN10AQ9Y5Y9 1956 aa26.58■■□□□ 1.85
PTPN4-207ENST00000460162 DHX16O60231 1041 aaKnown RBP26.58■■□□□ 1.85
PTPN4-207ENST00000460162 SEC23AQ15436 765 aa26.58■■□□□ 1.85
PTPN4-207ENST00000460162 QRICH1Q2TAL8 776 aa26.58■■□□□ 1.85
PTPN4-207ENST00000460162 PSRC1Q6PGN9 363 aaPredicted RBP26.58■■□□□ 1.85
PTPN4-207ENST00000460162 MCF2L2Q86YR7 1114 aa26.58■■□□□ 1.85
PTPN4-207ENST00000460162 OR6J1Q8NGC5 347 aa26.58■■□□□ 1.85
PTPN4-207ENST00000460162 KIAA1217Q5T5P2 1943 aa26.58■■□□□ 1.85
PTPN4-207ENST00000460162 CSF2RAP15509 400 aa26.57■■□□□ 1.84
PTPN4-207ENST00000460162 CHMLP26374 656 aa26.57■■□□□ 1.84
PTPN4-207ENST00000460162 PSMC6P62333 389 aa26.57■■□□□ 1.84
PTPN4-207ENST00000460162 PURAQ00577 322 aaKnown RBP26.57■■□□□ 1.84
PTPN4-207ENST00000460162 TRDNQ13061 729 aa26.57■■□□□ 1.84
PTPN4-207ENST00000460162 BRDTQ58F21 947 aaPredicted RBP26.57■■□□□ 1.84
PTPN4-207ENST00000460162 HIPK3Q9H422 1215 aa26.57■■□□□ 1.84
PTPN4-207ENST00000460162 JMJD4Q9H9V9 463 aa26.57■■□□□ 1.84
PTPN4-207ENST00000460162 U3KPZ7 1027 aaPredicted RBP26.57■■□□□ 1.84
PTPN4-207ENST00000460162 CYB5R4Q7L1T6 521 aa26.56■■□□□ 1.84
PTPN4-207ENST00000460162 FBXO11Q86XK2 927 aa26.56■■□□□ 1.84
PTPN4-207ENST00000460162 TTYH1Q9H313 450 aaPredicted RBP26.56■■□□□ 1.84
PTPN4-207ENST00000460162 SEMA6BQ9H3T3 888 aa26.56■■□□□ 1.84
PTPN4-207ENST00000460162 MRPL11Q9Y3B7 192 aaKnown RBP26.56■■□□□ 1.84
PTPN4-207ENST00000460162 CDH23Q9H251 3354 aa26.56■■□□□ 1.84
PTPN4-207ENST00000460162 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.55■■□□□ 1.84
PTPN4-207ENST00000460162 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.55■■□□□ 1.84
PTPN4-207ENST00000460162 B4GALT4O60513 344 aa26.55■■□□□ 1.84
PTPN4-207ENST00000460162 CYP21A2P08686 494 aa26.55■■□□□ 1.84
PTPN4-207ENST00000460162 IRX6P78412 446 aaPredicted RBP26.55■■□□□ 1.84
PTPN4-207ENST00000460162 TMEM240Q5SV17 173 aa26.55■■□□□ 1.84
PTPN4-207ENST00000460162 SYTL5Q8TDW5 730 aaPredicted RBP26.55■■□□□ 1.84
PTPN4-207ENST00000460162 CYP2C18P33260 490 aa26.54■■□□□ 1.84
PTPN4-207ENST00000460162 TTLL4Q14679 1199 aa26.54■■□□□ 1.84
PTPN4-207ENST00000460162 RASIP1Q5U651 963 aa26.54■■□□□ 1.84
PTPN4-207ENST00000460162 C16orf59Q7L2K0 433 aa26.54■■□□□ 1.84
PTPN4-207ENST00000460162 NSUN6Q8TEA1 469 aaKnown RBP26.54■■□□□ 1.84
PTPN4-207ENST00000460162 CDX2Q99626 313 aaPredicted RBP26.54■■□□□ 1.84
PTPN4-207ENST00000460162 MTG1Q9BT17 334 aaPredicted RBP26.54■■□□□ 1.84
PTPN4-207ENST00000460162 NOC4LQ9BVI4 516 aaKnown RBP26.54■■□□□ 1.84
PTPN4-207ENST00000460162 ALDH8A1Q9H2A2 487 aaPredicted RBP26.54■■□□□ 1.84
PTPN4-207ENST00000460162 IL23AQ9NPF7 189 aa26.54■■□□□ 1.84
PTPN4-207ENST00000460162 GPHNQ9NQX3 736 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms