RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 GPKOWQ92917 476 aaPredicted RBP eCLIP12.53□□□□□ -0.4
CCDC12-204ENST00000460035 ZSCAN31Q96LW9 406 aaPredicted RBP12.53□□□□□ -0.4
CCDC12-204ENST00000460035 FLRT1Q9NZU1 646 aa12.53□□□□□ -0.4
CCDC12-204ENST00000460035 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
CCDC12-204ENST00000460035 DIS3Q9Y2L1 958 aaKnown RBP12.53□□□□□ -0.4
CCDC12-204ENST00000460035 CDKL5O76039 1030 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 LARGE1O95461 756 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 IGHA2P01877 340 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 HMGCRP04035 888 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 INHAP05111 366 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 RPS6P62753 249 aaKnown RBP12.52□□□□□ -0.41
CCDC12-204ENST00000460035 SLC30A10Q6XR72 485 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 SAMD3Q8N6K7 520 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 FAM133AQ8N9E0 248 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 ARMC5Q96C12 935 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 MAML3Q96JK9 1138 aa12.52□□□□□ -0.41
CCDC12-204ENST00000460035 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.41
CCDC12-204ENST00000460035 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.41
CCDC12-204ENST00000460035 WDR81Q562E7 1941 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 GCOM1H8Y6P7 765 aaPredicted RBP12.51□□□□□ -0.41
CCDC12-204ENST00000460035 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 OPLAHO14841 1288 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 DTNBO60941 627 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 POLR2MP0CAP2 368 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 HOXA13P31271 388 aaPredicted RBP12.51□□□□□ -0.41
CCDC12-204ENST00000460035 CYP2C19P33261 490 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 NAPAP54920 295 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 TRIM32Q13049 653 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 PFKFB3Q16875 520 aaPredicted RBP12.51□□□□□ -0.41
CCDC12-204ENST00000460035 OLFML2BQ68BL8 750 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 WWC2Q6AWC2 1192 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 ZNF467Q7Z7K2 595 aaPredicted RBP12.51□□□□□ -0.41
CCDC12-204ENST00000460035 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
CCDC12-204ENST00000460035 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
CCDC12-204ENST00000460035 CUL5Q93034 780 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 GTF3C6Q969F1 213 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 FGD4Q96M96 766 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 TINF2Q9BSI4 451 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 PSTPIP2Q9H939 334 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
CCDC12-204ENST00000460035 ADD3Q9UEY8 706 aaKnown RBP12.51□□□□□ -0.41
CCDC12-204ENST00000460035 DOCK5Q9H7D0 1870 aa12.51□□□□□ -0.41
CCDC12-204ENST00000460035 CCDC85CA6NKD9 419 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 SCG2P13521 617 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
CCDC12-204ENST00000460035 CNGA1P29973 690 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 CACNB2Q08289 660 aaPredicted RBP12.5□□□□□ -0.41
CCDC12-204ENST00000460035 PRAMEF19Q5SWL8 479 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 PPP1R18Q6NYC8 613 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 FCHSD1Q86WN1 690 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 CCDC83Q8IWF9 413 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 MSL3Q8N5Y2 521 aaKnown RBP12.5□□□□□ -0.41
CCDC12-204ENST00000460035 SMARCC2Q8TAQ2 1214 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
CCDC12-204ENST00000460035 SH2B1Q9NRF2 756 aaPredicted RBP12.5□□□□□ -0.41
CCDC12-204ENST00000460035 STK36Q9NRP7 1315 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 LOC102724159A0A0B4J2E5 919 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 SMCO2A6NFE2 343 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 ASB14A6NK59 587 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 STXBP3O00186 592 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 DEXIO95424 95 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 CCL5P13501 91 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 MCM2P49736 904 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 HSD17B4P51659 736 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 MRPL12P52815 198 aaKnown RBP12.49□□□□□ -0.41
CCDC12-204ENST00000460035 PWP2Q15269 919 aaKnown RBP12.49□□□□□ -0.41
CCDC12-204ENST00000460035 MTFR1Q15390 333 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 PKN1Q16512 942 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 MAP3K21Q5TCX8 1036 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 ARHGEF16Q5VV41 709 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 USP17L6PQ6QN14 398 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 MAMDC4Q6UXC1 1216 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 ZNF333Q96JL9 665 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 RMDN3Q96TC7 470 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 MPHOSPH6Q99547 160 aaKnown RBP12.49□□□□□ -0.41
CCDC12-204ENST00000460035 RNF208Q9H0X6 261 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 UNC93B1Q9H1C4 597 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 BARHL2Q9NY43 387 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 CNPY2Q9Y2B0 182 aa12.49□□□□□ -0.41
CCDC12-204ENST00000460035 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
CCDC12-204ENST00000460035 ASTN1O14525 1302 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 RPTORQ8N122 1335 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 SYNGAP1Q96PV0 1343 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 B4DLN1 442 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 PIK3CDO00329 1044 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 CTDNEP1O95476 244 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 SNAI1O95863 264 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-204ENST00000460035 ALDH5A1P51649 535 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-204ENST00000460035 ADCY7P51828 1080 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 PDE4DQ08499 809 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 ST3GAL1Q11201 340 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 ARMCX2Q7L311 632 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 DNERQ8NFT8 737 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 NSUN6Q8TEA1 469 aaKnown RBP12.48□□□□□ -0.41
CCDC12-204ENST00000460035 CCDC12Q8WUD4 166 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-204ENST00000460035 HMX1Q9NP08 348 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms