RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CYP2C19P33261 490 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 RPS6P62753 249 aaKnown RBP14.82□□□□□ -0.04
COL18A1-206ENST00000459895 GHRHRQ02643 423 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 BAATQ14032 418 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-206ENST00000459895 PPP2R5BQ15173 497 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 OLFML2BQ68BL8 750 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 RNF207Q6ZRF8 634 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 SLC26A6Q9BXS9 759 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 RNF26Q9BY78 433 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-206ENST00000459895 SLKQ9H2G2 1235 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-206ENST00000459895 STXBP3O00186 592 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 CTDNEP1O95476 244 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 HSD17B4P51659 736 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 MTFR1Q15390 333 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 PKN1Q16512 942 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 MAP3K21Q5TCX8 1036 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 PPP1R18Q6NYC8 613 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 TRMT44Q8IYL2 757 aaKnown RBP14.81□□□□□ -0.04
COL18A1-206ENST00000459895 TBC1D5Q92609 795 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 SHISA4Q96DD7 197 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 STK36Q9NRP7 1315 aa14.81□□□□□ -0.04
COL18A1-206ENST00000459895 CPLX1O14810 134 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 ST18O60284 1047 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 CFBP00751 764 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 CYBAP13498 195 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 SCG2P13521 617 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 HOXA13P31271 388 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-206ENST00000459895 ALDH5A1P51649 535 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-206ENST00000459895 NAPAP54920 295 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 PFKFB3Q16875 520 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-206ENST00000459895 ZNF467Q7Z7K2 595 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-206ENST00000459895 TRPV1Q8NER1 839 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 SYTL5Q8TDW5 730 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-206ENST00000459895 UNC93B1Q9H1C4 597 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 SLC5A4Q9NY91 659 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 BIN2Q9UBW5 565 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-206ENST00000459895 LIMCH1Q9UPQ0 1083 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 DIS3Q9Y2L1 958 aaKnown RBP14.8□□□□□ -0.04
COL18A1-206ENST00000459895 V9GY48 417 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-206ENST00000459895 SYNGAP1Q96PV0 1343 aa14.8□□□□□ -0.04
COL18A1-206ENST00000459895 hCG_1984214I3L0E3 225 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 PRPF3O43395 683 aaKnown RBP14.79□□□□□ -0.04
COL18A1-206ENST00000459895 CCND3P30281 292 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-206ENST00000459895 UBXN2AP68543 259 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 CACNB2Q08289 660 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-206ENST00000459895 TRAF1Q13077 416 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 FRMPD4Q14CM0 1322 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 UBE2SQ16763 222 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 ARMCX2Q7L311 632 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 MCF2L2Q86YR7 1114 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 CCDC83Q8IWF9 413 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 ZNF713Q8N859 430 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-206ENST00000459895 RGS22Q8NE09 1264 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 AIFM3Q96NN9 605 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 TINF2Q9BSI4 451 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.79□□□□□ -0.046e-7■■■■□ 21.6
COL18A1-206ENST00000459895 BARHL2Q9NY43 387 aa14.79□□□□□ -0.04
COL18A1-206ENST00000459895 RBM27Q9P2N5 1060 aaKnown RBP14.79□□□□□ -0.04
COL18A1-206ENST00000459895 JAK2O60674 1132 aa14.78□□□□□ -0.04
COL18A1-206ENST00000459895 CDKL5O76039 1030 aa14.78□□□□□ -0.04
COL18A1-206ENST00000459895 CCL5P13501 91 aa14.78□□□□□ -0.04
COL18A1-206ENST00000459895 MFSD14CQ5VZR4 134 aa14.78□□□□□ -0.04
COL18A1-206ENST00000459895 MAMDC4Q6UXC1 1216 aa14.78□□□□□ -0.04
COL18A1-206ENST00000459895 TRIM22Q8IYM9 498 aa14.78□□□□□ -0.04
COL18A1-206ENST00000459895 NSUN7Q8NE18 718 aaKnown RBP14.78□□□□□ -0.04
COL18A1-206ENST00000459895 VPS54Q9P1Q0 977 aa14.78□□□□□ -0.04
COL18A1-206ENST00000459895 MYH7BA7E2Y1 1941 aa14.77□□□□□ -0.04
COL18A1-206ENST00000459895 ADAMTS3O15072 1205 aa14.77□□□□□ -0.05
COL18A1-206ENST00000459895 DEXIO95424 95 aa14.77□□□□□ -0.05
COL18A1-206ENST00000459895 SNAI1O95863 264 aaPredicted RBP14.77□□□□□ -0.05
COL18A1-206ENST00000459895 EDNRBP24530 442 aa14.77□□□□□ -0.05
COL18A1-206ENST00000459895 ADCY7P51828 1080 aa14.77□□□□□ -0.05
COL18A1-206ENST00000459895 AKAP17AQ02040 695 aaKnown RBP14.77□□□□□ -0.05
COL18A1-206ENST00000459895 SSRP1Q08945 709 aaKnown RBP14.77□□□□□ -0.05
COL18A1-206ENST00000459895 CPLX2Q6PUV4 134 aaKnown RBP14.77□□□□□ -0.05
COL18A1-206ENST00000459895 USP17L6PQ6QN14 398 aa14.77□□□□□ -0.05
COL18A1-206ENST00000459895 FBXO16Q8IX29 292 aaPredicted RBP14.77□□□□□ -0.05
COL18A1-206ENST00000459895 MSL3Q8N5Y2 521 aaKnown RBP14.77□□□□□ -0.05
COL18A1-206ENST00000459895 IL31RAQ8NI17 732 aa14.77□□□□□ -0.05
COL18A1-206ENST00000459895 LENG1Q96BZ8 264 aaPredicted RBP14.77□□□□□ -0.05
COL18A1-206ENST00000459895 TAAR1Q96RJ0 339 aa14.77□□□□□ -0.05
COL18A1-206ENST00000459895 KATNBL1Q9H079 304 aa14.77□□□□□ -0.05
COL18A1-206ENST00000459895 PAK6Q9NQU5 681 aaPredicted RBP14.77□□□□□ -0.05
COL18A1-206ENST00000459895 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.77□□□□□ -0.05
COL18A1-206ENST00000459895 DOCK5Q9H7D0 1870 aa14.77□□□□□ -0.05
COL18A1-206ENST00000459895 RPTORQ8N122 1335 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 GCOM1H8Y6P7 765 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-206ENST00000459895 MEIS2O14770 477 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 POLR2MP0CAP2 368 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 EIF2AK2P19525 551 aaKnown RBP14.76□□□□□ -0.05
COL18A1-206ENST00000459895 SOX10P56693 466 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 PRAMEF19Q5SWL8 479 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 DNERQ8NFT8 737 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 MORC4Q8TE76 937 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 CUL5Q93034 780 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 MAF1Q9H063 256 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 PXMP2Q9NR77 195 aa14.76□□□□□ -0.05
COL18A1-206ENST00000459895 SH2B1Q9NRF2 756 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-206ENST00000459895 ADD3Q9UEY8 706 aaKnown RBP14.76□□□□□ -0.05
COL18A1-206ENST00000459895 ZHX1Q9UKY1 873 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms