RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 MICU3Q86XE3 530 aa24.06■■□□□ 1.44
VARS-218ENST00000459667 LZTS2Q9BRK4 669 aa24.06■■□□□ 1.44
VARS-218ENST00000459667 SPZ1Q9BXG8 430 aa24.06■■□□□ 1.44
VARS-218ENST00000459667 PCDHA1Q9Y5I3 950 aa24.06■■□□□ 1.44
VARS-218ENST00000459667 LOC102724159A0A0B4J2E5 919 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 PNMA6FA0A0J9YX94 578 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 PLEKHA8P1O95397 391 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 CPA1P15085 419 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 TRAF1Q13077 416 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 PWP2Q15269 919 aaKnown RBP24.05■■□□□ 1.44
VARS-218ENST00000459667 LRRC41Q15345 812 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 APOA5Q6Q788 366 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 BLOC1S2Q6QNY1 142 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 DNERQ8NFT8 737 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 MORC4Q8TE76 937 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 PIBF1Q8WXW3 757 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 TBC1D5Q92609 795 aa24.05■■□□□ 1.44
VARS-218ENST00000459667 EVI5O60447 810 aa24.04■■□□□ 1.44
VARS-218ENST00000459667 PGK1P00558 417 aa24.04■■□□□ 1.44
VARS-218ENST00000459667 SMARCA1P28370 1054 aa24.04■■□□□ 1.44
VARS-218ENST00000459667 FGD1P98174 961 aa24.04■■□□□ 1.44
VARS-218ENST00000459667 EEPD1Q7L9B9 569 aa24.04■■□□□ 1.44
VARS-218ENST00000459667 FBXO16Q8IX29 292 aaPredicted RBP24.04■■□□□ 1.44
VARS-218ENST00000459667 FANCBQ8NB91 859 aa24.04■■□□□ 1.44
VARS-218ENST00000459667 MPHOSPH6Q99547 160 aaKnown RBP24.04■■□□□ 1.44
VARS-218ENST00000459667 USP26Q9BXU7 913 aa24.04■■□□□ 1.44
VARS-218ENST00000459667 ADCY6O43306 1168 aa24.03■■□□□ 1.44
VARS-218ENST00000459667 DUSP11O75319 330 aaKnown RBP24.03■■□□□ 1.44
VARS-218ENST00000459667 CFBP00751 764 aa24.03■■□□□ 1.44
VARS-218ENST00000459667 PSMA5P28066 241 aa24.03■■□□□ 1.44
VARS-218ENST00000459667 RNF180Q86T96 592 aa24.03■■□□□ 1.44
VARS-218ENST00000459667 SRBD1Q8N5C6 995 aaKnown RBP24.03■■□□□ 1.44
VARS-218ENST00000459667 SYTL5Q8TDW5 730 aaPredicted RBP24.03■■□□□ 1.44
VARS-218ENST00000459667 RRP36Q96EU6 259 aaKnown RBP24.03■■□□□ 1.44
VARS-218ENST00000459667 SENP6Q9GZR1 1112 aaPredicted RBP24.03■■□□□ 1.44
VARS-218ENST00000459667 VTA1Q9NP79 307 aa24.03■■□□□ 1.44
VARS-218ENST00000459667 BRPF3Q9ULD4 1205 aa24.03■■□□□ 1.44
VARS-218ENST00000459667 SYNRGQ9UMZ2 1314 aa24.03■■□□□ 1.44
VARS-218ENST00000459667 OPLAHO14841 1288 aa24.02■■□□□ 1.44
VARS-218ENST00000459667 ADAMTS4O75173 837 aa24.02■■□□□ 1.44
VARS-218ENST00000459667 CASTP20810 708 aaKnown RBP24.02■■□□□ 1.44
VARS-218ENST00000459667 ADCYAP1R1P41586 468 aa24.02■■□□□ 1.44
VARS-218ENST00000459667 CMTR1Q8N1G2 835 aaKnown RBP24.02■■□□□ 1.44
VARS-218ENST00000459667 COL20A1Q9P218 1284 aa24.02■■□□□ 1.44
VARS-218ENST00000459667 SEC63Q9UGP8 760 aaKnown RBP24.02■■□□□ 1.44
VARS-218ENST00000459667 NR2E3Q9Y5X4 410 aa24.02■■□□□ 1.44
VARS-218ENST00000459667 KLF18A0A0U1RQI7 1052 aa24.01■■□□□ 1.43
VARS-218ENST00000459667 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.01■■□□□ 1.43
VARS-218ENST00000459667 B4DLN1 442 aa24.01■■□□□ 1.43
VARS-218ENST00000459667 ZBTB43O43298 467 aa24.01■■□□□ 1.43
VARS-218ENST00000459667 RPS6KB1P23443 525 aa24.01■■□□□ 1.43
VARS-218ENST00000459667 MRPL12P52815 198 aaKnown RBP24.01■■□□□ 1.43
VARS-218ENST00000459667 TNFAIP2Q03169 654 aa24.01■■□□□ 1.43
VARS-218ENST00000459667 PDE4DQ08499 809 aa24.01■■□□□ 1.43
VARS-218ENST00000459667 Q6ZUG5 572 aa24.01■■□□□ 1.43
VARS-218ENST00000459667 TMTC3Q6ZXV5 915 aa24.01■■□□□ 1.43
VARS-218ENST00000459667 PDGFCQ9NRA1 345 aa24.01■■□□□ 1.43
VARS-218ENST00000459667 H0YGN5 161 aa24■■□□□ 1.43
VARS-218ENST00000459667 EIF5BO60841 1220 aaKnown RBP24■■□□□ 1.43
VARS-218ENST00000459667 EDNRBP24530 442 aa24■■□□□ 1.43
VARS-218ENST00000459667 HSD17B4P51659 736 aa24■■□□□ 1.43
VARS-218ENST00000459667 GHRHRQ02643 423 aa24■■□□□ 1.43
VARS-218ENST00000459667 TAPT1Q6NXT6 567 aa24■■□□□ 1.43
VARS-218ENST00000459667 NOL8Q76FK4 1167 aaKnown RBP24■■□□□ 1.43
VARS-218ENST00000459667 TAAR1Q96RJ0 339 aa24■■□□□ 1.43
VARS-218ENST00000459667 RBM28Q9NW13 759 aaKnown RBP24■■□□□ 1.43
VARS-218ENST00000459667 RTN1Q16799 776 aa23.99■■□□□ 1.43
VARS-218ENST00000459667 LRRC26Q2I0M4 334 aa23.99■■□□□ 1.43
VARS-218ENST00000459667 C7orf61Q8IZ16 206 aa23.99■■□□□ 1.43
VARS-218ENST00000459667 CCDC82Q8N4S0 544 aa23.99■■□□□ 1.43
VARS-218ENST00000459667 NSUN6Q8TEA1 469 aaKnown RBP23.99■■□□□ 1.43
VARS-218ENST00000459667 BRF1Q92994 677 aa23.99■■□□□ 1.43
VARS-218ENST00000459667 SPC25Q9HBM1 224 aa23.99■■□□□ 1.43
VARS-218ENST00000459667 MAP3K20Q9NYL2 800 aaKnown RBP23.99■■□□□ 1.43
VARS-218ENST00000459667 NAP1L2Q9ULW6 460 aaPredicted RBP23.99■■□□□ 1.43
VARS-218ENST00000459667 GOLGA8AA7E2F4 631 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 GOLGA8BA8MQT2 603 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 C6orf222P0C671 652 aaPredicted RBP23.98■■□□□ 1.43
VARS-218ENST00000459667 RCAN1P53805 252 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 ATN1P54259 1190 aaPredicted RBP23.98■■□□□ 1.43
VARS-218ENST00000459667 GJA9P57773 515 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 APOBRQ0VD83 1088 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 IQSEC1Q6DN90 963 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 SAMD3Q8N6K7 520 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 FERMT2Q96AC1 680 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 RMDN3Q96TC7 470 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 UPF3AQ9H1J1 476 aaKnown RBP23.98■■□□□ 1.43
VARS-218ENST00000459667 PHF24Q9UPV7 400 aa23.98■■□□□ 1.43
VARS-218ENST00000459667 MYADML2A6NDP7 307 aa23.97■■□□□ 1.43
VARS-218ENST00000459667 SMPD1P17405 629 aa23.97■■□□□ 1.43
VARS-218ENST00000459667 HOXA13P31271 388 aaPredicted RBP23.97■■□□□ 1.43
VARS-218ENST00000459667 ARHGEF16Q5VV41 709 aa23.97■■□□□ 1.43
VARS-218ENST00000459667 KLHDC9Q8NEP7 349 aa23.97■■□□□ 1.43
VARS-218ENST00000459667 TSEN34Q9BSV6 310 aaKnown RBP23.97■■□□□ 1.43
VARS-218ENST00000459667 GNEQ9Y223 722 aaKnown RBP23.97■■□□□ 1.43
VARS-218ENST00000459667 CNTNAP5Q8WYK1 1306 aa23.96■■□□□ 1.43
VARS-218ENST00000459667 GCOM1H8Y6P7 765 aaPredicted RBP23.96■■□□□ 1.43
VARS-218ENST00000459667 POLR2MP0CAP2 368 aa23.96■■□□□ 1.43
VARS-218ENST00000459667 EIF2AK2P19525 551 aaKnown RBP23.96■■□□□ 1.43
VARS-218ENST00000459667 CST5P28325 142 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms