RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 EDIL3O43854 480 aa27.72■■■□□ 2.03
U2AF1-204ENST00000459639 IL17AQ16552 155 aa27.72■■■□□ 2.03
U2AF1-204ENST00000459639 ELP3Q9H9T3 547 aa27.72■■■□□ 2.03
U2AF1-204ENST00000459639 SPDYE5A6NIY4 337 aa27.72■■■□□ 2.03
U2AF1-204ENST00000459639 ZBED4O75132 1171 aa27.72■■■□□ 2.03
U2AF1-204ENST00000459639 POTEIP0CG38 1075 aa27.72■■■□□ 2.03
U2AF1-204ENST00000459639 POTEJP0CG39 1038 aa27.72■■■□□ 2.03
U2AF1-204ENST00000459639 DTHD1Q6ZMT9 781 aa27.72■■■□□ 2.03
U2AF1-204ENST00000459639 CKAP2LQ8IYA6 745 aa27.72■■■□□ 2.03
U2AF1-204ENST00000459639 MYPNQ86TC9 1320 aa27.71■■■□□ 2.03
U2AF1-204ENST00000459639 DEKP35659 375 aaKnown RBP27.71■■■□□ 2.03
U2AF1-204ENST00000459639 USP11P51784 963 aa27.71■■■□□ 2.03
U2AF1-204ENST00000459639 CATSPERGQ6ZRH7 1159 aa27.71■■■□□ 2.03
U2AF1-204ENST00000459639 SYMPKQ92797 1274 aaKnown RBP27.71■■■□□ 2.03
U2AF1-204ENST00000459639 SDF4Q9BRK5 362 aa27.71■■■□□ 2.03
U2AF1-204ENST00000459639 CTDP1Q9Y5B0 961 aaPredicted RBP27.71■■■□□ 2.03
U2AF1-204ENST00000459639 GCOM1H8Y6P7 765 aaPredicted RBP27.7■■■□□ 2.02
U2AF1-204ENST00000459639 VWA5AO00534 786 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 TDP2O95551 362 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 POLR2MP0CAP2 368 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 CCDC192P0DO97 292 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 MRE11P49959 708 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 MOXD1Q6UVY6 613 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 MOB2Q70IA6 237 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 CRYGNQ8WXF5 182 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 CLMNQ96JQ2 1002 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 AGBL1Q96MI9 1066 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 GRPEL1Q9HAV7 217 aa27.7■■■□□ 2.02
U2AF1-204ENST00000459639 DSG3P32926 999 aa27.69■■■□□ 2.02
U2AF1-204ENST00000459639 SREBF1P36956 1147 aa27.69■■■□□ 2.02
U2AF1-204ENST00000459639 COG2Q14746 738 aa27.69■■■□□ 2.02
U2AF1-204ENST00000459639 MAP1SQ66K74 1059 aaPredicted RBP27.69■■■□□ 2.02
U2AF1-204ENST00000459639 USP49Q70CQ1 688 aa27.69■■■□□ 2.02
U2AF1-204ENST00000459639 CNKSR2Q8WXI2 1034 aa27.69■■■□□ 2.02
U2AF1-204ENST00000459639 ATG4CQ96DT6 458 aa27.69■■■□□ 2.02
U2AF1-204ENST00000459639 P2RX7Q99572 595 aaKnown RBP27.69■■■□□ 2.02
U2AF1-204ENST00000459639 RRAGCQ9HB90 399 aa27.69■■■□□ 2.02
U2AF1-204ENST00000459639 ADAMTS5Q9UNA0 930 aa27.69■■■□□ 2.02
U2AF1-204ENST00000459639 KRBA2Q6ZNG9 492 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 POTEDQ86YR6 584 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 ELOA2Q8IYF1 753 aaPredicted RBP27.68■■■□□ 2.02
U2AF1-204ENST00000459639 EPSTI1Q96J88 318 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 A0A0G2JMZ2 1700 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 UNCXA6NJT0 531 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 CXCL11O14625 94 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 CFBP00751 764 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 HOXA13P31271 388 aaPredicted RBP27.68■■■□□ 2.02
U2AF1-204ENST00000459639 OAZ1P54368 228 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 PPIL2Q13356 520 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 CALCRLQ16602 461 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 OTUD5Q96G74 571 aa27.68■■■□□ 2.02
U2AF1-204ENST00000459639 RAVER2Q9HCJ3 691 aaKnown RBP27.68■■■□□ 2.02
U2AF1-204ENST00000459639 CYP3A7-CYP3A51PA0A087WV96 503 aa27.67■■■□□ 2.02
U2AF1-204ENST00000459639 SLC37A4O43826 429 aa27.67■■■□□ 2.02
U2AF1-204ENST00000459639 CYP3A7P24462 503 aa27.67■■■□□ 2.02
U2AF1-204ENST00000459639 ARHGAP4P98171 946 aa27.67■■■□□ 2.02
U2AF1-204ENST00000459639 GHRHRQ02643 423 aa27.67■■■□□ 2.02
U2AF1-204ENST00000459639 LDLRAD1Q5T700 205 aa27.67■■■□□ 2.02
U2AF1-204ENST00000459639 CPXCR1Q8N123 301 aa27.67■■■□□ 2.02
U2AF1-204ENST00000459639 PROCA1Q8NCQ7 364 aaPredicted RBP27.67■■■□□ 2.02
U2AF1-204ENST00000459639 MTMR9Q96QG7 549 aa27.67■■■□□ 2.02
U2AF1-204ENST00000459639 PYM1Q9BRP8 204 aaKnown RBP27.67■■■□□ 2.02
U2AF1-204ENST00000459639 DDX25Q9UHL0 483 aaKnown RBP27.67■■■□□ 2.02
U2AF1-204ENST00000459639 KCNH4Q9UQ05 1017 aa27.67■■■□□ 2.02
U2AF1-204ENST00000459639 A0A0G2JLL6 359 aaPredicted RBP27.66■■■□□ 2.02
U2AF1-204ENST00000459639 DCAF8L1A6NGE4 600 aa27.66■■■□□ 2.02
U2AF1-204ENST00000459639 POLR2DO15514 142 aaKnown RBP27.66■■■□□ 2.02
U2AF1-204ENST00000459639 LONRF3Q496Y0 759 aa27.66■■■□□ 2.02
U2AF1-204ENST00000459639 SASS6Q6UVJ0 657 aa27.66■■■□□ 2.02
U2AF1-204ENST00000459639 PRRT2Q7Z6L0 340 aaPredicted RBP27.66■■■□□ 2.02
U2AF1-204ENST00000459639 MCF2L2Q86YR7 1114 aa27.66■■■□□ 2.02
U2AF1-204ENST00000459639 SAMD3Q8N6K7 520 aa27.66■■■□□ 2.02
U2AF1-204ENST00000459639 REPS2Q8NFH8 660 aa27.66■■■□□ 2.02
U2AF1-204ENST00000459639 AK8Q96MA6 479 aa27.66■■■□□ 2.02
U2AF1-204ENST00000459639 MBOAT7Q96N66 472 aa27.66■■■□□ 2.02
U2AF1-204ENST00000459639 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.66■■■□□ 2.02
U2AF1-204ENST00000459639 IRF6O14896 467 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 TXLNAP40222 546 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 HSD17B4P51659 736 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 TYRO3Q06418 890 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 CNNM3Q8NE01 707 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 CLEC4DQ8WXI8 215 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 RBSNQ9H1K0 784 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 EHMT1Q9H9B1 1298 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 ALAS1P13196 640 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 TBC1D5Q92609 795 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 HOXC10Q9NYD6 342 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 MAP3K20Q9NYL2 800 aaKnown RBP27.65■■■□□ 2.02
U2AF1-204ENST00000459639 USP25Q9UHP3 1055 aa27.65■■■□□ 2.02
U2AF1-204ENST00000459639 TRAF5O00463 557 aa27.64■■■□□ 2.02
U2AF1-204ENST00000459639 CYP3A4P08684 503 aa27.64■■■□□ 2.02
U2AF1-204ENST00000459639 FCHSD1Q86WN1 690 aa27.64■■■□□ 2.02
U2AF1-204ENST00000459639 WNK4Q96J92 1243 aa27.64■■■□□ 2.02
U2AF1-204ENST00000459639 HOOK1Q9UJC3 728 aaKnown RBP27.64■■■□□ 2.02
U2AF1-204ENST00000459639 ATP2A1O14983 1001 aa27.63■■■□□ 2.01
U2AF1-204ENST00000459639 ACTN4O43707 911 aaKnown RBP27.63■■■□□ 2.01
U2AF1-204ENST00000459639 CIITAP33076 1130 aa27.63■■■□□ 2.01
U2AF1-204ENST00000459639 FXR2P51116 673 aaKnown RBP eCLIP27.63■■■□□ 2.01
U2AF1-204ENST00000459639 KANK3Q6NY19 840 aa27.63■■■□□ 2.01
U2AF1-204ENST00000459639 KIAA1468Q9P260 1216 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms