RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-215ENST00000457039 MAP3K21Q5TCX8 1036 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 TYW1BQ6NUM6 668 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 RBBP6Q7Z6E9 1792 aaKnown RBP16.32■□□□□ 0.2
SMPD4-215ENST00000457039 MCF2L2Q86YR7 1114 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 TNS4Q8IZW8 715 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 SAMD3Q8N6K7 520 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 ZNF333Q96JL9 665 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 PURBQ96QR8 312 aaKnown RBP16.32■□□□□ 0.2
SMPD4-215ENST00000457039 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
SMPD4-215ENST00000457039 PTPDC1A2A3K4 754 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 hCG_1984214I3L0E3 225 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 CPLX1O14810 134 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 ST18O60284 1047 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 CD2BP2O95400 341 aaKnown RBP16.31■□□□□ 0.2
SMPD4-215ENST00000457039 MAMDC4Q6UXC1 1216 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 HEATR3Q7Z4Q2 680 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 MSL3Q8N5Y2 521 aaKnown RBP16.31■□□□□ 0.2
SMPD4-215ENST00000457039 ZNF713Q8N859 430 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-215ENST00000457039 SYTL5Q8TDW5 730 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-215ENST00000457039 GPKOWQ92917 476 aaPredicted RBP eCLIP16.31■□□□□ 0.2
SMPD4-215ENST00000457039 ABHD8Q96I13 439 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 SLC26A6Q9BXS9 759 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 MAP3K20Q9NYL2 800 aaKnown RBP16.31■□□□□ 0.2
SMPD4-215ENST00000457039 COL20A1Q9P218 1284 aa16.31■□□□□ 0.2
SMPD4-215ENST00000457039 STXBP3O00186 592 aa16.3■□□□□ 0.2
SMPD4-215ENST00000457039 SCG2P13521 617 aa16.3■□□□□ 0.2
SMPD4-215ENST00000457039 CALML3P27482 149 aa16.3■□□□□ 0.2
SMPD4-215ENST00000457039 PPP1R18Q6NYC8 613 aa16.3■□□□□ 0.2
SMPD4-215ENST00000457039 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
SMPD4-215ENST00000457039 ZSCAN31Q96LW9 406 aaPredicted RBP16.3■□□□□ 0.2
SMPD4-215ENST00000457039 TINF2Q9BSI4 451 aa16.3■□□□□ 0.2
SMPD4-215ENST00000457039 BARHL2Q9NY43 387 aa16.3■□□□□ 0.2
SMPD4-215ENST00000457039 SYNGAP1Q96PV0 1343 aa16.29■□□□□ 0.2
SMPD4-215ENST00000457039 STK36Q9NRP7 1315 aa16.29■□□□□ 0.2
SMPD4-215ENST00000457039 PIK3CDO00329 1044 aa16.29■□□□□ 0.2
SMPD4-215ENST00000457039 CDKL5O76039 1030 aa16.29■□□□□ 0.2
SMPD4-215ENST00000457039 CFBP00751 764 aa16.29■□□□□ 0.2
SMPD4-215ENST00000457039 CYP2C19P33261 490 aa16.29■□□□□ 0.2
SMPD4-215ENST00000457039 CACNB2Q08289 660 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-215ENST00000457039 SSRP1Q08945 709 aaKnown RBP16.29■□□□□ 0.2
SMPD4-215ENST00000457039 MORC4Q8TE76 937 aa16.29■□□□□ 0.2
SMPD4-215ENST00000457039 SHISA4Q96DD7 197 aa16.29■□□□□ 0.2
SMPD4-215ENST00000457039 SH2B1Q9NRF2 756 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-215ENST00000457039 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 GCOM1H8Y6P7 765 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-215ENST00000457039 MEIS2O14770 477 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 DEXIO95424 95 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-215ENST00000457039 POLR2MP0CAP2 368 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
SMPD4-215ENST00000457039 ALDH5A1P51649 535 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-215ENST00000457039 UBXN2AP68543 259 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 AKAP17AQ02040 695 aaKnown RBP16.28■□□□□ 0.2
SMPD4-215ENST00000457039 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
SMPD4-215ENST00000457039 MTFR1Q15390 333 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 MFSD14CQ5VZR4 134 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 TRIM22Q8IYM9 498 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 NSUN7Q8NE18 718 aaKnown RBP16.28■□□□□ 0.2
SMPD4-215ENST00000457039 TRPV1Q8NER1 839 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 DNERQ8NFT8 737 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 TAAR1Q96RJ0 339 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 ADD3Q9UEY8 706 aaKnown RBP16.28■□□□□ 0.2
SMPD4-215ENST00000457039 BRCA2P51587 3418 aa16.28■□□□□ 0.2
SMPD4-215ENST00000457039 ASB14A6NK59 587 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 DTNBO60941 627 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 CYBAP13498 195 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 FDPSP14324 419 aaKnown RBP16.27■□□□□ 0.2
SMPD4-215ENST00000457039 EDNRBP24530 442 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 HOXA13P31271 388 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-215ENST00000457039 MCM2P49736 904 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 NAPAP54920 295 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 ARMCX2Q7L311 632 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 TEX2Q8IWB9 1127 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 KATNBL1Q9H079 304 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 UNC93B1Q9H1C4 597 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 PSTPIP2Q9H939 334 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 BIN2Q9UBW5 565 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-215ENST00000457039 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.2
SMPD4-215ENST00000457039 RPTORQ8N122 1335 aa16.26■□□□□ 0.19
SMPD4-215ENST00000457039 ESYT2A0FGR8 921 aa16.26■□□□□ 0.19
SMPD4-215ENST00000457039 ZNF865P0CJ78 1059 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-215ENST00000457039 USP17L6PQ6QN14 398 aa16.26■□□□□ 0.19
SMPD4-215ENST00000457039 CCDC83Q8IWF9 413 aa16.26■□□□□ 0.19
SMPD4-215ENST00000457039 SMARCC2Q8TAQ2 1214 aa16.26■□□□□ 0.19
SMPD4-215ENST00000457039 AIFM3Q96NN9 605 aa16.26■□□□□ 0.19
SMPD4-215ENST00000457039 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
SMPD4-215ENST00000457039 PAK6Q9NQU5 681 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-215ENST00000457039 SH3GLB2Q9NR46 395 aa16.26■□□□□ 0.19
SMPD4-215ENST00000457039 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-215ENST00000457039 DDX49Q9Y6V7 483 aaKnown RBP16.26■□□□□ 0.19
SMPD4-215ENST00000457039 LRRC37A2A6NM11 1700 aa16.25■□□□□ 0.19
SMPD4-215ENST00000457039 FRMPD4Q14CM0 1322 aa16.25■□□□□ 0.19
SMPD4-215ENST00000457039 SMCO2A6NFE2 343 aa16.25■□□□□ 0.19
SMPD4-215ENST00000457039 JAK2O60674 1132 aa16.25■□□□□ 0.19
SMPD4-215ENST00000457039 CCL5P13501 91 aa16.25■□□□□ 0.19
SMPD4-215ENST00000457039 CCND3P30281 292 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-215ENST00000457039 PRAMEF19Q5SWL8 479 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms