RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TCEANC2Q96MN5 208 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 SEC63Q9UGP8 760 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 PDE4DIPQ5VU43 2346 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 FRMPD3Q5JV73 1810 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 LOC102724159A0A0B4J2E5 919 aa20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 DUSP11O75319 330 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 EXOSC10Q01780 885 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 TNFAIP2Q03169 654 aa20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 COL9A3Q14050 684 aaPredicted RBP20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 PWP2Q15269 919 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 BLOC1S2Q6QNY1 142 aa20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 TBC1D5Q92609 795 aa20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 MTMR8Q96EF0 704 aa20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 SNX14Q9Y5W7 946 aa20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 BRCA2P51587 3418 aa20.95■□□□□ 0.94
PDLIM2-215ENST00000456545 H0YGN5 161 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 EPB41L2O43491 1005 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 COL6A1P12109 1028 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 SMARCA1P28370 1054 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 ADCYAP1R1P41586 468 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 ATN1P54259 1190 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 IQSEC1Q6DN90 963 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 SGMS1Q86VZ5 419 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 MICU3Q86XE3 530 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 C7orf61Q8IZ16 206 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 FANCBQ8NB91 859 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 FERMT2Q96AC1 680 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 LENG1Q96BZ8 264 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 VTA1Q9NP79 307 aa20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 DDX49Q9Y6V7 483 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-215ENST00000456545 CYTH3O43739 400 aa20.93■□□□□ 0.94
PDLIM2-215ENST00000456545 C6orf222P0C671 652 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-215ENST00000456545 FBXO16Q8IX29 292 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-215ENST00000456545 CCDC82Q8N4S0 544 aa20.93■□□□□ 0.94
PDLIM2-215ENST00000456545 KCNB2Q92953 911 aa20.93■□□□□ 0.94
PDLIM2-215ENST00000456545 SPZ1Q9BXG8 430 aa20.93■□□□□ 0.94
PDLIM2-215ENST00000456545 AP5M1Q9H0R1 490 aa20.93■□□□□ 0.94
PDLIM2-215ENST00000456545 ASTN1O14525 1302 aa20.93■□□□□ 0.94
PDLIM2-215ENST00000456545 BAZ2BQ9UIF8 2168 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-215ENST00000456545 ZBTB43O43298 467 aa20.92■□□□□ 0.94
PDLIM2-215ENST00000456545 ARHGEF16Q5VV41 709 aa20.92■□□□□ 0.94
PDLIM2-215ENST00000456545 SYTL5Q8TDW5 730 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-215ENST00000456545 NSUN6Q8TEA1 469 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-215ENST00000456545 TAAR1Q96RJ0 339 aa20.92■□□□□ 0.94
PDLIM2-215ENST00000456545 RMDN3Q96TC7 470 aa20.92■□□□□ 0.94
PDLIM2-215ENST00000456545 MAP3K20Q9NYL2 800 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-215ENST00000456545 KLF18A0A0U1RQI7 1052 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 EIF5BO60841 1220 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 PPP1R11O60927 126 aaPredicted RBP20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 PLEKHA8P1O95397 391 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 CPA1P15085 419 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 CASTP20810 708 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 SLC35G1Q2M3R5 365 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 GNASQ5JWF2 1037 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 APOA5Q6Q788 366 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 Q6ZUG5 572 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 CMTR1Q8N1G2 835 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 SAMD3Q8N6K7 520 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 PCSK9Q8NBP7 692 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 MORC4Q8TE76 937 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 VTI1AQ96AJ9 217 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 USP26Q9BXU7 913 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 KATNBL1Q9H079 304 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 PDGFCQ9NRA1 345 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 RBM28Q9NW13 759 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 SYNRGQ9UMZ2 1314 aa20.91■□□□□ 0.94
PDLIM2-215ENST00000456545 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-215ENST00000456545 GCOM1H8Y6P7 765 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-215ENST00000456545 DYNC1LI2O43237 492 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-215ENST00000456545 POLR2MP0CAP2 368 aa20.9■□□□□ 0.94
PDLIM2-215ENST00000456545 RTN1Q16799 776 aa20.9■□□□□ 0.94
PDLIM2-215ENST00000456545 LRRC26Q2I0M4 334 aa20.9■□□□□ 0.94
PDLIM2-215ENST00000456545 TAPT1Q6NXT6 567 aa20.9■□□□□ 0.94
PDLIM2-215ENST00000456545 SRBD1Q8N5C6 995 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-215ENST00000456545 TSEN34Q9BSV6 310 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-215ENST00000456545 GOLGA8AA7E2F4 631 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 GOLGA8BA8MQT2 603 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 ADAMTS4O75173 837 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 RPS6KB1P23443 525 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 GJA9P57773 515 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 KCNA10Q16322 511 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 SLC39A5Q6ZMH5 540 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 CUL5Q93034 780 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 IWS1Q96ST2 819 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 WDR11Q9BZH6 1224 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 BRPF3Q9ULD4 1205 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 PHF24Q9UPV7 400 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 ATP11BQ9Y2G3 1177 aa20.89■□□□□ 0.93
PDLIM2-215ENST00000456545 ZEB2O60315 1214 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 SMPD1P17405 629 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 EIF2AK2P19525 551 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 HOXA13P31271 388 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 HSD17B4P51659 736 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 ACLYP53396 1101 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 STXBP2Q15833 593 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 TMTC3Q6ZXV5 915 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 TLK2Q86UE8 772 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 FCHSD1Q86WN1 690 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 BRF1Q92994 677 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 COL20A1Q9P218 1284 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms