RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NEUROD6Q96NK8 337 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 MED1Q15648 1581 aaPredicted RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 ERFP50548 548 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 ALDH5A1P51649 535 aaPredicted RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 POU5F1Q01860 360 aaKnown RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 GUCY2DQ02846 1103 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 DPY19L2P1Q6NXN4 242 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 TBC1D1Q86TI0 1168 aaPredicted RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 CEP112Q8N8E3 955 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 ZNF384Q8TF68 577 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 TBC1D22AQ8WUA7 517 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 TNFRSF25Q93038 417 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 TACO1Q9BSH4 297 aaKnown RBP5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 TMEM60Q9H2L4 133 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 PAG1Q9NWQ8 432 aa5.06□□□□□ -1.6
DEPDC1-202ENST00000456315 CHD7Q9P2D1 2997 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 A0A087X0T9 212 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 BHMG1C9JSJ3 638 aaPredicted RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 NRDCO43847 1150 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 LRRN2O75325 713 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM228BP0C875 321 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 NR1D1P20393 614 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 DHX9Q08211 1270 aaKnown RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM69CQ0P6D2 419 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 NAA25Q14CX7 972 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 WHAMMP3Q1A5X7 153 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 NUGGCQ68CJ6 796 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 SPOCK2Q92563 424 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 DNAJC7Q99615 494 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 SLX1AQ9BQ83 275 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 CELF4Q9BZC1 486 aaKnown RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 MLXIPLQ9NP71 852 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 FLT4P35916 1363 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM205AQ6ZU69 1335 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PXDNLA1KZ92 1463 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 CYP2D7A0A087X1C5 515 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 POTEB2H3BUK9 544 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PPP6R2O75170 966 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 CLTAP09496 248 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 MCAMP43121 646 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 COPB1P53618 953 aaKnown RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 FKBP4Q02790 459 aaKnown RBP eCLIP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PSMD2Q13200 908 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 G3BP1Q13283 466 aaKnown RBP eCLIP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 SLC5A9Q2M3M2 681 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 ANKRD20A2Q5SQ80 823 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 RNF187Q5TA31 235 aaPredicted RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 ANKRD20A1Q5TYW2 823 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 ANKRD20A3Q5VUR7 823 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PDXDC2PQ6P474 469 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 GOLGA6L1Q8N7Z2 621 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 SYMPKQ92797 1274 aaKnown RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 SEC16BQ96JE7 1060 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 OSBPL9Q96SU4 736 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 YIPF2Q9BWQ6 316 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 CABP5Q9NP86 173 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 DDX21Q9NR30 783 aaKnown RBP eCLIP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PLAGL2Q9UPG8 496 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 MARF1Q9Y4F3 1742 aaKnown RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 SH3TC1Q8TE82 1336 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PCDH11XQ9BZA7 1347 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 ATMQ13315 3056 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 C5orf60A6NFR6 353 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 GPAA1O43292 621 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 RAD51CO43502 376 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 UBOX5O94941 541 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 TUBB4AP04350 444 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PCCAP05165 728 aaPredicted RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PYGBP11216 843 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 SLC1A4P43007 532 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 LLGL1Q15334 1064 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PABPC1LQ4VXU2 614 aaKnown RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 PARP9Q8IXQ6 854 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 KCNV2Q8TDN2 545 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 BAP1Q92560 729 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 ADAM22Q9P0K1 906 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 STIM2Q9P246 746 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 SLAIN2Q9P270 581 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 C15orf41Q9Y2V0 281 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 BAZ2AQ9UIF9 1905 aaKnown RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 OVOS2A0A0G2JMS6 1433 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 SIGLEC16A6NMB1 481 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 B4DLN1 442 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 ZSCAN9O15535 394 aaPredicted RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 BUB1BO60566 1050 aaPredicted RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 C4AP0C0L4 1744 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 C4BP0C0L5 1744 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 HSD17B3P37058 310 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 KBTBD2Q8IY47 623 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 CRACR2AQ9BSW2 395 aa5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 U3KPZ7 1027 aaPredicted RBP5.05□□□□□ -1.6
DEPDC1-202ENST00000456315 A0A087WZG4 1122 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 E7EVH7 732 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 IFIT3O14879 490 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 BUB1O43683 1085 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 FTCDO95954 541 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 CYP1A1P04798 512 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 FCER1AP12319 257 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ERCC5P28715 1186 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PLCD1P51178 756 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms