RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 PEX11GQ96HA9 241 aa4.19□□□□□ -1.74
LINC02540-201ENST00000455554 FCRL3Q96P31 734 aaPredicted RBP4.19□□□□□ -1.74
LINC02540-201ENST00000455554 UBP1Q9NZI7 540 aa4.19□□□□□ -1.74
LINC02540-201ENST00000455554 NUDT5Q9UKK9 219 aa4.19□□□□□ -1.74
LINC02540-201ENST00000455554 FAM86C2PA6NEL3 165 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 PATL2C9JE40 543 aaKnown RBP4.18□□□□□ -1.74
LINC02540-201ENST00000455554 CYR61O00622 381 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 SMARCA5O60264 1052 aaPredicted RBP4.18□□□□□ -1.74
LINC02540-201ENST00000455554 IFNGR1P15260 489 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 ITGAEP38570 1179 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 PMS1P54277 932 aaKnown RBP4.18□□□□□ -1.74
LINC02540-201ENST00000455554 ZNF445P59923 1031 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 TAGLNQ01995 201 aaKnown RBP4.18□□□□□ -1.74
LINC02540-201ENST00000455554 APOBRQ0VD83 1088 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 KIAA2012Q0VF49 1180 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 RGL3Q3MIN7 710 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 ANKRD39Q53RE8 183 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 TDRD10Q5VZ19 366 aaKnown RBP4.18□□□□□ -1.74
LINC02540-201ENST00000455554 FBXO33Q7Z6M2 555 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 LGI4Q8N135 537 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 FIBCD1Q8N539 461 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 LINC00482Q8N8I6 264 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 NETO2Q8NC67 525 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 SMARCC1Q92922 1105 aaPredicted RBP4.18□□□□□ -1.74
LINC02540-201ENST00000455554 BRF1Q92994 677 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 MENTQ9BUN1 341 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 MRIQ9BWK5 157 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 SSBP3Q9BWW4 388 aaPredicted RBP4.18□□□□□ -1.74
LINC02540-201ENST00000455554 GP6Q9HCN6 339 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 INVSQ9Y283 1065 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 SF3B6Q9Y3B4 125 aaKnown RBP4.18□□□□□ -1.74
LINC02540-201ENST00000455554 FHOD1Q9Y613 1164 aa4.18□□□□□ -1.74
LINC02540-201ENST00000455554 CD3EP07766 207 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 ACRP10323 421 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 SMAD4Q13485 552 aaKnown RBP4.17□□□□□ -1.74
LINC02540-201ENST00000455554 CDSNQ15517 529 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 DCAF15Q66K64 600 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 INTS3Q68E01 1043 aaKnown RBP4.17□□□□□ -1.74
LINC02540-201ENST00000455554 BORAQ6PGQ7 559 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 CRIP3Q6Q6R5 217 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 GLB1LQ6UWU2 654 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 FAM124AQ86V42 546 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 ZFPM1Q8IX07 1006 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 LZTR1Q8N653 840 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 SH3RF3Q8TEJ3 882 aaPredicted RBP4.17□□□□□ -1.74
LINC02540-201ENST00000455554 KISS1RQ969F8 398 aaPredicted RBP4.17□□□□□ -1.74
LINC02540-201ENST00000455554 DDX11Q96FC9 970 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 ADAMTS1Q9UHI8 967 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 ST6GALNAC2Q9UJ37 374 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 ZNF536O15090 1300 aa4.17□□□□□ -1.74
LINC02540-201ENST00000455554 ZBTB7AO95365 584 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 CYP2C8P10632 490 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 CD247P20963 164 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 ACVRL1P37023 503 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 POU4F1Q01851 419 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 FAM26FQ5R3K3 315 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 AXDND1Q5T1B0 1012 aaPredicted RBP4.16□□□□□ -1.74
LINC02540-201ENST00000455554 PPFIBP1Q86W92 1011 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 NKD1Q969G9 470 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 SLITRK6Q9H5Y7 841 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 TSC22D4Q9Y3Q8 395 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 RWDD3Q9Y3V2 267 aa4.16□□□□□ -1.74
LINC02540-201ENST00000455554 MROH6A6NGR9 719 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 PPP1R11O60927 126 aaPredicted RBP4.15□□□□□ -1.75
LINC02540-201ENST00000455554 C8BP07358 591 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 ITGA4P13612 1032 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 RPL13P26373 211 aaKnown RBP4.15□□□□□ -1.75
LINC02540-201ENST00000455554 THBS2P35442 1172 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 EEF1DP3Q658K8 133 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 RCSD1Q6JBY9 416 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 USP51Q70EK9 711 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 SND1Q7KZF4 910 aaKnown RBP eCLIP4.15□□□□□ -1.75
LINC02540-201ENST00000455554 LIMS2Q7Z4I7 341 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 SLITRK4Q8IW52 837 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 ZDHHC15Q96MV8 337 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 GORASP1Q9BQQ3 440 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 NOL6Q9H6R4 1146 aaKnown RBP4.15□□□□□ -1.75
LINC02540-201ENST00000455554 PCDH18Q9HCL0 1135 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 GGT7Q9UJ14 662 aa4.15□□□□□ -1.75
LINC02540-201ENST00000455554 FZD7O75084 574 aa4.14□□□□□ -1.75
LINC02540-201ENST00000455554 TP53P04637 393 aaPredicted RBP4.14□□□□□ -1.75
LINC02540-201ENST00000455554 DNAJC14Q6Y2X3 702 aaPredicted RBP4.14□□□□□ -1.75
LINC02540-201ENST00000455554 TAB3Q8N5C8 712 aaPredicted RBP4.14□□□□□ -1.75
LINC02540-201ENST00000455554 C11orf84Q9BUA3 381 aaPredicted RBP4.14□□□□□ -1.75
LINC02540-201ENST00000455554 NT5C1AQ9BXI3 368 aa4.14□□□□□ -1.75
LINC02540-201ENST00000455554 ZNF451Q9Y4E5 1061 aa4.14□□□□□ -1.75
LINC02540-201ENST00000455554 A0A087WZG4 1122 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 SURF1Q15526 300 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 CRB2Q5IJ48 1285 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 C9orf131Q5VYM1 1079 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 WWC2Q6AWC2 1192 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 MCTP2Q6DN12 878 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 HS2ST1Q7LGA3 356 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 KYQ8NBH2 561 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 CDK5RAP1Q96SZ6 601 aaKnown RBP4.13□□□□□ -1.75
LINC02540-201ENST00000455554 MTA3Q9BTC8 594 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 MCMBPQ9BTE3 642 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 ZNF747Q9BV97 191 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 VPS11Q9H270 941 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 FAM86C1Q9NVL1 165 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms