RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 RPS26P62854 115 aaKnown RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 PABPC4Q13310 644 aaKnown RBP eCLIP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 MPP2Q14168 576 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 C6orf15Q6UXA7 325 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 BNC2Q6ZN30 1099 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 LRRC69Q6ZNQ3 347 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 ATG9AQ7Z3C6 839 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 DEFB132Q7Z7B7 95 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 LSRQ86X29 649 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 NBPF5PQ86XG9 351 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 TRIM42Q8IWZ5 723 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 C7orf43Q8WVR3 580 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 CEP63Q96MT8 703 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 INSM2Q96T92 566 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 ARPC5LQ9BPX5 153 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 MIR1-1HGQ9H1L0 117 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 GREM2Q9H772 168 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 ZIM2Q9NZV7 527 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 STAP2Q9UGK3 403 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 ZNRF3Q9ULT6 936 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 SALL3Q9BXA9 1300 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 COL24A1Q17RW2 1714 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 RTL9Q8NET4 1388 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 TAF1P21675 1872 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 A0A0U1RQG5 324 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 A0A1B0GTH6 734 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 ANKRD18BA2A2Z9 1011 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 SPINT1O43278 529 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 KATNA1O75449 491 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 FAM153BP0C7A2 387 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 ITGA6P23229 1130 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 NEK2P51955 445 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 TFCP2Q12800 502 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 FOXD4Q12950 439 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 SF3B3Q15393 1217 aaKnown RBP6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 SLC15A2Q16348 729 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 CCDC152Q4G0S7 254 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 LRRC24Q50LG9 513 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 BMP2KLQ5H9B9 411 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 ZC3H12BQ5HYM0 836 aaKnown RBP6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 WDR78Q5VTH9 848 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 REXO1Q8N1G1 1221 aaKnown RBP6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 CRIPAKQ8N1N5 446 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 CLASRPQ8N2M8 674 aaKnown RBP6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 RIN3Q8TB24 985 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 GATAD2BQ8WXI9 593 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 HPS1Q92902 700 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 PLD4Q96BZ4 506 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 EAF2Q96CJ1 260 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 SPATA9Q9BWV2 254 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 PUS3Q9BZE2 481 aaKnown RBP6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 TIMMDC1Q9NPL8 285 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 STK32BQ9NY57 414 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 KANSL3Q9P2N6 904 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 MAPRE3Q9UPY8 281 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 PNPLA7Q6ZV29 1317 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 LAMB2P55268 1798 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 CARMIL3Q8ND23 1372 aa6.18□□□□□ -1.42
HMGB1P4-201ENST00000455362 CASZ1Q86V15 1759 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 CCDC163A0A0D9SF12 145 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 GOLGA6CA6NDK9 693 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 GOLGA6BA6NDN3 693 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 PHF20L1A8MW92 1017 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 POLRMTO00411 1230 aaKnown RBP6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 NPHP1O15259 732 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 RFPL3O75679 317 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 EGFRP00533 1210 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 SERPINB2P05120 415 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 IFIT2P09913 472 aaKnown RBP6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 GOLGA6DP0CG33 693 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 MX1P20591 662 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 CDC27P30260 824 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 SMCPP49901 116 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 DDR1Q08345 913 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 POU4F2Q12837 409 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 LONRF2Q1L5Z9 754 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 TTC22Q5TAA0 569 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 PEAR1Q5VY43 1037 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 LDHAL6AQ6ZMR3 332 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 LYSMD3Q7Z3D4 306 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 RNF180Q86T96 592 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 CCDC84Q86UT8 332 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 AACSQ86V21 672 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 RBBP8NLQ8NC74 664 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 TTC8Q8TAM2 541 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 PPM1EQ8WY54 764 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 ZIC5Q96T25 663 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 SMAD5Q99717 465 aaKnown RBP6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 ANP32EQ9BTT0 268 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 ZNF700Q9H0M5 742 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 BRMS1Q9HCU9 246 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 GPR108Q9NPR9 543 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 SEC31BQ9NQW1 1179 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 GOLGA6AQ9NYA3 693 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 AOX1Q06278 1338 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 ABCC12Q96J65 1359 aa6.17□□□□□ -1.42
HMGB1P4-201ENST00000455362 QSER1Q2KHR3 1735 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms