RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 TBC1D5Q92609 795 aa19.02■□□□□ 0.63
CCDC90B-202ENST00000455220 PCDHA6Q9UN73 950 aa19.02■□□□□ 0.63
CCDC90B-202ENST00000455220 PCDHA8Q9Y5H6 950 aa19.02■□□□□ 0.63
CCDC90B-202ENST00000455220 PCNTO95613 3336 aa19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 GCOM1H8Y6P7 765 aaPredicted RBP19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 POLR2MP0CAP2 368 aa19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 UBE2SQ16763 222 aa19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 MCTP1Q6DN14 999 aa19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 USP17L6PQ6QN14 398 aa19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 FERMT3Q86UX7 667 aa19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 NCAPG2Q86XI2 1143 aa19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 NOSTRINQ8IVI9 506 aa19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 PORCNQ9H237 461 aa19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 ZSCAN16Q9H4T2 348 aaPredicted RBP19.01■□□□□ 0.63
CCDC90B-202ENST00000455220 CFBP00751 764 aa19■□□□□ 0.63
CCDC90B-202ENST00000455220 AP3B2Q13367 1082 aa19■□□□□ 0.63
CCDC90B-202ENST00000455220 MCTP2Q6DN12 878 aa19■□□□□ 0.63
CCDC90B-202ENST00000455220 BRAPQ7Z569 592 aa19■□□□□ 0.63
CCDC90B-202ENST00000455220 RASGRP4Q8TDF6 673 aa19■□□□□ 0.63
CCDC90B-202ENST00000455220 R3HDMLQ9H3Y0 253 aa19■□□□□ 0.63
CCDC90B-202ENST00000455220 A1CFQ9NQ94 594 aaKnown RBP19■□□□□ 0.63
CCDC90B-202ENST00000455220 RPS6P62753 249 aaKnown RBP18.99■□□□□ 0.63
CCDC90B-202ENST00000455220 GNL2Q13823 731 aaKnown RBP18.99■□□□□ 0.63
CCDC90B-202ENST00000455220 RNF207Q6ZRF8 634 aa18.99■□□□□ 0.63
CCDC90B-202ENST00000455220 EFCC1Q9HA90 598 aa18.99■□□□□ 0.63
CCDC90B-202ENST00000455220 RNF186Q9NXI6 227 aa18.99■□□□□ 0.63
CCDC90B-202ENST00000455220 CYP39A1Q9NYL5 469 aa18.99■□□□□ 0.63
CCDC90B-202ENST00000455220 BIN2Q9UBW5 565 aaPredicted RBP18.99■□□□□ 0.63
CCDC90B-202ENST00000455220 PFASO15067 1338 aa18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 FOSP01100 380 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 HOXA13P31271 388 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 EARS2Q5JPH6 523 aaKnown RBP18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 FOXD4L5Q5VV16 416 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 JAKMIP3Q5VZ66 844 aa18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 NSMFQ6X4W1 530 aa18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 SLC30A10Q6XR72 485 aa18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 KRT25Q7Z3Z0 450 aa18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 SYTL5Q8TDW5 730 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 FOXD4L4Q8WXT5 416 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 TMEM260Q9NX78 707 aa18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 LCTP09848 1927 aa18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 MAPK4P31152 587 aa18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 BAATQ14032 418 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 NOM1Q5C9Z4 860 aaKnown RBP18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 SAGE1Q9NXZ1 904 aa18.98■□□□□ 0.63
CCDC90B-202ENST00000455220 MYH15Q9Y2K3 1946 aa18.97■□□□□ 0.63
CCDC90B-202ENST00000455220 CCDC194A0A1B0GVG4 234 aa18.97■□□□□ 0.63
CCDC90B-202ENST00000455220 PIK3AP1Q6ZUJ8 805 aa18.97■□□□□ 0.63
CCDC90B-202ENST00000455220 ABRAQ8N0Z2 381 aa18.97■□□□□ 0.63
CCDC90B-202ENST00000455220 ANO3Q9BYT9 981 aa18.97■□□□□ 0.63
CCDC90B-202ENST00000455220 COL20A1Q9P218 1284 aa18.97■□□□□ 0.63
CCDC90B-202ENST00000455220 PLXNB2O15031 1838 aa18.96■□□□□ 0.63
CCDC90B-202ENST00000455220 FRMPD4Q14CM0 1322 aa18.96■□□□□ 0.63
CCDC90B-202ENST00000455220 FAM205CA6NFA0 338 aa18.96■□□□□ 0.63
CCDC90B-202ENST00000455220 SPDYE3A6NKU9 549 aa18.96■□□□□ 0.63
CCDC90B-202ENST00000455220 TRPA1O75762 1119 aa18.96■□□□□ 0.63
CCDC90B-202ENST00000455220 NONOQ15233 471 aaKnown RBP eCLIP18.96■□□□□ 0.63
CCDC90B-202ENST00000455220 MYSM1Q5VVJ2 828 aa18.96■□□□□ 0.63
CCDC90B-202ENST00000455220 ANKRD35Q8N283 1001 aa18.96■□□□□ 0.63
CCDC90B-202ENST00000455220 DNAJC5GQ8N7S2 189 aa18.96■□□□□ 0.63
CCDC90B-202ENST00000455220 ZNF236Q9UL36 1845 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 STRNO43815 780 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 TBC1D8O95759 1140 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 FCER1AP12319 257 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 MAP2K1Q02750 393 aaPredicted RBP18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 KCTD2Q14681 263 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 GPR142Q7Z601 462 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 FCHSD1Q86WN1 690 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 PGBD1Q96JS3 809 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 MMP19Q99542 508 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 ATP6V1DQ9Y5K8 247 aa18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 ZNFX1Q9P2E3 1918 aaKnown RBP18.95■□□□□ 0.62
CCDC90B-202ENST00000455220 RPTORQ8N122 1335 aa18.94■□□□□ 0.62
CCDC90B-202ENST00000455220 MYH7BA7E2Y1 1941 aa18.94■□□□□ 0.62
CCDC90B-202ENST00000455220 DNAJC25-GNG10A0A024R161 153 aa18.94■□□□□ 0.62
CCDC90B-202ENST00000455220 TRAPPC10P48553 1259 aa18.94■□□□□ 0.62
CCDC90B-202ENST00000455220 WDR78Q5VTH9 848 aa18.94■□□□□ 0.62
CCDC90B-202ENST00000455220 PLEKHH3Q7Z736 793 aa18.94■□□□□ 0.62
CCDC90B-202ENST00000455220 CCAR1Q8IX12 1150 aaKnown RBP18.94■□□□□ 0.62
CCDC90B-202ENST00000455220 CRYGNQ8WXF5 182 aa18.94■□□□□ 0.62
CCDC90B-202ENST00000455220 PTPREP23469 700 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 SREBF1P36956 1147 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 GRB14Q14449 540 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 INF2Q27J81 1249 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 RILPL1Q5EBL4 403 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 FAM173BQ6P4H8 233 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 FAM133AQ8N9E0 248 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 TBCKQ8TEA7 893 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 TNPO1Q92973 898 aaKnown RBP18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 MGAMO43451 1857 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 EDIL3O43854 480 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 TOB1P50616 345 aaPredicted RBP18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 TAAR1Q96RJ0 339 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 EHMT1Q9H9B1 1298 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 IVNS1ABPQ9Y6Y0 642 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 DOCK3Q8IZD9 2030 aa18.93■□□□□ 0.62
CCDC90B-202ENST00000455220 SLC15A5A6NIM6 579 aa18.92■□□□□ 0.62
CCDC90B-202ENST00000455220 POTEB2H3BUK9 544 aa18.92■□□□□ 0.62
CCDC90B-202ENST00000455220 LACTBP83111 547 aaPredicted RBP18.92■□□□□ 0.62
CCDC90B-202ENST00000455220 NEK8Q86SG6 692 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms